RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 TMEM177Q53S58 311 aa13.15□□□□□ -0.3
COL6A1-206ENST00000498614 LRRC10Q5BKY1 277 aa13.15□□□□□ -0.3
COL6A1-206ENST00000498614 OR2D3Q8NGH3 330 aa13.15□□□□□ -0.3
COL6A1-206ENST00000498614 JKAMPQ9P055 326 aa13.15□□□□□ -0.3
COL6A1-206ENST00000498614 ZNF835Q9Y2P0 537 aa13.15□□□□□ -0.3
COL6A1-206ENST00000498614 IGKV1D-37A0A075B6S9 117 aa13.14□□□□□ -0.31
COL6A1-206ENST00000498614 LHFPL4Q7Z7J7 247 aa13.14□□□□□ -0.31
COL6A1-206ENST00000498614 OR1L4Q8NGR5 311 aa13.14□□□□□ -0.31
COL6A1-206ENST00000498614 ZNF596Q8TC21 504 aa13.14□□□□□ -0.31
COL6A1-206ENST00000498614 RNASE6Q93091 150 aaKnown RBP13.14□□□□□ -0.31
COL6A1-206ENST00000498614 ZNF430Q9H8G1 570 aaPredicted RBP13.14□□□□□ -0.31
COL6A1-206ENST00000498614 LOC105371242A0A075B767 164 aa13.14□□□□□ -0.31
COL6A1-206ENST00000498614 WT1-ASQ06250 92 aa13.14□□□□□ -0.31
COL6A1-206ENST00000498614 LINC00173Q6ZV60 143 aa13.14□□□□□ -0.31
COL6A1-206ENST00000498614 TMEM70Q9BUB7 260 aa13.14□□□□□ -0.31
COL6A1-206ENST00000498614 DYNLRB1Q9NP97 96 aa13.14□□□□□ -0.31
COL6A1-206ENST00000498614 TCRBV4S1A1TA0A5B7 111 aa13.13□□□□□ -0.31
COL6A1-206ENST00000498614 CGB1A6NKQ9 187 aa13.13□□□□□ -0.31
COL6A1-206ENST00000498614 MYCNOSP40205 109 aa13.13□□□□□ -0.31
COL6A1-206ENST00000498614 FOXA3P55318 350 aaPredicted RBP13.13□□□□□ -0.31
COL6A1-206ENST00000498614 LINC00322Q6ZN03 302 aaPredicted RBP13.13□□□□□ -0.31
COL6A1-206ENST00000498614 SSX8Q7RTT4 187 aa13.13□□□□□ -0.31
COL6A1-206ENST00000498614 ATP5L2Q7Z4Y8 100 aa13.13□□□□□ -0.31
COL6A1-206ENST00000498614 OR4C13Q8NGP0 309 aa13.13□□□□□ -0.31
COL6A1-206ENST00000498614 BLNKQ8WV28 456 aa13.13□□□□□ -0.31
COL6A1-206ENST00000498614 CHRDL1Q9BU40 450 aa13.13□□□□□ -0.31
COL6A1-206ENST00000498614 LOXP28300 417 aaPredicted RBP13.13□□□□□ -0.31
COL6A1-206ENST00000498614 LINC00305Q7Z4B0 112 aa13.13□□□□□ -0.31
COL6A1-206ENST00000498614 EPDR1Q9UM22 224 aa13.13□□□□□ -0.31
COL6A1-206ENST00000498614 RPH3ALQ9UNE2 315 aa13.13□□□□□ -0.31
COL6A1-206ENST00000498614 E7EQL1 145 aa13.12□□□□□ -0.31
COL6A1-206ENST00000498614 TNFRSF13BO14836 293 aaPredicted RBP13.12□□□□□ -0.31
COL6A1-206ENST00000498614 PRB1P04280 392 aa13.12□□□□□ -0.31
COL6A1-206ENST00000498614 SLC25A5P05141 298 aaKnown RBP13.12□□□□□ -0.31
COL6A1-206ENST00000498614 BPIFB3P59826 476 aa13.12□□□□□ -0.31
COL6A1-206ENST00000498614 RBPJQ06330 500 aa13.12□□□□□ -0.31
COL6A1-206ENST00000498614 FBLN7Q53RD9 439 aa13.12□□□□□ -0.31
COL6A1-206ENST00000498614 TMEM167AQ8TBQ9 72 aa13.12□□□□□ -0.31
COL6A1-206ENST00000498614 OR4C46A6NHA9 309 aa13.12□□□□□ -0.31
COL6A1-206ENST00000498614 SHISA9B4DS77 424 aa13.12□□□□□ -0.31
COL6A1-206ENST00000498614 ERASQ7Z444 233 aa13.12□□□□□ -0.31
COL6A1-206ENST00000498614 PDPNQ86YL7 162 aa13.12□□□□□ -0.31
COL6A1-206ENST00000498614 TMEM186Q96B77 213 aa13.12□□□□□ -0.31
COL6A1-206ENST00000498614 RITA1Q96K30 269 aa13.12□□□□□ -0.31
COL6A1-206ENST00000498614 TPSG1Q9NRR2 321 aa13.12□□□□□ -0.31
COL6A1-206ENST00000498614 NAV3Q8IVL0 2385 aa13.11□□□□□ -0.31
COL6A1-206ENST00000498614 MOSP00540 346 aa13.11□□□□□ -0.31
COL6A1-206ENST00000498614 IGLV2-23P01705 113 aa13.11□□□□□ -0.31
COL6A1-206ENST00000498614 CA7P43166 264 aa13.11□□□□□ -0.31
COL6A1-206ENST00000498614 HBBP68871 147 aa13.11□□□□□ -0.31
COL6A1-206ENST00000498614 RUSC1-AS1Q66K80 236 aa13.11□□□□□ -0.31
COL6A1-206ENST00000498614 GTSF1Q8WW33 167 aa13.11□□□□□ -0.31
COL6A1-206ENST00000498614 BBC3Q96PG8 261 aaPredicted RBP13.11□□□□□ -0.31
COL6A1-206ENST00000498614 WASHC3Q9Y3C0 194 aa13.11□□□□□ -0.31
COL6A1-206ENST00000498614 IGHV3-72A0A0B4J1Y9 119 aa13.1□□□□□ -0.31
COL6A1-206ENST00000498614 IGHV1-24A0A0C4DH33 117 aa13.1□□□□□ -0.31
COL6A1-206ENST00000498614 IGHV2-70DA0A0C4DH43 119 aa13.1□□□□□ -0.31
COL6A1-206ENST00000498614 hDV102S1A0JD36 115 aa13.1□□□□□ -0.31
COL6A1-206ENST00000498614 PGPA6NDG6 321 aa13.1□□□□□ -0.31
COL6A1-206ENST00000498614 VSTM5A8MXK1 200 aa13.1□□□□□ -0.31
COL6A1-206ENST00000498614 K7EP13 123 aa13.1□□□□□ -0.31
COL6A1-206ENST00000498614 SLC25A17O43808 307 aa13.1□□□□□ -0.31
COL6A1-206ENST00000498614 DLX1P56177 255 aa13.1□□□□□ -0.31
COL6A1-206ENST00000498614 PRB3Q04118 309 aaPredicted RBP13.1□□□□□ -0.31
COL6A1-206ENST00000498614 RPP21Q9H633 154 aaKnown RBP13.1□□□□□ -0.31
COL6A1-206ENST00000498614 ORM2P19652 201 aa13.1□□□□□ -0.31
COL6A1-206ENST00000498614 DLX6P56179 175 aa13.1□□□□□ -0.31
COL6A1-206ENST00000498614 THAP8Q8NA92 274 aa13.1□□□□□ -0.31
COL6A1-206ENST00000498614 VSTM2AQ8TAG5 236 aa13.1□□□□□ -0.31
COL6A1-206ENST00000498614 C22orf15Q8WYQ4 148 aa13.1□□□□□ -0.31
COL6A1-206ENST00000498614 PGLYRP4Q96LB8 373 aa13.1□□□□□ -0.31
COL6A1-206ENST00000498614 INS-IGF2F8WCM5 200 aa13.09□□□□□ -0.31
COL6A1-206ENST00000498614 PLXNB1O43157 2135 aa13.09□□□□□ -0.31
COL6A1-206ENST00000498614 ENSAO43768 121 aaKnown RBP13.09□□□□□ -0.31
COL6A1-206ENST00000498614 MPV17L2Q567V2 206 aa13.09□□□□□ -0.31
COL6A1-206ENST00000498614 LINC00311Q8N616 119 aa13.09□□□□□ -0.31
COL6A1-206ENST00000498614 GPR82Q96P67 336 aa13.09□□□□□ -0.31
COL6A1-206ENST00000498614 MLST8Q9BVC4 326 aa13.09□□□□□ -0.31
COL6A1-206ENST00000498614 KLF12Q9Y4X4 402 aa13.09□□□□□ -0.31
COL6A1-206ENST00000498614 SYS1-DBNDD2H3BUS1 97 aa13.09□□□□□ -0.31
COL6A1-206ENST00000498614 TMEM155Q4W5P6 130 aa13.09□□□□□ -0.31
COL6A1-206ENST00000498614 C22orf46C9J442 243 aa13.08□□□□□ -0.32
COL6A1-206ENST00000498614 H3BTX0 84 aa13.08□□□□□ -0.32
COL6A1-206ENST00000498614 CCL21O00585 134 aa13.08□□□□□ -0.32
COL6A1-206ENST00000498614 CRXO43186 299 aaPredicted RBP13.08□□□□□ -0.32
COL6A1-206ENST00000498614 IGHV1-8P0DP01 117 aa13.08□□□□□ -0.32
COL6A1-206ENST00000498614 UQCRFS1P47985 274 aa13.08□□□□□ -0.32
COL6A1-206ENST00000498614 ZNF137PP52743 207 aa13.08□□□□□ -0.32
COL6A1-206ENST00000498614 FAM71F2Q6NXP2 309 aa13.08□□□□□ -0.32
COL6A1-206ENST00000498614 OR4C5Q8NGB2 326 aa13.08□□□□□ -0.32
COL6A1-206ENST00000498614 OR1B1Q8NGR6 318 aa13.08□□□□□ -0.32
COL6A1-206ENST00000498614 OR4A5Q8NH83 315 aa13.08□□□□□ -0.32
COL6A1-206ENST00000498614 PRSS22Q9GZN4 317 aa13.08□□□□□ -0.32
COL6A1-206ENST00000498614 ST20Q9HBF5 79 aa13.08□□□□□ -0.32
COL6A1-206ENST00000498614 HIVEP3Q5T1R4 2406 aa13.08□□□□□ -0.32
COL6A1-206ENST00000498614 A0A1W2PPI3 338 aa13.07□□□□□ -0.32
COL6A1-206ENST00000498614 LYNX1G3V0Z9 82 aa13.07□□□□□ -0.32
COL6A1-206ENST00000498614 LYNX1P0DP58 116 aa13.07□□□□□ -0.32
COL6A1-206ENST00000498614 VAMP3Q15836 100 aa13.07□□□□□ -0.32
COL6A1-206ENST00000498614 PERPQ96FX8 193 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms