RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 HLA-DRB4P13762 266 aa11.42□□□□□ -0.58
MUC1-220ENST00000498431 RND2P52198 227 aa11.42□□□□□ -0.58
MUC1-220ENST00000498431 AP2S1P53680 142 aaPredicted RBP11.42□□□□□ -0.58
MUC1-220ENST00000498431 SNRPD3P62318 126 aaKnown RBP11.42□□□□□ -0.58
MUC1-220ENST00000498431 SELENOHQ8IZQ5 122 aaKnown RBP11.42□□□□□ -0.58
MUC1-220ENST00000498431 RBPMSQ93062 196 aaKnown RBP11.42□□□□□ -0.58
MUC1-220ENST00000498431 IL22RA2Q969J5 263 aa11.42□□□□□ -0.58
MUC1-220ENST00000498431 MARVELD1Q9BSK0 173 aa11.42□□□□□ -0.58
MUC1-220ENST00000498431 ENY2Q9NPA8 101 aa11.42□□□□□ -0.58
MUC1-220ENST00000498431 NRN1Q9NPD7 142 aa11.42□□□□□ -0.58
MUC1-220ENST00000498431 TMEM56-RWDD3S4R434 201 aa11.42□□□□□ -0.58
MUC1-220ENST00000498431 HLA-DRB4X5D2U9 266 aa11.42□□□□□ -0.58
MUC1-220ENST00000498431 TRAV30A0A087WSZ9 112 aa11.41□□□□□ -0.58
MUC1-220ENST00000498431 SCGB2A1O75556 95 aa11.41□□□□□ -0.58
MUC1-220ENST00000498431 IGKV3-20P01619 116 aa11.41□□□□□ -0.58
MUC1-220ENST00000498431 IL4P05112 153 aa11.41□□□□□ -0.58
MUC1-220ENST00000498431 IL5P05113 134 aa11.41□□□□□ -0.58
MUC1-220ENST00000498431 OR10J1P30954 320 aa11.41□□□□□ -0.58
MUC1-220ENST00000498431 TMEM268Q5VZI3 342 aa11.41□□□□□ -0.58
MUC1-220ENST00000498431 OR1S2Q8NGQ3 325 aa11.41□□□□□ -0.58
MUC1-220ENST00000498431 COQ8AQ8NI60 647 aa11.41□□□□□ -0.58
MUC1-220ENST00000498431 RNASE11Q8TAA1 199 aaKnown RBP11.41□□□□□ -0.58
MUC1-220ENST00000498431 LHFPL5Q8TAF8 219 aa11.41□□□□□ -0.58
MUC1-220ENST00000498431 Q8WTZ3 238 aa11.41□□□□□ -0.58
MUC1-220ENST00000498431 PRR13Q9NZ81 148 aa11.41□□□□□ -0.58
MUC1-220ENST00000498431 DKK2Q9UBU2 259 aa11.41□□□□□ -0.58
MUC1-220ENST00000498431 BUB3O43684 328 aa11.4□□□□□ -0.58
MUC1-220ENST00000498431 PRAF2O60831 178 aa11.4□□□□□ -0.58
MUC1-220ENST00000498431 NXPH3O95157 252 aa11.4□□□□□ -0.58
MUC1-220ENST00000498431 HTN3P15516 51 aa11.4□□□□□ -0.58
MUC1-220ENST00000498431 YPEL3P61236 119 aaPredicted RBP11.4□□□□□ -0.58
MUC1-220ENST00000498431 C1orf134Q5TEV5 83 aa11.4□□□□□ -0.58
MUC1-220ENST00000498431 FAM222AQ5U5X8 452 aa11.4□□□□□ -0.58
MUC1-220ENST00000498431 GSG1LQ6UXU4 331 aa11.4□□□□□ -0.58
MUC1-220ENST00000498431 SIGLEC15Q6ZMC9 328 aa11.4□□□□□ -0.58
MUC1-220ENST00000498431 LRTM2Q8N967 370 aa11.4□□□□□ -0.58
MUC1-220ENST00000498431 ZNF431Q8TF32 576 aaPredicted RBP11.4□□□□□ -0.58
MUC1-220ENST00000498431 TMEM170AQ8WVE7 144 aa11.4□□□□□ -0.58
MUC1-220ENST00000498431 RRNAD1Q96FB5 475 aaKnown RBP11.4□□□□□ -0.58
MUC1-220ENST00000498431 SEC22CQ9BRL7 303 aa11.4□□□□□ -0.58
MUC1-220ENST00000498431 GPN1Q9HCN4 374 aaPredicted RBP11.4□□□□□ -0.58
MUC1-220ENST00000498431 SEPSECSQ9HD40 501 aaKnown RBP11.4□□□□□ -0.58
MUC1-220ENST00000498431 A0A0B4J2A0 478 aa11.39□□□□□ -0.59
MUC1-220ENST00000498431 DUXBA0A1W2PPF3 345 aa11.39□□□□□ -0.59
MUC1-220ENST00000498431 RPS10-NUDT3A0A1W2PQS6 291 aa11.39□□□□□ -0.59
MUC1-220ENST00000498431 TMEM189A5PLL7 270 aa11.39□□□□□ -0.59
MUC1-220ENST00000498431 RNF212Q495C1 297 aa11.39□□□□□ -0.59
MUC1-220ENST00000498431 SOHLH1Q5JUK2 328 aa11.39□□□□□ -0.59
MUC1-220ENST00000498431 FAM219AQ8IW50 185 aa11.39□□□□□ -0.59
MUC1-220ENST00000498431 ZNF709Q8N972 641 aa11.39□□□□□ -0.59
MUC1-220ENST00000498431 FAM210BQ96KR6 192 aa11.39□□□□□ -0.59
MUC1-220ENST00000498431 NIPSNAP3BQ9BS92 247 aa11.39□□□□□ -0.59
MUC1-220ENST00000498431 SHPKQ9UHJ6 478 aa11.39□□□□□ -0.59
MUC1-220ENST00000498431 RFNGQ9Y644 331 aa11.39□□□□□ -0.59
MUC1-220ENST00000498431 SMIM9A6NGZ8 99 aa11.38□□□□□ -0.59
MUC1-220ENST00000498431 HTR2BP41595 481 aa11.38□□□□□ -0.59
MUC1-220ENST00000498431 NKX2-1P43699 371 aaPredicted RBP11.38□□□□□ -0.59
MUC1-220ENST00000498431 SPCS3P61009 180 aa11.38□□□□□ -0.59
MUC1-220ENST00000498431 TNP2Q05952 138 aa11.38□□□□□ -0.59
MUC1-220ENST00000498431 OXA1LQ15070 435 aa11.38□□□□□ -0.59
MUC1-220ENST00000498431 AARDQ4LEZ3 155 aa11.38□□□□□ -0.59
MUC1-220ENST00000498431 TMEM88Q6PEY1 159 aa11.38□□□□□ -0.59
MUC1-220ENST00000498431 LYZL2Q7Z4W2 148 aa11.38□□□□□ -0.59
MUC1-220ENST00000498431 MITD1Q8WV92 249 aa11.38□□□□□ -0.59
MUC1-220ENST00000498431 DNAH5Q8TE73 4624 aa11.37□□□□□ -0.59
MUC1-220ENST00000498431 SNRPGP15A8MWD9 76 aa11.37□□□□□ -0.59
MUC1-220ENST00000498431 SLC25A4P12235 298 aa11.37□□□□□ -0.59
MUC1-220ENST00000498431 C2orf83Q53S99 150 aa11.37□□□□□ -0.59
MUC1-220ENST00000498431 C12orf45Q8N5I9 185 aaPredicted RBP11.37□□□□□ -0.59
MUC1-220ENST00000498431 OR51G1Q8NGK1 321 aa11.37□□□□□ -0.59
MUC1-220ENST00000498431 NPIPB3Q92617 1050 aa11.37□□□□□ -0.59
MUC1-220ENST00000498431 GPR146Q96CH1 333 aa11.37□□□□□ -0.59
MUC1-220ENST00000498431 SLC35B3Q9H1N7 401 aa11.37□□□□□ -0.59
MUC1-220ENST00000498431 HEYLQ9NQ87 328 aaPredicted RBP11.37□□□□□ -0.59
MUC1-220ENST00000498431 TMED3Q9Y3Q3 217 aa11.37□□□□□ -0.59
MUC1-220ENST00000498431 HERC1Q15751 4861 aa11.36□□□□□ -0.59
MUC1-220ENST00000498431 C16orf90A8MZG2 172 aa11.36□□□□□ -0.59
MUC1-220ENST00000498431 TOMM40O96008 361 aa11.36□□□□□ -0.59
MUC1-220ENST00000498431 RD3LP0DJH9 198 aa11.36□□□□□ -0.59
MUC1-220ENST00000498431 PSG1P11464 419 aa11.36□□□□□ -0.59
MUC1-220ENST00000498431 C1orf158Q8N1D5 194 aa11.36□□□□□ -0.59
MUC1-220ENST00000498431 RNASEH2CQ8TDP1 164 aaKnown RBP11.36□□□□□ -0.59
MUC1-220ENST00000498431 ACY3Q96HD9 319 aa11.36□□□□□ -0.59
MUC1-220ENST00000498431 LINC00052Q96N35 136 aa11.36□□□□□ -0.59
MUC1-220ENST00000498431 SAV1Q9H4B6 383 aaPredicted RBP11.36□□□□□ -0.59
MUC1-220ENST00000498431 YTHDF2Q9Y5A9 579 aaKnown RBP11.36□□□□□ -0.59
MUC1-220ENST00000498431 HOXB5P09067 269 aa11.35□□□□□ -0.59
MUC1-220ENST00000498431 NMSQ5H8A3 153 aa11.35□□□□□ -0.59
MUC1-220ENST00000498431 GGNBP1Q5YKI7 109 aa11.35□□□□□ -0.59
MUC1-220ENST00000498431 MAPKAPK5-AS1Q8N8E1 139 aa11.35□□□□□ -0.59
MUC1-220ENST00000498431 SLC24A4Q8NFF2 622 aa11.35□□□□□ -0.59
MUC1-220ENST00000498431 OR4B1Q8NGF8 309 aa11.35□□□□□ -0.59
MUC1-220ENST00000498431 OR52E5Q8NH55 327 aa11.35□□□□□ -0.59
MUC1-220ENST00000498431 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.35□□□□□ -0.59
MUC1-220ENST00000498431 CACNG5Q9UF02 275 aa11.35□□□□□ -0.59
MUC1-220ENST00000498431 TEX48A0A1B0GUV7 120 aa11.34□□□□□ -0.59
MUC1-220ENST00000498431 LOC102723971A0A1B0GUV8 181 aa11.34□□□□□ -0.59
MUC1-220ENST00000498431 C7orf66A4D0T2 115 aa11.34□□□□□ -0.59
MUC1-220ENST00000498431 F6UB75 175 aa11.34□□□□□ -0.59
MUC1-220ENST00000498431 CDK2AP2O75956 126 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms