RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 EXOC3-AS1Q8N2X6 119 aa8.62□□□□□ -1.03
TRAPPC12-223ENST00000497597 STXBP6Q8NFX7 210 aa8.62□□□□□ -1.03
TRAPPC12-223ENST00000497597 SVIPQ8NHG7 77 aa8.62□□□□□ -1.03
TRAPPC12-223ENST00000497597 NEU4Q8WWR8 484 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC12-223ENST00000497597 F2RL2O00254 374 aa8.62□□□□□ -1.03
TRAPPC12-223ENST00000497597 DKK1O94907 266 aa8.62□□□□□ -1.03
TRAPPC12-223ENST00000497597 CYC1P08574 325 aa8.62□□□□□ -1.03
TRAPPC12-223ENST00000497597 KLF5Q13887 457 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC12-223ENST00000497597 FAM120AOSQ5T036 256 aa8.62□□□□□ -1.03
TRAPPC12-223ENST00000497597 OR5A1Q8NGJ0 315 aa8.62□□□□□ -1.03
TRAPPC12-223ENST00000497597 CALYQ9NYX4 217 aa8.62□□□□□ -1.03
TRAPPC12-223ENST00000497597 SMAD7O15105 426 aaKnown RBP8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 FXYD2P54710 66 aa8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 KRTAP27-1Q3LI81 207 aa8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 ANXA2RQ3ZCQ2 193 aa8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 Q71RC1 249 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 CD177Q8N6Q3 437 aa8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 SLC25A2Q9BXI2 301 aa8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 DMXL2Q8TDJ6 3036 aa8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 PPP1R32Q7Z5V6 425 aa8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 GTSCR1Q86UQ5 136 aa8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 GEMIN7Q9H840 131 aaKnown RBP8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 PRNDQ9UKY0 176 aa8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 ABCA4P78363 2273 aa8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 A0A1B0GUT8 65 aa8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 ZNF418Q8TF45 676 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 ZNF747Q9BV97 191 aa8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 COL25A1Q9BXS0 654 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 DKK2Q9UBU2 259 aa8.61□□□□□ -1.03
TRAPPC12-223ENST00000497597 D6R8Y8 96 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 OR2J3O76001 311 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 TNFSF15O95150 251 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 FTH1P19P0C7X4 201 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 ERVK11-1P61568 191 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 RIGQ13278 110 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 CXXC4Q9H2H0 198 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 TMEM160Q9NX00 188 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 APC2O95996 2303 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 LOC107984156A0A0G2JMH3 177 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 NKX2-8O15522 239 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 CD69Q07108 199 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 ARL17AQ8IVW1 177 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 PRO3102Q9H379 93 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 RBP4P02753 201 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 CT45A1Q5HYN5 189 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 DUX4L9Q6RFH8 374 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 C1orf229Q6ZS94 237 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 CT45A3Q8NHU0 189 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 PRELID3AQ96N28 172 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 S4R3C0 116 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 TACC2O95359 2948 aa8.6□□□□□ -1.03
TRAPPC12-223ENST00000497597 PRSS46E5RG02 174 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 SAA1P0DJI8 122 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 CT45A6P0DMU7 189 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 CT45A5P0DMU8 189 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 CT45A10P0DMU9 189 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 CT45A7P0DMV0 189 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 CKS2P33552 79 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 AMN1Q8IY45 258 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 FAM222BQ8WU58 562 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 ZNF479Q96JC4 524 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 Q9H3A6 140 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 AGRNO00468 2067 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 TMEM213A2RRL7 107 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 H3BVH4 76 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 SP9P0CG40 484 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 INSL3P51460 131 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 Q0VFX4 171 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 CD300EQ496F6 205 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 UBALD2Q8IYN6 164 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 SS18L2Q9UHA2 77 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 RALYQ9UKM9 306 aaKnown RBP8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 LRP4O75096 1905 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 MUC3AQ02505 3323 aa8.59□□□□□ -1.03
TRAPPC12-223ENST00000497597 ATMQ13315 3056 aa8.59□□□□□ -1.04
TRAPPC12-223ENST00000497597 PSMB11A5LHX3 300 aa8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 SRRM4A7MD48 611 aaKnown RBP8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 MGST3O14880 152 aa8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 LTAP01374 205 aa8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 RASL11AQ6T310 242 aa8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 ATP5L2Q7Z4Y8 100 aa8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 WDR31Q8NA23 367 aa8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 IFI27L1Q96BM0 104 aa8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 CCL13Q99616 98 aa8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 MGAQ8IWI9 3026 aa8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 LINC01545Q5VT33 79 aa8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 UFSP1Q6NVU6 142 aa8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 WIPF2Q8TF74 440 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 FAM167A-AS1Q96KT0 104 aa8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 HIST1H4GQ99525 98 aa8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 TTTY12Q9BZ98 90 aa8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 EVI2AP22794 236 aa8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 MBNL2Q5VZF2 373 aaKnown RBP8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 KLK15Q9H2R5 256 aa8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 JPT1Q9UK76 154 aa8.58□□□□□ -1.04
TRAPPC12-223ENST00000497597 ARL3P36405 182 aa8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 NRN1LQ496H8 165 aa8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 OR1L8Q8NGR8 309 aa8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 MRPL32Q9BYC8 188 aaKnown RBP8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 C19orf67A6NJJ6 358 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms