RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	AMBP	P02760	352 aa		3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	ZNF705D	P0CH99	300 aa	Predicted RBP	3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	ZNF705B	P0CI00	300 aa	Predicted RBP	3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	NPY1R	P25929	384 aa		3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	HLA-DMB	P28068	263 aa		3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	OR10J1	P30954	320 aa		3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	NPBWR1	P48145	328 aa		3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	YPEL3	P61236	119 aa	Predicted RBP	3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	SUMO2	P61956	95 aa	Known RBP	3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	ERH	P84090	104 aa	Known RBP	3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	ZNF90	Q03938	601 aa		3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	SSBP1	Q04837	148 aa	Known RBP	3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	SURF2	Q15527	256 aa	Predicted RBP	3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	TRIM16L	Q309B1	348 aa		3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	ACTL10	Q5JWF8	245 aa		3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	MORN5	Q5VZ52	161 aa		3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	ZNF705A	Q6ZN79	300 aa	Predicted RBP	3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	TMEM182	Q6ZP80	229 aa	Predicted RBP	3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	LYZL2	Q7Z4W2	148 aa		3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	CCDC71L	Q8N9Z2	235 aa		3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	OR1S2	Q8NGQ3	325 aa		3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	RPL36AL	Q969Q0	106 aa	Known RBP	3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	MRPS26	Q9BYN8	205 aa	Known RBP	3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	RBM38	Q9H0Z9	239 aa	Known RBP	3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	RBKS	Q9H477	322 aa		3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	VCX3A	Q9NNX9	186 aa		3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	COPZ2	Q9P299	210 aa		3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	RABAC1	Q9UI14	185 aa		3.92	□□□□□ -1.78
UBE3C-208	ENST00000497368	MYCBP2	O75592	4640 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	IGHV4-4	A0A075B6R2	117 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368		F6UB75	175 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	IL4	P05112	153 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	AKAIN1	P0CW23	69 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	SPP1	P10451	314 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	PSG1	P11464	419 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	HLA-DRB4	P13762	266 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	HTR2B	P41595	481 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	TIRAP	P58753	221 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	PSMG4	Q5JS54	123 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	AMTN	Q6UX39	209 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	CLVS1	Q8IUQ0	354 aa	Predicted RBP	3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	THAP8	Q8NA92	274 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	OR51G1	Q8NGK1	321 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	RNASEH2C	Q8TDP1	164 aa	Known RBP	3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	AP3S1	Q92572	193 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	NPIPB3	Q92617	1050 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	IL22RA2	Q969J5	263 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	METTL26	Q96S19	204 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	RAB40C	Q96S21	281 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	KLK5	Q9Y337	293 aa	Predicted RBP	3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	HLA-DRB4	X5D2U9	266 aa		3.91	□□□□□ -1.78
UBE3C-208	ENST00000497368	TRAV8-2	A0A0B4J237	113 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368		A0A0B4J2A0	478 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	SMIM31	A0A1B0GVY4	71 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	PLAC8L1	A1L4L8	177 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	HELT	A6NFD8	242 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	PMS2P5	A8MQ11	134 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	CRX	O43186	299 aa	Predicted RBP	3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	B3GALNT1	O75752	331 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	CCNK	O75909	580 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	PRM2	P04554	102 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	SULT1A3	P0DMM9	295 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	SULT1A4	P0DMN0	295 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	PRB4	P10163	310 aa	Predicted RBP	3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	MIF	P14174	115 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	NPPC	P23582	126 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	TNFSF8	P32971	234 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	BTC	P35070	178 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	SNCA	P37840	140 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	FXYD7	P58549	80 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	MRPS10	P82664	201 aa	Known RBP	3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	DHRS2	Q13268	280 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	GAMT	Q14353	236 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	MZT2A	Q6P582	158 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	MORN3	Q6PF18	240 aa	Predicted RBP	3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	SIGLEC15	Q6ZMC9	328 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	STH	Q8IWL8	128 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	C1orf158	Q8N1D5	194 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	TMEM217	Q8N7C4	229 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	ZFAND1	Q8TCF1	268 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	DTD1	Q8TEA8	209 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	C2CD4C	Q8TF44	421 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	RNF125	Q96EQ8	232 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	RRNAD1	Q96FB5	475 aa	Known RBP	3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	ACY3	Q96HD9	319 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	SDHC	Q99643	169 aa	Predicted RBP	3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	SLC35B3	Q9H1N7	401 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	SLC25A32	Q9H2D1	315 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	SAV1	Q9H4B6	383 aa	Predicted RBP	3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	NRN1	Q9NPD7	142 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	HEYL	Q9NQ87	328 aa	Predicted RBP	3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	SHPK	Q9UHJ6	478 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	HERC1	Q15751	4861 aa		3.9	□□□□□ -1.79
UBE3C-208	ENST00000497368	CEBPZOS	A8MTT3	80 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	IGLL5	B9A064	214 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	DISC1	C4P0D8	188 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	DNASE2	O00115	360 aa	Predicted RBP	3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	MRPS12	O15235	138 aa	Known RBP	3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	RGS5	O15539	181 aa		3.89	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms