RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 ACP1P24666 158 aa10.44□□□□□ -0.74
VEGFA-215ENST00000497139 IFI27L1Q96BM0 104 aa10.44□□□□□ -0.74
VEGFA-215ENST00000497139 METRNQ9UJH8 293 aa10.44□□□□□ -0.74
VEGFA-215ENST00000497139 ERHP84090 104 aaKnown RBP10.44□□□□□ -0.74
VEGFA-215ENST00000497139 PRR31Q5SQ13 230 aa10.44□□□□□ -0.74
VEGFA-215ENST00000497139 Q86TA4 180 aa10.44□□□□□ -0.74
VEGFA-215ENST00000497139 DCTN5Q9BTE1 182 aa10.44□□□□□ -0.74
VEGFA-215ENST00000497139 CHAC1Q9BUX1 264 aa10.44□□□□□ -0.74
VEGFA-215ENST00000497139 PRO3102Q9H379 93 aa10.44□□□□□ -0.74
VEGFA-215ENST00000497139 MRPS17Q9Y2R5 130 aaKnown RBP10.44□□□□□ -0.74
VEGFA-215ENST00000497139 SERTM2A0A1B0GWG4 89 aa10.43□□□□□ -0.74
VEGFA-215ENST00000497139 IGLL5B9A064 214 aa10.43□□□□□ -0.74
VEGFA-215ENST00000497139 KLRD1Q13241 179 aa10.43□□□□□ -0.74
VEGFA-215ENST00000497139 EDDM3AQ14507 147 aa10.43□□□□□ -0.74
VEGFA-215ENST00000497139 TMEM95Q3KNT9 176 aa10.43□□□□□ -0.74
VEGFA-215ENST00000497139 GAGE13Q4V321 117 aa10.43□□□□□ -0.74
VEGFA-215ENST00000497139 ZNF826PQ6ZT77 177 aa10.43□□□□□ -0.74
VEGFA-215ENST00000497139 LINC00305Q7Z4B0 112 aa10.43□□□□□ -0.74
VEGFA-215ENST00000497139 CEND1Q8N111 149 aa10.43□□□□□ -0.74
VEGFA-215ENST00000497139 SAA2P0DJI9 122 aaPredicted RBP10.43□□□□□ -0.74
VEGFA-215ENST00000497139 PRDX2P32119 198 aa10.43□□□□□ -0.74
VEGFA-215ENST00000497139 IFI27P40305 119 aaPredicted RBP10.43□□□□□ -0.74
VEGFA-215ENST00000497139 CD177Q8N6Q3 437 aa10.43□□□□□ -0.74
VEGFA-215ENST00000497139 CNTRLQ7Z7A1 2325 aa10.43□□□□□ -0.74
VEGFA-215ENST00000497139 A0A1W2PQM1 296 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 SLC25A17O43808 307 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 PAX8Q06710 450 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 MZT1Q08AG7 82 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 ALKBH6Q3KRA9 238 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 ABHD17BQ5VST6 288 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 C8orf86Q6ZUL3 223 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 RBMXL3Q8N7X1 1067 aaKnown RBP10.42□□□□□ -0.74
VEGFA-215ENST00000497139 ZNF479Q96JC4 524 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 RITA1Q96K30 269 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 B4GALT7Q9UBV7 327 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 FBLL1A6NHQ2 334 aaKnown RBP10.42□□□□□ -0.74
VEGFA-215ENST00000497139 KLRC4-KLRK1H3BQV0 150 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 KLK10O43240 276 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 MYOD1P15172 320 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 MPV17P39210 176 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 ETDBQ3ZM63 59 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 ZMAT4Q9H898 229 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 ASCC3Q8N3C0 2202 aaKnown RBP10.42□□□□□ -0.74
VEGFA-215ENST00000497139 FREM1Q5H8C1 2179 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 HOXB4P17483 251 aaPredicted RBP10.42□□□□□ -0.74
VEGFA-215ENST00000497139 SUB1P53999 127 aaKnown RBP eCLIP10.42□□□□□ -0.74
VEGFA-215ENST00000497139 MLANAQ16655 118 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 C1orf229Q6ZS94 237 aaPredicted RBP10.42□□□□□ -0.74
VEGFA-215ENST00000497139 VCX2Q9H322 139 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 CALYQ9NYX4 217 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 PRO0461Q9UI25 63 aa10.42□□□□□ -0.74
VEGFA-215ENST00000497139 F11RQ9Y624 299 aaKnown RBP10.42□□□□□ -0.74
VEGFA-215ENST00000497139 IGHV3-64DA0A0J9YX35 117 aa10.41□□□□□ -0.74
VEGFA-215ENST00000497139 THBDP07204 575 aa10.41□□□□□ -0.74
VEGFA-215ENST00000497139 ARMS2P0C7Q2 107 aa10.41□□□□□ -0.74
VEGFA-215ENST00000497139 FOLR3P41439 243 aa10.41□□□□□ -0.74
VEGFA-215ENST00000497139 CYB561P49447 251 aa10.41□□□□□ -0.74
VEGFA-215ENST00000497139 TMEM30BQ3MIR4 351 aa10.41□□□□□ -0.74
VEGFA-215ENST00000497139 CXorf67Q86X51 503 aaPredicted RBP10.41□□□□□ -0.74
VEGFA-215ENST00000497139 ZCCHC24Q8N2G6 241 aaKnown RBP10.41□□□□□ -0.74
VEGFA-215ENST00000497139 RND1Q92730 232 aa10.41□□□□□ -0.74
VEGFA-215ENST00000497139 C18orf15Q96N68 181 aa10.41□□□□□ -0.74
VEGFA-215ENST00000497139 OTORQ9NRC9 128 aa10.41□□□□□ -0.74
VEGFA-215ENST00000497139 NDUFA4L2Q9NRX3 87 aa10.41□□□□□ -0.74
VEGFA-215ENST00000497139 LINC00312Q9Y6C7 94 aa10.41□□□□□ -0.74
VEGFA-215ENST00000497139 CELA3AP09093 270 aa10.41□□□□□ -0.74
VEGFA-215ENST00000497139 ORMDL3Q8N138 153 aa10.41□□□□□ -0.74
VEGFA-215ENST00000497139 KLF14Q8TD94 323 aaPredicted RBP10.41□□□□□ -0.74
VEGFA-215ENST00000497139 ARPC1AQ92747 370 aa10.41□□□□□ -0.74
VEGFA-215ENST00000497139 NHP2Q9NX24 153 aaKnown RBP10.41□□□□□ -0.74
VEGFA-215ENST00000497139 ERG28Q9UKR5 140 aa10.41□□□□□ -0.74
VEGFA-215ENST00000497139 COL6A3P12111 3177 aa10.41□□□□□ -0.74
VEGFA-215ENST00000497139 VCANP13611 3396 aa10.4□□□□□ -0.74
VEGFA-215ENST00000497139 IGKV1D-37A0A075B6S9 117 aa10.4□□□□□ -0.74
VEGFA-215ENST00000497139 PINLYPA6NC86 204 aa10.4□□□□□ -0.74
VEGFA-215ENST00000497139 CGB3P0DN86 165 aa10.4□□□□□ -0.74
VEGFA-215ENST00000497139 CGB7P0DN87 165 aa10.4□□□□□ -0.74
VEGFA-215ENST00000497139 PRELID3AQ96N28 172 aa10.4□□□□□ -0.74
VEGFA-215ENST00000497139 FAM173AQ9BQD7 235 aa10.4□□□□□ -0.74
VEGFA-215ENST00000497139 Q9H3A6 140 aa10.4□□□□□ -0.74
VEGFA-215ENST00000497139 TFF1P04155 84 aa10.4□□□□□ -0.75
VEGFA-215ENST00000497139 GP9P14770 177 aa10.4□□□□□ -0.75
VEGFA-215ENST00000497139 GUSBP11Q6P575 273 aa10.4□□□□□ -0.75
VEGFA-215ENST00000497139 SH2D6Q7Z4S9 175 aa10.4□□□□□ -0.75
VEGFA-215ENST00000497139 SGK494Q96LW2 274 aa10.4□□□□□ -0.75
VEGFA-215ENST00000497139 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.39□□□□□ -0.75
VEGFA-215ENST00000497139 NDUFS7O75251 213 aa10.39□□□□□ -0.75
VEGFA-215ENST00000497139 EVI2AP22794 236 aa10.39□□□□□ -0.75
VEGFA-215ENST00000497139 C1QTNF4Q9BXJ3 329 aa10.39□□□□□ -0.75
VEGFA-215ENST00000497139 CACNA1DQ01668 2161 aa10.39□□□□□ -0.75
VEGFA-215ENST00000497139 K7ERJ3 54 aa10.39□□□□□ -0.75
VEGFA-215ENST00000497139 FAM106CPP0CH98 169 aa10.39□□□□□ -0.75
VEGFA-215ENST00000497139 LOXL1Q08397 574 aaPredicted RBP10.39□□□□□ -0.75
VEGFA-215ENST00000497139 FAM106AQ4KMX7 169 aa10.39□□□□□ -0.75
VEGFA-215ENST00000497139 TM4SF20Q53R12 229 aa10.39□□□□□ -0.75
VEGFA-215ENST00000497139 OSR1Q8TAX0 266 aaPredicted RBP10.39□□□□□ -0.75
VEGFA-215ENST00000497139 NPIPB3Q92617 1050 aa10.39□□□□□ -0.75
VEGFA-215ENST00000497139 TRBV25-1A0A075B6N4 114 aa10.38□□□□□ -0.75
VEGFA-215ENST00000497139 H3BMG7 143 aa10.38□□□□□ -0.75
VEGFA-215ENST00000497139 SPINK8P0C7L1 97 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms