RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 K7N7A8 449 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 NDUFS7O75251 213 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 CST7O76096 145 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 CLDN14O95500 239 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 SPINK8P0C7L1 97 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 CCL3L1P16619 93 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 GNG4P50150 75 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 DPPA3Q6W0C5 159 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 TCF23Q7RTU1 214 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 NUP37Q8NFH4 326 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 CABLES2Q9BTV7 478 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 KCNJ16Q9NPI9 418 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 TMEM106BQ9NUM4 274 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 TNCP24821 2201 aa5□□□□□ -1.61
SSBP1-213ENST00000496622 NBPF19A0A087WUL8 3843 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 TRBV6-6A0A0A6YYG2 114 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 IGHV2-26A0A0B4J1V2 119 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 LOC107984640A0A0U1RRK4 108 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 FAM24AA6NFZ4 105 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 CGB1A6NKQ9 187 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 J3QR06 171 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 SSSCA1O60232 199 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 IGKV1-5P01602 117 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 SLC25A4P12235 298 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 COL8A2P25067 703 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 G6PCP35575 357 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 SLC35E4Q6ICL7 350 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 H2BFWTQ7Z2G1 175 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 OR4F5Q8NH21 305 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 IGFBPL1Q8WX77 278 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 CYTL1Q9NRR1 136 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 RCL1Q9Y2P8 373 aaKnown RBP4.99□□□□□ -1.61
SSBP1-213ENST00000496622 C19orf84I3L1E1 186 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 DEDDO75618 318 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 NHLRC4P0CG21 123 aaPredicted RBP4.99□□□□□ -1.61
SSBP1-213ENST00000496622 RPL12P30050 165 aaKnown RBP4.99□□□□□ -1.61
SSBP1-213ENST00000496622 CYCSP99999 105 aaKnown RBP4.99□□□□□ -1.61
SSBP1-213ENST00000496622 MEF2CQ06413 473 aaPredicted RBP4.99□□□□□ -1.61
SSBP1-213ENST00000496622 CATR1Q13166 79 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 GAFA1Q96PS6 74 aa4.99□□□□□ -1.61
SSBP1-213ENST00000496622 SLC25A10Q9UBX3 287 aaPredicted RBP4.99□□□□□ -1.61
SSBP1-213ENST00000496622 A0A1B0GV50 99 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 A0A1W2PPI3 338 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 A8MZ25 164 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 MGST3O14880 152 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 CHST1O43916 411 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 IAPPP10997 89 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 TCTAP57738 103 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 LOXL3P58215 753 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 NMSQ5H8A3 153 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 STUMQ69YW2 141 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 DEFB125Q8N687 156 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 H1FXQ92522 213 aaKnown RBP4.98□□□□□ -1.61
SSBP1-213ENST00000496622 LINC00477Q96M19 166 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 DUX3Q96PT4 197 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 EIF5A2Q9GZV4 153 aaKnown RBP4.98□□□□□ -1.61
SSBP1-213ENST00000496622 CTSZQ9UBR2 303 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 CACNG5Q9UF02 275 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 NAT8BQ9UHF3 227 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 PLXNB1O43157 2135 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 IGFBP2P18065 325 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 VDAC1P21796 283 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 ATP6V0CP27449 155 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 PPIFP30405 207 aaKnown RBP4.98□□□□□ -1.61
SSBP1-213ENST00000496622 NKX2-1P43699 371 aaPredicted RBP4.98□□□□□ -1.61
SSBP1-213ENST00000496622 REG1BP48304 166 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 GNB2P62879 340 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 ATP5G2Q06055 141 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 TFF3Q07654 80 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 DIAPH2-AS1Q14236 149 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 C17orf58Q2M2W7 97 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 C1orf174Q8IYL3 243 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 OR13C6PQ8NH95 151 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 GRAMD2BQ96HH9 432 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 SH3BGRL3Q9H299 93 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 CALYQ9NYX4 217 aa4.98□□□□□ -1.61
SSBP1-213ENST00000496622 C7orf71A4D174 169 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 TMEM178BH3BS89 294 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 J3QR89 54 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 SPINT2O43291 252 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 HRASP01112 189 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 CD99P14209 185 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 P2RY1P47900 373 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 CT45A1Q5HYN5 189 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 ADAMTSL5Q6ZMM2 481 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 Q6ZRG5 221 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 Q6ZWC4 215 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 MOB1BQ7L9L4 216 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 ODF3L1Q8IXM7 274 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 LRTM2Q8N967 370 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 OR5AN1Q8NGI8 311 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 CT45A3Q8NHU0 189 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 DDB2Q92466 427 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 SLC35B3Q9H1N7 401 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 MAP1LC3AQ9H492 121 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 PATZ1Q9HBE1 687 aaKnown RBP4.97□□□□□ -1.61
SSBP1-213ENST00000496622 INSIG2Q9Y5U4 225 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 CCDC168Q8NDH2 2452 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 CSPG4Q6UVK1 2322 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 KBTBD11-OT1A0A1B0GTJ5 212 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms