RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ARV1Q9H2C2 271 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 TMA7Q9Y2S6 64 aaKnown RBP6.69□□□□□ -1.34
U2AF1-212ENST00000496462 IGSF23A1L1A6 192 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 K7EIM0 57 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 PSG1P11464 419 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 SRSF4Q08170 494 aaKnown RBP6.69□□□□□ -1.34
U2AF1-212ENST00000496462 DEFB121Q5J5C9 76 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 KCNRGQ8N5I3 272 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 RNF152Q8N8N0 203 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 WDR61Q9GZS3 305 aaKnown RBP6.69□□□□□ -1.34
U2AF1-212ENST00000496462 DEFB136Q30KP8 78 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 Q6ZS46 218 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 LINC00052Q96N35 136 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 CITED1Q99966 193 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 PRELID1Q9Y255 219 aa6.69□□□□□ -1.34
U2AF1-212ENST00000496462 IGHV7-4-1A0A0J9YVY3 117 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 DUSP14O95147 198 aaKnown RBP6.68□□□□□ -1.34
U2AF1-212ENST00000496462 C8orf88P0DMB2 117 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 TSPOP30536 169 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 SLURP1P55000 103 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 UBE2L3P68036 154 aaKnown RBP6.68□□□□□ -1.34
U2AF1-212ENST00000496462 LCN15Q6UWW0 184 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 TOMM20LQ6UXN7 152 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 IL34Q6ZMJ4 242 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 FAM213BQ8TBF2 198 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 OR11H12B2RN74 326 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 FOLR2P14207 255 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 DEFA5Q01523 94 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 MIC13Q5XKP0 118 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 DPPA3Q6W0C5 159 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 SIGLEC15Q6ZMC9 328 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 RXFP4Q8TDU9 374 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 RNF141Q8WVD5 230 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 SPAG8Q99932 426 aaPredicted RBP6.68□□□□□ -1.34
U2AF1-212ENST00000496462 RPRMQ9NS64 109 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 SMPXQ9UHP9 88 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 H2AFB1P0C5Y9 115 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 THAP8Q8NA92 274 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 OR10J6PQ8NGY7 276 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 PAXXQ9BUH6 204 aa6.68□□□□□ -1.34
U2AF1-212ENST00000496462 NKX6-2Q9C056 277 aaPredicted RBP6.68□□□□□ -1.34
U2AF1-212ENST00000496462 ANK3Q12955 4377 aaKnown RBP6.68□□□□□ -1.34
U2AF1-212ENST00000496462 EGR2P11161 476 aaPredicted RBP6.67□□□□□ -1.34
U2AF1-212ENST00000496462 TMEM41BQ5BJD5 291 aa6.67□□□□□ -1.34
U2AF1-212ENST00000496462 TMEM182Q6ZP80 229 aaPredicted RBP6.67□□□□□ -1.34
U2AF1-212ENST00000496462 TMEM208Q9BTX3 173 aa6.67□□□□□ -1.34
U2AF1-212ENST00000496462 SLC25A32Q9H2D1 315 aa6.67□□□□□ -1.34
U2AF1-212ENST00000496462 IGLC1P0CG04 106 aa6.67□□□□□ -1.34
U2AF1-212ENST00000496462 LINC00305Q7Z4B0 112 aa6.67□□□□□ -1.34
U2AF1-212ENST00000496462 NPCDR1Q9BY65 106 aa6.67□□□□□ -1.34
U2AF1-212ENST00000496462 SEC11BP0C7V7 166 aa6.67□□□□□ -1.34
U2AF1-212ENST00000496462 PSMB3P49720 205 aa6.67□□□□□ -1.34
U2AF1-212ENST00000496462 ZNF738Q8NE65 137 aa6.67□□□□□ -1.34
U2AF1-212ENST00000496462 IGHV3-49A0A0A0MS15 119 aa6.67□□□□□ -1.34
U2AF1-212ENST00000496462 CTXND1A0A1B0GTU2 59 aa6.67□□□□□ -1.34
U2AF1-212ENST00000496462 CXorf1O96002 111 aa6.67□□□□□ -1.34
U2AF1-212ENST00000496462 ASPHD1Q5U4P2 390 aa6.67□□□□□ -1.34
U2AF1-212ENST00000496462 STHQ8IWL8 128 aa6.67□□□□□ -1.34
U2AF1-212ENST00000496462 DUX3Q96PT4 197 aa6.67□□□□□ -1.34
U2AF1-212ENST00000496462 RSG1Q9BU20 258 aa6.67□□□□□ -1.34
U2AF1-212ENST00000496462 PARD6GQ9BYG4 376 aaPredicted RBP6.67□□□□□ -1.34
U2AF1-212ENST00000496462 GP9P14770 177 aa6.66□□□□□ -1.34
U2AF1-212ENST00000496462 LGALSLQ3ZCW2 172 aaPredicted RBP6.66□□□□□ -1.34
U2AF1-212ENST00000496462 CST9LP1Q5W188 147 aa6.66□□□□□ -1.34
U2AF1-212ENST00000496462 UBQLN2Q9UHD9 624 aa6.66□□□□□ -1.34
U2AF1-212ENST00000496462 IGHV3OR16-13A0A075B7E8 117 aa6.66□□□□□ -1.34
U2AF1-212ENST00000496462 IGHV3-74A0A0B4J1X5 117 aa6.66□□□□□ -1.34
U2AF1-212ENST00000496462 C2orf70A6NJV1 201 aa6.66□□□□□ -1.34
U2AF1-212ENST00000496462 CTSGP08311 255 aa6.66□□□□□ -1.34
U2AF1-212ENST00000496462 CBLN1P23435 193 aa6.66□□□□□ -1.34
U2AF1-212ENST00000496462 CFHR3Q02985 330 aa6.66□□□□□ -1.34
U2AF1-212ENST00000496462 SPATA31B1PQ5VZV4 182 aa6.66□□□□□ -1.34
U2AF1-212ENST00000496462 RPL7L1Q6DKI1 246 aaKnown RBP6.66□□□□□ -1.34
U2AF1-212ENST00000496462 SFT2D1Q8WV19 159 aa6.66□□□□□ -1.34
U2AF1-212ENST00000496462 DLX4Q92988 240 aaPredicted RBP6.66□□□□□ -1.34
U2AF1-212ENST00000496462 C1QTNF4Q9BXJ3 329 aa6.66□□□□□ -1.34
U2AF1-212ENST00000496462 ATP6V0CP27449 155 aa6.66□□□□□ -1.34
U2AF1-212ENST00000496462 OR51M1Q9H341 326 aa6.66□□□□□ -1.34
U2AF1-212ENST00000496462 FUT9Q9Y231 359 aa6.66□□□□□ -1.34
U2AF1-212ENST00000496462 ZNF256Q9Y2P7 627 aaPredicted RBP6.66□□□□□ -1.34
U2AF1-212ENST00000496462 ZNF705EA8MWA4 302 aaPredicted RBP6.65□□□□□ -1.34
U2AF1-212ENST00000496462 E7EUB6 86 aa6.65□□□□□ -1.34
U2AF1-212ENST00000496462 I3L521 148 aa6.65□□□□□ -1.34
U2AF1-212ENST00000496462 CT45A10P0DMU9 189 aa6.65□□□□□ -1.34
U2AF1-212ENST00000496462 UBE2G1P62253 170 aa6.65□□□□□ -1.34
U2AF1-212ENST00000496462 PHYHIPLQ96FC7 376 aa6.65□□□□□ -1.34
U2AF1-212ENST00000496462 NEURL2Q9BR09 285 aa6.65□□□□□ -1.34
U2AF1-212ENST00000496462 IGHV3OR16-8A0A075B7F1 116 aa6.65□□□□□ -1.35
U2AF1-212ENST00000496462 APOC4P55056 127 aa6.65□□□□□ -1.35
U2AF1-212ENST00000496462 KLF5Q13887 457 aaPredicted RBP6.65□□□□□ -1.35
U2AF1-212ENST00000496462 BSXQ3C1V8 233 aa6.65□□□□□ -1.35
U2AF1-212ENST00000496462 C10orf99Q6UWK7 81 aa6.65□□□□□ -1.35
U2AF1-212ENST00000496462 GBGT1Q8N5D6 347 aa6.65□□□□□ -1.35
U2AF1-212ENST00000496462 BLNKQ8WV28 456 aa6.65□□□□□ -1.35
U2AF1-212ENST00000496462 ST8SIA2Q92186 375 aa6.65□□□□□ -1.35
U2AF1-212ENST00000496462 FNDC4Q9H6D8 234 aaPredicted RBP6.65□□□□□ -1.35
U2AF1-212ENST00000496462 NRN1Q9NPD7 142 aa6.65□□□□□ -1.35
U2AF1-212ENST00000496462 BIN3Q9NQY0 253 aa6.65□□□□□ -1.35
U2AF1-212ENST00000496462 RPH3ALQ9UNE2 315 aa6.65□□□□□ -1.35
U2AF1-212ENST00000496462 FBLL1A6NHQ2 334 aaKnown RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms