RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 NRN1Q9NPD7 142 aa12.9□□□□□ -0.34
RHBDD3-207ENST00000496342 KIR2DL5BA0A0G2JN68 375 aa12.89□□□□□ -0.35
RHBDD3-207ENST00000496342 KIR2DL5BA0A0G2JPC4 375 aa12.89□□□□□ -0.35
RHBDD3-207ENST00000496342 SPRY2O43597 315 aa12.89□□□□□ -0.35
RHBDD3-207ENST00000496342 LYL1P12980 280 aa12.89□□□□□ -0.35
RHBDD3-207ENST00000496342 CAV2P51636 162 aa12.89□□□□□ -0.35
RHBDD3-207ENST00000496342 IL15RAQ13261 267 aa12.89□□□□□ -0.35
RHBDD3-207ENST00000496342 KIR2DL5AQ8N109 375 aa12.89□□□□□ -0.35
RHBDD3-207ENST00000496342 BPIFCQ8NFQ6 507 aa12.89□□□□□ -0.35
RHBDD3-207ENST00000496342 KIR2DL5BQ8NHK3 375 aa12.89□□□□□ -0.35
RHBDD3-207ENST00000496342 SLC25A32Q9H2D1 315 aa12.89□□□□□ -0.35
RHBDD3-207ENST00000496342 SLC25A22Q9H936 323 aa12.89□□□□□ -0.35
RHBDD3-207ENST00000496342 CST7O76096 145 aa12.88□□□□□ -0.35
RHBDD3-207ENST00000496342 CA1P00915 261 aaPredicted RBP12.88□□□□□ -0.35
RHBDD3-207ENST00000496342 EWSR1Q01844 656 aaKnown RBP eCLIP12.88□□□□□ -0.35
RHBDD3-207ENST00000496342 ACTL10Q5JWF8 245 aa12.88□□□□□ -0.35
RHBDD3-207ENST00000496342 Q6ZWC4 215 aa12.88□□□□□ -0.35
RHBDD3-207ENST00000496342 STHQ8IWL8 128 aa12.88□□□□□ -0.35
RHBDD3-207ENST00000496342 RNF183Q96D59 192 aa12.88□□□□□ -0.35
RHBDD3-207ENST00000496342 SCRT1Q9BWW7 348 aa12.88□□□□□ -0.35
RHBDD3-207ENST00000496342 CSTL1Q9H114 145 aa12.88□□□□□ -0.35
RHBDD3-207ENST00000496342 GPN1Q9HCN4 374 aaPredicted RBP12.88□□□□□ -0.35
RHBDD3-207ENST00000496342 MGAT4CQ9UBM8 478 aa12.88□□□□□ -0.35
RHBDD3-207ENST00000496342 A0A0J9YWU9 116 aa12.87□□□□□ -0.35
RHBDD3-207ENST00000496342 IGSF23A1L1A6 192 aa12.87□□□□□ -0.35
RHBDD3-207ENST00000496342 UBE2CO00762 179 aa12.87□□□□□ -0.35
RHBDD3-207ENST00000496342 LINC00869P0C866 280 aa12.87□□□□□ -0.35
RHBDD3-207ENST00000496342 C4BPBP20851 252 aa12.87□□□□□ -0.35
RHBDD3-207ENST00000496342 AP2S1P53680 142 aaPredicted RBP12.87□□□□□ -0.35
RHBDD3-207ENST00000496342 TRPT1Q86TN4 253 aaKnown RBP12.87□□□□□ -0.35
RHBDD3-207ENST00000496342 OR8I2Q8N0Y5 310 aa12.87□□□□□ -0.35
RHBDD3-207ENST00000496342 TMEM217Q8N7C4 229 aa12.87□□□□□ -0.35
RHBDD3-207ENST00000496342 ZNF98A6NK75 572 aa12.86□□□□□ -0.35
RHBDD3-207ENST00000496342 SOCS3O14543 225 aa12.86□□□□□ -0.35
RHBDD3-207ENST00000496342 NUP62P37198 522 aaPredicted RBP12.86□□□□□ -0.35
RHBDD3-207ENST00000496342 DEFA1P59665 94 aa12.86□□□□□ -0.35
RHBDD3-207ENST00000496342 DEFA3P59666 94 aa12.86□□□□□ -0.35
RHBDD3-207ENST00000496342 C17orf77Q96MU5 243 aa12.86□□□□□ -0.35
RHBDD3-207ENST00000496342 UHRF2Q96PU4 802 aa12.86□□□□□ -0.35
RHBDD3-207ENST00000496342 MARVELD1Q9BSK0 173 aa12.86□□□□□ -0.35
RHBDD3-207ENST00000496342 TMEM147Q9BVK8 224 aa12.86□□□□□ -0.35
RHBDD3-207ENST00000496342 NPVFQ9HCQ7 196 aa12.86□□□□□ -0.35
RHBDD3-207ENST00000496342 TP53TG1Q9Y2A0 90 aa12.86□□□□□ -0.35
RHBDD3-207ENST00000496342 H3BRN7 92 aa12.85□□□□□ -0.35
RHBDD3-207ENST00000496342 PRAF2O60831 178 aa12.85□□□□□ -0.35
RHBDD3-207ENST00000496342 GIG44P09565 113 aaPredicted RBP12.85□□□□□ -0.35
RHBDD3-207ENST00000496342 LRRC37A5PQ49AS3 106 aa12.85□□□□□ -0.35
RHBDD3-207ENST00000496342 GDF5OSQ5U4N7 250 aa12.85□□□□□ -0.35
RHBDD3-207ENST00000496342 MGST2Q99735 147 aa12.85□□□□□ -0.35
RHBDD3-207ENST00000496342 STARD9Q9P2P6 4700 aa12.84□□□□□ -0.35
RHBDD3-207ENST00000496342 FNDC10F2Z333 226 aa12.84□□□□□ -0.35
RHBDD3-207ENST00000496342 CFDP00746 253 aaPredicted RBP12.84□□□□□ -0.35
RHBDD3-207ENST00000496342 OR5G3P0C626 314 aa12.84□□□□□ -0.35
RHBDD3-207ENST00000496342 C1orf194Q5T5A4 169 aa12.84□□□□□ -0.35
RHBDD3-207ENST00000496342 TEPPQ6URK8 271 aa12.84□□□□□ -0.35
RHBDD3-207ENST00000496342 PATE2Q6UY27 113 aa12.84□□□□□ -0.35
RHBDD3-207ENST00000496342 TMEM252Q8N6L7 170 aa12.84□□□□□ -0.35
RHBDD3-207ENST00000496342 C20orf173Q96LM9 149 aa12.84□□□□□ -0.35
RHBDD3-207ENST00000496342 LINC00052Q96N35 136 aa12.84□□□□□ -0.35
RHBDD3-207ENST00000496342 SLC25A39Q9BZJ4 359 aaPredicted RBP12.84□□□□□ -0.35
RHBDD3-207ENST00000496342 ARL6Q9H0F7 186 aa12.84□□□□□ -0.35
RHBDD3-207ENST00000496342 LYRM2Q9NU23 88 aaPredicted RBP12.84□□□□□ -0.35
RHBDD3-207ENST00000496342 OR5AC2Q9NZP5 309 aa12.84□□□□□ -0.35
RHBDD3-207ENST00000496342 FBXL17Q9UF56 701 aa12.84□□□□□ -0.35
RHBDD3-207ENST00000496342 PFDN2Q9UHV9 154 aa12.84□□□□□ -0.35
RHBDD3-207ENST00000496342 KMT2CQ8NEZ4 4911 aaKnown RBP12.83□□□□□ -0.36
RHBDD3-207ENST00000496342 UBE2L5PA0A1B0GUS4 154 aa12.83□□□□□ -0.36
RHBDD3-207ENST00000496342 AGPAT2O15120 278 aa12.83□□□□□ -0.36
RHBDD3-207ENST00000496342 DEDDO75618 318 aa12.83□□□□□ -0.36
RHBDD3-207ENST00000496342 PVALBP20472 110 aaPredicted RBP12.83□□□□□ -0.36
RHBDD3-207ENST00000496342 SNRPD3P62318 126 aaKnown RBP12.83□□□□□ -0.36
RHBDD3-207ENST00000496342 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.83□□□□□ -0.36
RHBDD3-207ENST00000496342 CLEC5AQ9NY25 188 aa12.83□□□□□ -0.36
RHBDD3-207ENST00000496342 SLC45A2Q9UMX9 530 aa12.83□□□□□ -0.36
RHBDD3-207ENST00000496342 HIGD1AQ9Y241 93 aa12.83□□□□□ -0.36
RHBDD3-207ENST00000496342 CSMD3Q7Z407 3707 aa12.83□□□□□ -0.36
RHBDD3-207ENST00000496342 H0YIZ8 118 aa12.82□□□□□ -0.36
RHBDD3-207ENST00000496342 HYPMO75409 117 aa12.82□□□□□ -0.36
RHBDD3-207ENST00000496342 H2BFSP57053 126 aa12.82□□□□□ -0.36
RHBDD3-207ENST00000496342 IGFL4Q6B9Z1 124 aa12.82□□□□□ -0.36
RHBDD3-207ENST00000496342 SHANK2-AS3Q9BTD1 123 aa12.82□□□□□ -0.36
RHBDD3-207ENST00000496342 RSG1Q9BU20 258 aa12.82□□□□□ -0.36
RHBDD3-207ENST00000496342 F6UB75 175 aa12.81□□□□□ -0.36
RHBDD3-207ENST00000496342 DEFB4AO15263 64 aa12.81□□□□□ -0.36
RHBDD3-207ENST00000496342 SSNA1O43805 119 aa12.81□□□□□ -0.36
RHBDD3-207ENST00000496342 IGKV3-20P01619 116 aa12.81□□□□□ -0.36
RHBDD3-207ENST00000496342 PRB4P10163 310 aaPredicted RBP12.81□□□□□ -0.36
RHBDD3-207ENST00000496342 GALR1P47211 349 aa12.81□□□□□ -0.36
RHBDD3-207ENST00000496342 SULT1A1P50225 295 aa12.81□□□□□ -0.36
RHBDD3-207ENST00000496342 PLP1P60201 277 aa12.81□□□□□ -0.36
RHBDD3-207ENST00000496342 RAP2BP61225 183 aa12.81□□□□□ -0.36
RHBDD3-207ENST00000496342 SELENOTP62341 195 aa12.81□□□□□ -0.36
RHBDD3-207ENST00000496342 MIC13Q5XKP0 118 aa12.81□□□□□ -0.36
RHBDD3-207ENST00000496342 OR11H2Q8NH07 326 aa12.81□□□□□ -0.36
RHBDD3-207ENST00000496342 RARRES2Q99969 163 aa12.81□□□□□ -0.36
RHBDD3-207ENST00000496342 GGACTQ9BVM4 153 aa12.81□□□□□ -0.36
RHBDD3-207ENST00000496342 H3BMM0 161 aa12.8□□□□□ -0.36
RHBDD3-207ENST00000496342 SNRPCP09234 159 aaKnown RBP12.8□□□□□ -0.36
RHBDD3-207ENST00000496342 PSMB3P49720 205 aa12.8□□□□□ -0.36
RHBDD3-207ENST00000496342 FXYD7P58549 80 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms