RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 ELOA3CA0A087WX78 387 aaPredicted RBP16.6■□□□□ 0.25
ECHDC3-205ENST00000496136 NPPCP23582 126 aa16.6■□□□□ 0.25
ECHDC3-205ENST00000496136 UHRF2Q96PU4 802 aa16.6■□□□□ 0.25
ECHDC3-205ENST00000496136 RABAC1Q9UI14 185 aa16.6■□□□□ 0.25
ECHDC3-205ENST00000496136 TMEM213A2RRL7 107 aa16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 M0QZ24 198 aa16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 OVOL1O14753 267 aa16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 COX7A2P2O60397 106 aa16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 M6PRP20645 277 aa16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 CRYBB3P26998 211 aa16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 C10orf113Q5VZT2 155 aa16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 EIF5AL1Q6IS14 154 aaKnown RBP16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 LINC00482Q8N8I6 264 aa16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 OR1L4Q8NGR5 311 aa16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 GATAD1Q8WUU5 269 aa16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 METTL26Q96S19 204 aa16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 EDN2P20800 178 aa16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 ACOT6Q3I5F7 207 aaPredicted RBP16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 PFDN5Q99471 154 aa16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 RPRMQ9NS64 109 aa16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 PEMTQ9UBM1 199 aa16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 HIGD1AQ9Y241 93 aa16.59■□□□□ 0.25
ECHDC3-205ENST00000496136 APOHP02749 345 aaPredicted RBP16.58■□□□□ 0.24
ECHDC3-205ENST00000496136 RAB2AP61019 212 aa16.58■□□□□ 0.24
ECHDC3-205ENST00000496136 IL34Q6ZMJ4 242 aa16.58■□□□□ 0.24
ECHDC3-205ENST00000496136 LINC00305Q7Z4B0 112 aa16.58■□□□□ 0.24
ECHDC3-205ENST00000496136 PHYHIPLQ96FC7 376 aa16.58■□□□□ 0.24
ECHDC3-205ENST00000496136 SEPSECSQ9HD40 501 aaKnown RBP16.58■□□□□ 0.24
ECHDC3-205ENST00000496136 U3KQE9 123 aa16.58■□□□□ 0.24
ECHDC3-205ENST00000496136 TRRAPQ9Y4A5 3859 aa16.58■□□□□ 0.24
ECHDC3-205ENST00000496136 IGHV3-49A0A0A0MS15 119 aa16.57■□□□□ 0.24
ECHDC3-205ENST00000496136 C2orf70A6NJV1 201 aa16.57■□□□□ 0.24
ECHDC3-205ENST00000496136 MBP02144 154 aa16.57■□□□□ 0.24
ECHDC3-205ENST00000496136 AKR1C8PQ5T2L2 129 aa16.57■□□□□ 0.24
ECHDC3-205ENST00000496136 RPP25LQ8N5L8 163 aaKnown RBP16.57■□□□□ 0.24
ECHDC3-205ENST00000496136 OR10G4Q8NGN3 311 aa16.57■□□□□ 0.24
ECHDC3-205ENST00000496136 OR10G9Q8NGN4 311 aa16.57■□□□□ 0.24
ECHDC3-205ENST00000496136 OR10G7Q8NGN6 311 aa16.57■□□□□ 0.24
ECHDC3-205ENST00000496136 SLC25A39Q9BZJ4 359 aaPredicted RBP16.57■□□□□ 0.24
ECHDC3-205ENST00000496136 IGHV3OR16-13A0A075B7E8 117 aa16.56■□□□□ 0.24
ECHDC3-205ENST00000496136 IGHV3-74A0A0B4J1X5 117 aa16.56■□□□□ 0.24
ECHDC3-205ENST00000496136 CBLN1P23435 193 aa16.56■□□□□ 0.24
ECHDC3-205ENST00000496136 TMEM41BQ5BJD5 291 aa16.56■□□□□ 0.24
ECHDC3-205ENST00000496136 FAM78BQ5VT40 261 aa16.56■□□□□ 0.24
ECHDC3-205ENST00000496136 ALKAL2Q6UX46 152 aa16.56■□□□□ 0.24
ECHDC3-205ENST00000496136 SMPXQ9UHP9 88 aa16.56■□□□□ 0.24
ECHDC3-205ENST00000496136 IGHV7-4-1A0A0J9YVY3 117 aa16.56■□□□□ 0.24
ECHDC3-205ENST00000496136 MORN5Q5VZ52 161 aa16.56■□□□□ 0.24
ECHDC3-205ENST00000496136 ADAMTSL5Q6ZMM2 481 aa16.56■□□□□ 0.24
ECHDC3-205ENST00000496136 SPATA3Q8NHX4 192 aa16.56■□□□□ 0.24
ECHDC3-205ENST00000496136 UMAD1C9J7I0 102 aa16.55■□□□□ 0.24
ECHDC3-205ENST00000496136 BUB3O43684 328 aa16.55■□□□□ 0.24
ECHDC3-205ENST00000496136 CSN3P07498 182 aa16.55■□□□□ 0.24
ECHDC3-205ENST00000496136 C8orf88P0DMB2 117 aa16.55■□□□□ 0.24
ECHDC3-205ENST00000496136 FOLR2P14207 255 aa16.55■□□□□ 0.24
ECHDC3-205ENST00000496136 TEX261Q6UWH6 196 aa16.55■□□□□ 0.24
ECHDC3-205ENST00000496136 SHANK2-AS3Q9BTD1 123 aa16.55■□□□□ 0.24
ECHDC3-205ENST00000496136 NOTCH3Q9UM47 2321 aa16.54■□□□□ 0.24
ECHDC3-205ENST00000496136 IGHV3-66A0A0C4DH42 116 aa16.54■□□□□ 0.24
ECHDC3-205ENST00000496136 ZNF98A6NK75 572 aa16.54■□□□□ 0.24
ECHDC3-205ENST00000496136 LEMD1Q68G75 181 aa16.54■□□□□ 0.24
ECHDC3-205ENST00000496136 RHPN1-AS1Q9BWJ2 59 aa16.54■□□□□ 0.24
ECHDC3-205ENST00000496136 DNHD1Q96M86 4753 aa16.54■□□□□ 0.24
ECHDC3-205ENST00000496136 H3BRN7 92 aa16.54■□□□□ 0.24
ECHDC3-205ENST00000496136 CHEK1O14757 476 aa16.54■□□□□ 0.24
ECHDC3-205ENST00000496136 FHITP49789 147 aa16.54■□□□□ 0.24
ECHDC3-205ENST00000496136 SPATA31B1PQ5VZV4 182 aa16.54■□□□□ 0.24
ECHDC3-205ENST00000496136 S100A7AQ86SG5 101 aa16.54■□□□□ 0.24
ECHDC3-205ENST00000496136 MARC2Q969Z3 335 aa16.54■□□□□ 0.24
ECHDC3-205ENST00000496136 SCRT1Q9BWW7 348 aa16.54■□□□□ 0.24
ECHDC3-205ENST00000496136 PFDN2Q9UHV9 154 aa16.54■□□□□ 0.24
ECHDC3-205ENST00000496136 A0A1W2PPV4 95 aa16.53■□□□□ 0.24
ECHDC3-205ENST00000496136 RHOBP62745 196 aa16.53■□□□□ 0.24
ECHDC3-205ENST00000496136 FAM74A1Q5RGS3 127 aa16.53■□□□□ 0.24
ECHDC3-205ENST00000496136 FAM122CQ6P4D5 195 aa16.53■□□□□ 0.24
ECHDC3-205ENST00000496136 MIR17HGQ75NE6 70 aa16.53■□□□□ 0.24
ECHDC3-205ENST00000496136 WFDC9Q8NEX5 89 aa16.53■□□□□ 0.24
ECHDC3-205ENST00000496136 NARS2Q96I59 477 aaKnown RBP16.53■□□□□ 0.24
ECHDC3-205ENST00000496136 RNF2Q99496 336 aa16.53■□□□□ 0.24
ECHDC3-205ENST00000496136 ELOVL1Q9BW60 279 aa16.53■□□□□ 0.24
ECHDC3-205ENST00000496136 FUT9Q9Y231 359 aa16.53■□□□□ 0.24
ECHDC3-205ENST00000496136 TRAV5A0A0B4J249 113 aa16.52■□□□□ 0.24
ECHDC3-205ENST00000496136 A0A1W2PS18 150 aa16.52■□□□□ 0.24
ECHDC3-205ENST00000496136 S100A7P31151 101 aa16.52■□□□□ 0.24
ECHDC3-205ENST00000496136 SULT1A2P50226 295 aa16.52■□□□□ 0.24
ECHDC3-205ENST00000496136 ZNF680Q8NEM1 530 aa16.52■□□□□ 0.24
ECHDC3-205ENST00000496136 SLC25A22Q9H936 323 aa16.52■□□□□ 0.24
ECHDC3-205ENST00000496136 SEC14L6B5MCN3 397 aa16.51■□□□□ 0.23
ECHDC3-205ENST00000496136 EIF3GO75821 320 aaKnown RBP eCLIP16.51■□□□□ 0.23
ECHDC3-205ENST00000496136 MRPL32Q9BYC8 188 aaKnown RBP16.51■□□□□ 0.23
ECHDC3-205ENST00000496136 SIGLEC8Q9NYZ4 499 aa16.51■□□□□ 0.23
ECHDC3-205ENST00000496136 RAB5CP51148 216 aa16.51■□□□□ 0.23
ECHDC3-205ENST00000496136 ZNF726P1Q15940 193 aa16.51■□□□□ 0.23
ECHDC3-205ENST00000496136 C1orf194Q5T5A4 169 aa16.51■□□□□ 0.23
ECHDC3-205ENST00000496136 RAB24Q969Q5 203 aa16.51■□□□□ 0.23
ECHDC3-205ENST00000496136 ACTR3CQ9C0K3 210 aaPredicted RBP16.51■□□□□ 0.23
ECHDC3-205ENST00000496136 CDC34P49427 236 aaPredicted RBP16.5■□□□□ 0.23
ECHDC3-205ENST00000496136 C16orf54Q6UWD8 224 aa16.5■□□□□ 0.23
ECHDC3-205ENST00000496136 OR8I2Q8N0Y5 310 aa16.5■□□□□ 0.23
ECHDC3-205ENST00000496136 MLXQ9UH92 298 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms