RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 PRB2P02812 416 aaPredicted RBP11.12□□□□□ -0.63
HDAC9-226ENST00000496026 CD5P06127 495 aa11.12□□□□□ -0.63
HDAC9-226ENST00000496026 GP9P14770 177 aa11.12□□□□□ -0.63
HDAC9-226ENST00000496026 RPL11P62913 178 aaKnown RBP11.12□□□□□ -0.63
HDAC9-226ENST00000496026 OPCMLQ14982 345 aa11.12□□□□□ -0.63
HDAC9-226ENST00000496026 Q6ZRG5 221 aa11.12□□□□□ -0.63
HDAC9-226ENST00000496026 TCF24Q7RTU0 167 aa11.12□□□□□ -0.63
HDAC9-226ENST00000496026 S100A7AQ86SG5 101 aa11.12□□□□□ -0.63
HDAC9-226ENST00000496026 AKAP14Q86UN6 197 aa11.12□□□□□ -0.63
HDAC9-226ENST00000496026 PRR25Q96S07 402 aa11.12□□□□□ -0.63
HDAC9-226ENST00000496026 NPCDR1Q9BY65 106 aa11.12□□□□□ -0.63
HDAC9-226ENST00000496026 MFFQ9GZY8 342 aa11.12□□□□□ -0.63
HDAC9-226ENST00000496026 WFDC1Q9HC57 220 aa11.12□□□□□ -0.63
HDAC9-226ENST00000496026 HIGD1AQ9Y241 93 aa11.12□□□□□ -0.63
HDAC9-226ENST00000496026 IGKV3-7A0A075B6H7 116 aa11.11□□□□□ -0.63
HDAC9-226ENST00000496026 C17orf112F2Z3M2 114 aa11.11□□□□□ -0.63
HDAC9-226ENST00000496026 COX7A2P2O60397 106 aa11.11□□□□□ -0.63
HDAC9-226ENST00000496026 RPL29P47914 159 aaKnown RBP11.11□□□□□ -0.63
HDAC9-226ENST00000496026 PLP1P60201 277 aa11.11□□□□□ -0.63
HDAC9-226ENST00000496026 B2MP61769 119 aa11.11□□□□□ -0.63
HDAC9-226ENST00000496026 ZNF266Q14584 549 aa11.11□□□□□ -0.63
HDAC9-226ENST00000496026 PXDC1Q5TGL8 231 aa11.11□□□□□ -0.63
HDAC9-226ENST00000496026 TCTE3Q8IZS6 198 aa11.11□□□□□ -0.63
HDAC9-226ENST00000496026 STPG3Q8N7X2 389 aa11.11□□□□□ -0.63
HDAC9-226ENST00000496026 KCNIP2Q9NS61 270 aa11.11□□□□□ -0.63
HDAC9-226ENST00000496026 PXMP4Q9Y6I8 212 aa11.11□□□□□ -0.63
HDAC9-226ENST00000496026 TSPAN4O14817 238 aa11.1□□□□□ -0.63
HDAC9-226ENST00000496026 BUB3O43684 328 aa11.1□□□□□ -0.63
HDAC9-226ENST00000496026 PAFAH1B2P68402 229 aa11.1□□□□□ -0.63
HDAC9-226ENST00000496026 PRR20EP86478 221 aa11.1□□□□□ -0.63
HDAC9-226ENST00000496026 PRR20CP86479 221 aa11.1□□□□□ -0.63
HDAC9-226ENST00000496026 PRR20DP86480 221 aa11.1□□□□□ -0.63
HDAC9-226ENST00000496026 PRR20BP86481 221 aa11.1□□□□□ -0.63
HDAC9-226ENST00000496026 PRR20AP86496 221 aa11.1□□□□□ -0.63
HDAC9-226ENST00000496026 C16orf54Q6UWD8 224 aa11.1□□□□□ -0.63
HDAC9-226ENST00000496026 OR11H4Q8NGC9 324 aa11.1□□□□□ -0.63
HDAC9-226ENST00000496026 SPAG8Q99932 426 aaPredicted RBP11.1□□□□□ -0.63
HDAC9-226ENST00000496026 NEURL2Q9BR09 285 aa11.1□□□□□ -0.63
HDAC9-226ENST00000496026 PARD6GQ9BYG4 376 aaPredicted RBP11.1□□□□□ -0.63
HDAC9-226ENST00000496026 SLC39A9Q9NUM3 307 aa11.1□□□□□ -0.63
HDAC9-226ENST00000496026 AURKAIP1Q9NWT8 199 aaPredicted RBP11.1□□□□□ -0.63
HDAC9-226ENST00000496026 MGAM2Q2M2H8 2515 aa11.09□□□□□ -0.63
HDAC9-226ENST00000496026 ELOA3CA0A087WX78 387 aaPredicted RBP11.09□□□□□ -0.63
HDAC9-226ENST00000496026 HELTA6NFD8 242 aa11.09□□□□□ -0.63
HDAC9-226ENST00000496026 ZNF785A8K8V0 405 aa11.09□□□□□ -0.63
HDAC9-226ENST00000496026 HMSDA8MTL9 139 aa11.09□□□□□ -0.63
HDAC9-226ENST00000496026 TFPI2P48307 235 aa11.09□□□□□ -0.63
HDAC9-226ENST00000496026 DEFA6Q01524 100 aa11.09□□□□□ -0.63
HDAC9-226ENST00000496026 C1orf194Q5T5A4 169 aa11.09□□□□□ -0.63
HDAC9-226ENST00000496026 C10orf113Q5VZT2 155 aa11.09□□□□□ -0.63
HDAC9-226ENST00000496026 FAM90A2PQ658T7 463 aa11.09□□□□□ -0.63
HDAC9-226ENST00000496026 GTSCR1Q86UQ5 136 aa11.09□□□□□ -0.63
HDAC9-226ENST00000496026 GBGT1Q8N5D6 347 aa11.09□□□□□ -0.63
HDAC9-226ENST00000496026 OR1L4Q8NGR5 311 aa11.09□□□□□ -0.63
HDAC9-226ENST00000496026 GLMPQ8WWB7 406 aa11.09□□□□□ -0.63
HDAC9-226ENST00000496026 RSG1Q9BU20 258 aa11.09□□□□□ -0.63
HDAC9-226ENST00000496026 SLC25A39Q9BZJ4 359 aaPredicted RBP11.09□□□□□ -0.63
HDAC9-226ENST00000496026 ARV1Q9H2C2 271 aa11.09□□□□□ -0.63
HDAC9-226ENST00000496026 SLC25A22Q9H936 323 aa11.09□□□□□ -0.63
HDAC9-226ENST00000496026 BORCS7-ASMTA0A0B4J1R7 106 aa11.08□□□□□ -0.64
HDAC9-226ENST00000496026 ZNF98A6NK75 572 aa11.08□□□□□ -0.64
HDAC9-226ENST00000496026 DNASE2O00115 360 aaPredicted RBP11.08□□□□□ -0.64
HDAC9-226ENST00000496026 PATE2Q6UY27 113 aa11.08□□□□□ -0.64
HDAC9-226ENST00000496026 SIGLEC15Q6ZMC9 328 aa11.08□□□□□ -0.64
HDAC9-226ENST00000496026 WFDC3Q8IUB2 231 aa11.08□□□□□ -0.64
HDAC9-226ENST00000496026 OR8I2Q8N0Y5 310 aa11.08□□□□□ -0.64
HDAC9-226ENST00000496026 STXBP6Q8NFX7 210 aa11.08□□□□□ -0.64
HDAC9-226ENST00000496026 UHRF2Q96PU4 802 aa11.08□□□□□ -0.64
HDAC9-226ENST00000496026 PFDN5Q99471 154 aa11.08□□□□□ -0.64
HDAC9-226ENST00000496026 SHANK2-AS3Q9BTD1 123 aa11.08□□□□□ -0.64
HDAC9-226ENST00000496026 DNAJC4Q9NNZ3 241 aa11.08□□□□□ -0.64
HDAC9-226ENST00000496026 RNF24Q9Y225 148 aa11.08□□□□□ -0.64
HDAC9-226ENST00000496026 NOTCH3Q9UM47 2321 aa11.07□□□□□ -0.64
HDAC9-226ENST00000496026 A0A0D9SG52 128 aa11.07□□□□□ -0.64
HDAC9-226ENST00000496026 OR4C46A6NHA9 309 aa11.07□□□□□ -0.64
HDAC9-226ENST00000496026 H3BRN7 92 aa11.07□□□□□ -0.64
HDAC9-226ENST00000496026 TAAR5O14804 337 aa11.07□□□□□ -0.64
HDAC9-226ENST00000496026 CD81P60033 236 aa11.07□□□□□ -0.64
HDAC9-226ENST00000496026 ZNF345Q14585 488 aa11.07□□□□□ -0.64
HDAC9-226ENST00000496026 LEMD1Q68G75 181 aa11.07□□□□□ -0.64
HDAC9-226ENST00000496026 LINC00305Q7Z4B0 112 aa11.07□□□□□ -0.64
HDAC9-226ENST00000496026 SCRT1Q9BWW7 348 aa11.07□□□□□ -0.64
HDAC9-226ENST00000496026 MS4A6AQ9H2W1 248 aa11.07□□□□□ -0.64
HDAC9-226ENST00000496026 C1QBP02746 253 aa11.06□□□□□ -0.64
HDAC9-226ENST00000496026 GALR1P47211 349 aa11.06□□□□□ -0.64
HDAC9-226ENST00000496026 FFAR4Q5NUL3 377 aa11.06□□□□□ -0.64
HDAC9-226ENST00000496026 RPL7L1Q6DKI1 246 aaKnown RBP11.06□□□□□ -0.64
HDAC9-226ENST00000496026 KCNRGQ8N5I3 272 aa11.06□□□□□ -0.64
HDAC9-226ENST00000496026 HSD17B11Q8NBQ5 300 aa11.06□□□□□ -0.64
HDAC9-226ENST00000496026 TMEM37Q8WXS4 190 aa11.06□□□□□ -0.64
HDAC9-226ENST00000496026 GPR82Q96P67 336 aa11.06□□□□□ -0.64
HDAC9-226ENST00000496026 ARPC5LQ9BPX5 153 aa11.06□□□□□ -0.64
HDAC9-226ENST00000496026 CD7P09564 240 aa11.05□□□□□ -0.64
HDAC9-226ENST00000496026 CXCL2P19875 107 aa11.05□□□□□ -0.64
HDAC9-226ENST00000496026 GCSAMLQ5JQS6 135 aa11.05□□□□□ -0.64
HDAC9-226ENST00000496026 GATAD1Q8WUU5 269 aa11.05□□□□□ -0.64
HDAC9-226ENST00000496026 SLC25A32Q9H2D1 315 aa11.05□□□□□ -0.64
HDAC9-226ENST00000496026 TRAV2A0A0B4J234 112 aa11.04□□□□□ -0.64
HDAC9-226ENST00000496026 KANTRA0A1W2PQU2 76 aa11.04□□□□□ -0.64
HDAC9-226ENST00000496026 K7EIL1 84 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms