RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 TTC9CQ8N5M4 171 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 PACRGLQ8N7B6 248 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 TMEM167AQ8TBQ9 72 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 CYGBQ8WWM9 190 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 ACOT12Q8WYK0 555 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 PHB2Q99623 299 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 CMSS1Q9BQ75 279 aaKnown RBP3.05□□□□□ -1.92
VPS52-222ENST00000495981 PLGRKTQ9HBL7 147 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 S4R3C0 116 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 A0A087WYN8 130 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 LOC102724200A0A096LPH7 203 aaPredicted RBP3.04□□□□□ -1.92
VPS52-222ENST00000495981 A0A1B0GWB2 263 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 IFITM10A6NMD0 228 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 CREBL2O60519 120 aaPredicted RBP3.04□□□□□ -1.92
VPS52-222ENST00000495981 GGCTO75223 188 aaKnown RBP3.04□□□□□ -1.92
VPS52-222ENST00000495981 DHFRP00374 187 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 RBMY1A1P0DJD3 496 aaKnown RBP3.04□□□□□ -1.92
VPS52-222ENST00000495981 C8orf88P0DMB2 117 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 EIF2B2P49770 351 aaKnown RBP3.04□□□□□ -1.92
VPS52-222ENST00000495981 SPCS3P61009 180 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 FABP5Q01469 135 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 ATP5G2Q06055 141 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 ARFRP1Q13795 201 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 SSX1Q16384 188 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 TIMM50Q3ZCQ8 353 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 ZNF506Q5JVG8 444 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 HES5Q5TA89 166 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 OGFRL1Q5TC84 451 aaPredicted RBP3.04□□□□□ -1.92
VPS52-222ENST00000495981 SLC16A13Q7RTY0 426 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 GPHB5Q86YW7 130 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 C8orf59Q8N0T1 100 aaPredicted RBP3.04□□□□□ -1.92
VPS52-222ENST00000495981 VKORC1L1Q8N0U8 176 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 MS4A15Q8N5U1 240 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 ZNF645Q8N7E2 425 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 OR10J5Q8NHC4 309 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 ZNF502Q8TBZ5 544 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 TMEM203Q969S6 136 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 FAM3DQ96BQ1 224 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 ADTRPQ96IZ2 230 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 SPIN2AQ99865 258 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 SPIN2BQ9BPZ2 258 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 C20orf24Q9BUV8 137 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 ZNF436Q9C0F3 470 aaPredicted RBP3.04□□□□□ -1.92
VPS52-222ENST00000495981 C11orf68Q9H3H3 251 aaKnown RBP3.04□□□□□ -1.92
VPS52-222ENST00000495981 JPT2Q9H910 190 aa3.04□□□□□ -1.92
VPS52-222ENST00000495981 RBMX2Q9Y388 322 aaKnown RBP3.04□□□□□ -1.92
VPS52-222ENST00000495981 IGLV7-46A0A075B6I9 117 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 KIR2DL5BA0A0G2JN68 375 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 KIR2DL5BA0A0G2JPC4 375 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 IFITM5A6NNB3 132 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 F8W036 122 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 DENRO43583 198 aaKnown RBP3.03□□□□□ -1.92
VPS52-222ENST00000495981 REG1AP05451 166 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 CD36P16671 472 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 HLA-GP17693 338 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 DTYMKP23919 212 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 PSMB6P28072 239 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 RPL27AP46776 148 aaKnown RBP3.03□□□□□ -1.92
VPS52-222ENST00000495981 OR2B8PP59922 312 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 MLLT11Q13015 90 aaPredicted RBP3.03□□□□□ -1.92
VPS52-222ENST00000495981 TPBGQ13641 420 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 POU2AF1Q16633 256 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 LEMD1Q68G75 181 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 CLEC19AQ6UXS0 136 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 SLC25A42Q86VD7 318 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 KIR2DL5AQ8N109 375 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.03□□□□□ -1.92
VPS52-222ENST00000495981 BPIFB6Q8NFQ5 453 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 BEST4Q8NFU0 473 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 OR13F1Q8NGS4 319 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 OR10R2Q8NGX6 335 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 OR4S2Q8NH73 311 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 KIR2DL5BQ8NHK3 375 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 GLYATL2Q8WU03 294 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 UFD1Q92890 307 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 CHCHD5Q9BSY4 110 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 RNF126Q9BV68 326 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 SLC2A9Q9NRM0 540 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 NDUFB11Q9NX14 153 aa3.03□□□□□ -1.92
VPS52-222ENST00000495981 IGHV3-35A0A0C4DH35 117 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 LOC100506127A0A0U1RQW1 187 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 TMEM235A6NFC5 223 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 E9PLD3 99 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 TGOLN2O43493 480 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 ARL6IP5O75915 188 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 HLA-DQB1P01920 261 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 NFYAP23511 347 aaPredicted RBP3.02□□□□□ -1.93
VPS52-222ENST00000495981 PSMA1P25786 263 aaKnown RBP3.02□□□□□ -1.93
VPS52-222ENST00000495981 HNRNPA3P51991 378 aaKnown RBP3.02□□□□□ -1.93
VPS52-222ENST00000495981 APOC4P55056 127 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 IFITM2Q01629 132 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 WT1-ASQ06250 92 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 MSMO1Q15800 293 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 ZNF773Q6PK81 442 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 LINC00336Q6ZUF6 198 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 GDPD1Q8N9F7 314 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 Q8NAQ8 132 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 CSNK1G2-AS1Q8NCQ2 148 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 VSTM2AQ8TAG5 236 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 MARCH1Q8TCQ1 289 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms