RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 SLC45A2Q9UMX9 530 aa12.1□□□□□ -0.47
YIF1A-209ENST00000494836 MPC2O95563 127 aa12.09□□□□□ -0.47
YIF1A-209ENST00000494836 LINC00869P0C866 280 aa12.09□□□□□ -0.47
YIF1A-209ENST00000494836 ORM2P19652 201 aa12.09□□□□□ -0.47
YIF1A-209ENST00000494836 CXCL3P19876 107 aa12.09□□□□□ -0.47
YIF1A-209ENST00000494836 CMC4P56277 68 aaPredicted RBP12.09□□□□□ -0.47
YIF1A-209ENST00000494836 SIGLEC15Q6ZMC9 328 aa12.09□□□□□ -0.47
YIF1A-209ENST00000494836 ZNF546Q86UE3 836 aa12.09□□□□□ -0.47
YIF1A-209ENST00000494836 OR1B1Q8NGR6 318 aa12.09□□□□□ -0.47
YIF1A-209ENST00000494836 TMEM147Q9BVK8 224 aa12.09□□□□□ -0.47
YIF1A-209ENST00000494836 S100A7P31151 101 aa12.08□□□□□ -0.48
YIF1A-209ENST00000494836 EWSR1Q01844 656 aaKnown RBP eCLIP12.08□□□□□ -0.48
YIF1A-209ENST00000494836 RAB31Q13636 194 aa12.08□□□□□ -0.48
YIF1A-209ENST00000494836 FCN2Q15485 313 aa12.08□□□□□ -0.48
YIF1A-209ENST00000494836 VWC2Q2TAL6 325 aa12.08□□□□□ -0.48
YIF1A-209ENST00000494836 C1orf194Q5T5A4 169 aa12.08□□□□□ -0.48
YIF1A-209ENST00000494836 STPG3Q8N7X2 389 aa12.08□□□□□ -0.48
YIF1A-209ENST00000494836 MAP6D1Q9H9H5 199 aa12.08□□□□□ -0.48
YIF1A-209ENST00000494836 FBXL17Q9UF56 701 aa12.08□□□□□ -0.48
YIF1A-209ENST00000494836 HUWE1Q7Z6Z7 4374 aaKnown RBP12.07□□□□□ -0.48
YIF1A-209ENST00000494836 UBE2L5PA0A1B0GUS4 154 aa12.07□□□□□ -0.48
YIF1A-209ENST00000494836 RBMY1BA6NDE4 496 aaKnown RBP12.07□□□□□ -0.48
YIF1A-209ENST00000494836 RBMY1EA6NEQ0 496 aaKnown RBP12.07□□□□□ -0.48
YIF1A-209ENST00000494836 K7EQG2 157 aa12.07□□□□□ -0.48
YIF1A-209ENST00000494836 AGPAT2O15120 278 aa12.07□□□□□ -0.48
YIF1A-209ENST00000494836 RBMY1DP0C7P1 496 aaKnown RBP12.07□□□□□ -0.48
YIF1A-209ENST00000494836 BAXQ07812 192 aa12.07□□□□□ -0.48
YIF1A-209ENST00000494836 HAGHQ16775 308 aa12.07□□□□□ -0.48
YIF1A-209ENST00000494836 ATP6V1FQ16864 119 aa12.07□□□□□ -0.48
YIF1A-209ENST00000494836 LINC00322Q6ZN03 302 aaPredicted RBP12.07□□□□□ -0.48
YIF1A-209ENST00000494836 OR11H7Q8NGC8 314 aa12.07□□□□□ -0.48
YIF1A-209ENST00000494836 DCANP1Q8TF63 244 aa12.07□□□□□ -0.48
YIF1A-209ENST00000494836 MGST2Q99735 147 aa12.07□□□□□ -0.48
YIF1A-209ENST00000494836 NRN1Q9NPD7 142 aa12.07□□□□□ -0.48
YIF1A-209ENST00000494836 DOK5Q9P104 306 aa12.07□□□□□ -0.48
YIF1A-209ENST00000494836 WDR83OSQ9Y284 106 aa12.07□□□□□ -0.48
YIF1A-209ENST00000494836 HYPMO75409 117 aa12.06□□□□□ -0.48
YIF1A-209ENST00000494836 CAMLGP49069 296 aa12.06□□□□□ -0.48
YIF1A-209ENST00000494836 PLP1P60201 277 aa12.06□□□□□ -0.48
YIF1A-209ENST00000494836 RAP2BP61225 183 aa12.06□□□□□ -0.48
YIF1A-209ENST00000494836 NHLH2Q02577 135 aa12.06□□□□□ -0.48
YIF1A-209ENST00000494836 APRG1Q8IVJ8 170 aa12.06□□□□□ -0.48
YIF1A-209ENST00000494836 OR8I2Q8N0Y5 310 aa12.06□□□□□ -0.48
YIF1A-209ENST00000494836 FAM24BQ8N5W8 94 aa12.06□□□□□ -0.48
YIF1A-209ENST00000494836 OR5C1Q8NGR4 320 aa12.06□□□□□ -0.48
YIF1A-209ENST00000494836 CITED4Q96RK1 184 aa12.06□□□□□ -0.48
YIF1A-209ENST00000494836 RNF126Q9BV68 326 aa12.06□□□□□ -0.48
YIF1A-209ENST00000494836 ZMAT4Q9H898 229 aa12.06□□□□□ -0.48
YIF1A-209ENST00000494836 SLC25A22Q9H936 323 aa12.06□□□□□ -0.48
YIF1A-209ENST00000494836 MBD2Q9UBB5 411 aa12.06□□□□□ -0.48
YIF1A-209ENST00000494836 HIGD1AQ9Y241 93 aa12.06□□□□□ -0.48
YIF1A-209ENST00000494836 LOC102724200A0A096LPH7 203 aaPredicted RBP12.05□□□□□ -0.48
YIF1A-209ENST00000494836 ZNF98A6NK75 572 aa12.05□□□□□ -0.48
YIF1A-209ENST00000494836 OR5G3P0C626 314 aa12.05□□□□□ -0.48
YIF1A-209ENST00000494836 PXDC1Q5TGL8 231 aa12.05□□□□□ -0.48
YIF1A-209ENST00000494836 S100A7AQ86SG5 101 aa12.05□□□□□ -0.48
YIF1A-209ENST00000494836 TM2D3Q9BRN9 247 aa12.05□□□□□ -0.48
YIF1A-209ENST00000494836 GGTLC1Q9BX51 225 aa12.05□□□□□ -0.48
YIF1A-209ENST00000494836 ARL6Q9H0F7 186 aa12.05□□□□□ -0.48
YIF1A-209ENST00000494836 STAB2Q8WWQ8 2551 aa12.04□□□□□ -0.48
YIF1A-209ENST00000494836 ZNF688P0C7X2 276 aa12.04□□□□□ -0.48
YIF1A-209ENST00000494836 FGF7P21781 194 aa12.04□□□□□ -0.48
YIF1A-209ENST00000494836 DEFB131AP59861 70 aa12.04□□□□□ -0.48
YIF1A-209ENST00000494836 THAP6Q8TBB0 222 aa12.04□□□□□ -0.48
YIF1A-209ENST00000494836 SPATA25Q9BR10 227 aa12.04□□□□□ -0.48
YIF1A-209ENST00000494836 SCRT1Q9BWW7 348 aa12.04□□□□□ -0.48
YIF1A-209ENST00000494836 SLC25A39Q9BZJ4 359 aaPredicted RBP12.04□□□□□ -0.48
YIF1A-209ENST00000494836 U3KQK5 164 aa12.04□□□□□ -0.48
YIF1A-209ENST00000494836 H3BRN7 92 aa12.03□□□□□ -0.48
YIF1A-209ENST00000494836 MPDU1O75352 247 aa12.03□□□□□ -0.48
YIF1A-209ENST00000494836 RPL12P30050 165 aaKnown RBP12.03□□□□□ -0.48
YIF1A-209ENST00000494836 GALR1P47211 349 aa12.03□□□□□ -0.48
YIF1A-209ENST00000494836 CLINT1Q14677 625 aa12.03□□□□□ -0.48
YIF1A-209ENST00000494836 ZNF124Q15973 351 aa12.03□□□□□ -0.48
YIF1A-209ENST00000494836 LEMD1Q68G75 181 aa12.03□□□□□ -0.48
YIF1A-209ENST00000494836 ASB13Q8WXK3 278 aa12.03□□□□□ -0.48
YIF1A-209ENST00000494836 GPR82Q96P67 336 aa12.03□□□□□ -0.48
YIF1A-209ENST00000494836 UHRF2Q96PU4 802 aa12.03□□□□□ -0.48
YIF1A-209ENST00000494836 SHANK2-AS3Q9BTD1 123 aa12.03□□□□□ -0.48
YIF1A-209ENST00000494836 ARV1Q9H2C2 271 aa12.03□□□□□ -0.48
YIF1A-209ENST00000494836 SLC25A32Q9H2D1 315 aa12.03□□□□□ -0.48
YIF1A-209ENST00000494836 TENM3Q9P273 2699 aa12.02□□□□□ -0.49
YIF1A-209ENST00000494836 COX7A2P2O60397 106 aa12.02□□□□□ -0.49
YIF1A-209ENST00000494836 GIPP09681 153 aaPredicted RBP12.02□□□□□ -0.49
YIF1A-209ENST00000494836 LYL1P12980 280 aa12.02□□□□□ -0.49
YIF1A-209ENST00000494836 APOC4P55056 127 aa12.02□□□□□ -0.49
YIF1A-209ENST00000494836 SNRPD3P62318 126 aaKnown RBP12.02□□□□□ -0.49
YIF1A-209ENST00000494836 MIC13Q5XKP0 118 aa12.02□□□□□ -0.49
YIF1A-209ENST00000494836 Q6ZRG5 221 aa12.02□□□□□ -0.49
YIF1A-209ENST00000494836 RCHY1Q96PM5 261 aa12.02□□□□□ -0.49
YIF1A-209ENST00000494836 SEPSECSQ9HD40 501 aaKnown RBP12.02□□□□□ -0.49
YIF1A-209ENST00000494836 RNF24Q9Y225 148 aa12.02□□□□□ -0.49
YIF1A-209ENST00000494836 HSPB11Q9Y547 144 aa12.02□□□□□ -0.49
YIF1A-209ENST00000494836 NBEAL2Q6ZNJ1 2754 aa12.01□□□□□ -0.49
YIF1A-209ENST00000494836 RPL35AP18077 110 aaKnown RBP12.01□□□□□ -0.49
YIF1A-209ENST00000494836 RPL29P47914 159 aaKnown RBP12.01□□□□□ -0.49
YIF1A-209ENST00000494836 PRR20EP86478 221 aa12.01□□□□□ -0.49
YIF1A-209ENST00000494836 PRR20CP86479 221 aa12.01□□□□□ -0.49
YIF1A-209ENST00000494836 PRR20DP86480 221 aa12.01□□□□□ -0.49
YIF1A-209ENST00000494836 PRR20BP86481 221 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms