RNA–Protein interactions for RNA: ENST00000494208.5

SLC8A3-206, Transcript of solute carrier family 8 member A3, humanhuman

TSL 1 (best)

Gene SLC8A3, Length 5,146 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8A3-206ENST00000494208 LIME1Q9H400 295 aa12.33□□□□□ -0.44
SLC8A3-206ENST00000494208 ZNF407Q9C0G0 2248 aa12.33□□□□□ -0.44
SLC8A3-206ENST00000494208 IGHV3-49A0A0A0MS15 119 aa12.33□□□□□ -0.44
SLC8A3-206ENST00000494208 FAM90A9PA6NNJ1 464 aa12.33□□□□□ -0.44
SLC8A3-206ENST00000494208 GGNQ86UU5 652 aa12.33□□□□□ -0.44
SLC8A3-206ENST00000494208 C1orf147Q96MC9 270 aaPredicted RBP12.33□□□□□ -0.44
SLC8A3-206ENST00000494208 C21orf62Q9NYP8 219 aa12.32□□□□□ -0.44
SLC8A3-206ENST00000494208 COL4A3Q01955 1670 aa12.32□□□□□ -0.44
SLC8A3-206ENST00000494208 SPTAN1Q13813 2472 aaKnown RBP12.32□□□□□ -0.44
SLC8A3-206ENST00000494208 SAA2-SAA4A0A096LPE2 208 aa12.32□□□□□ -0.44
SLC8A3-206ENST00000494208 RAMP3O60896 148 aa12.32□□□□□ -0.44
SLC8A3-206ENST00000494208 SAA2P0DJI9 122 aaPredicted RBP12.32□□□□□ -0.44
SLC8A3-206ENST00000494208 ZNF48Q96MX3 618 aaPredicted RBP12.32□□□□□ -0.44
SLC8A3-206ENST00000494208 ATP6V0BQ99437 205 aa12.32□□□□□ -0.44
SLC8A3-206ENST00000494208 TEX43Q6ZNM6 134 aa12.32□□□□□ -0.44
SLC8A3-206ENST00000494208 RPRMLQ8N4K4 120 aa12.32□□□□□ -0.44
SLC8A3-206ENST00000494208 STPG4Q8N801 248 aa12.32□□□□□ -0.44
SLC8A3-206ENST00000494208 IGHV1-18A0A0C4DH31 117 aa12.32□□□□□ -0.44
SLC8A3-206ENST00000494208 MRAP2Q96G30 205 aa12.32□□□□□ -0.44
SLC8A3-206ENST00000494208 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.31□□□□□ -0.44
SLC8A3-206ENST00000494208 C15orf61A6NNL5 157 aa12.31□□□□□ -0.44
SLC8A3-206ENST00000494208 SSBP2P81877 361 aaPredicted RBP12.31□□□□□ -0.44
SLC8A3-206ENST00000494208 LRRK1Q38SD2 2015 aa12.31□□□□□ -0.44
SLC8A3-206ENST00000494208 SAA1P0DJI8 122 aaPredicted RBP12.31□□□□□ -0.44
SLC8A3-206ENST00000494208 MORN2Q502X0 79 aa12.31□□□□□ -0.44
SLC8A3-206ENST00000494208 DMRTC2Q8IXT2 367 aaPredicted RBP12.31□□□□□ -0.44
SLC8A3-206ENST00000494208 PYYP10082 97 aa12.31□□□□□ -0.44
SLC8A3-206ENST00000494208 SNRPD3P62318 126 aaKnown RBP12.31□□□□□ -0.44
SLC8A3-206ENST00000494208 FAM168AQ92567 244 aa12.31□□□□□ -0.44
SLC8A3-206ENST00000494208 NABP1Q96AH0 204 aa12.31□□□□□ -0.44
SLC8A3-206ENST00000494208 ZNF815PA8K554 130 aa12.31□□□□□ -0.44
SLC8A3-206ENST00000494208 ABCA1O95477 2261 aa12.31□□□□□ -0.44
SLC8A3-206ENST00000494208 YPEL3P61236 119 aaPredicted RBP12.31□□□□□ -0.44
SLC8A3-206ENST00000494208 ARPC1AQ92747 370 aa12.31□□□□□ -0.44
SLC8A3-206ENST00000494208 DUX5Q96PT3 197 aa12.31□□□□□ -0.44
SLC8A3-206ENST00000494208 NUP210Q8TEM1 1887 aaPredicted RBP12.31□□□□□ -0.44
SLC8A3-206ENST00000494208 C9orf118A6NHY6 69 aa12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 PPP1R27Q86WC6 154 aa12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 OBSL1O75147 1896 aa12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 SRSF1Q07955 248 aaKnown RBP eCLIP12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 NUP37Q8NFH4 326 aa12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 NUP35Q8NFH5 326 aa12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 COL4A4P53420 1690 aaPredicted RBP12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 UPK2O00526 184 aa12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 FOXF2Q12947 444 aa12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 DOCK10Q96BY6 2186 aa12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 SMAD7O15105 426 aaKnown RBP12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 IGKV3-20P01619 116 aa12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 IGHV4-39P01824 125 aa12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 PRTN3P24158 256 aa12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 KLF17Q5JT82 389 aaPredicted RBP12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 FAM71F2Q6NXP2 309 aa12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 TSSC4Q9Y5U2 329 aaPredicted RBP12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 COL6A6A6NMZ7 2263 aa12.3□□□□□ -0.44
SLC8A3-206ENST00000494208 IGHV3-66A0A0C4DH42 116 aa12.29□□□□□ -0.44
SLC8A3-206ENST00000494208 KIR2DL5BA0A0G2JN68 375 aa12.29□□□□□ -0.44
SLC8A3-206ENST00000494208 KIR2DL5BA0A0G2JPC4 375 aa12.29□□□□□ -0.44
SLC8A3-206ENST00000494208 KIR2DL5AQ8N109 375 aa12.29□□□□□ -0.44
SLC8A3-206ENST00000494208 CD69Q07108 199 aa12.29□□□□□ -0.44
SLC8A3-206ENST00000494208 FAM159AQ6UWV7 190 aa12.29□□□□□ -0.44
SLC8A3-206ENST00000494208 TMEM238C9JI98 176 aa12.29□□□□□ -0.44
SLC8A3-206ENST00000494208 IGKV1-5P01602 117 aa12.29□□□□□ -0.44
SLC8A3-206ENST00000494208 PRB3Q04118 309 aaPredicted RBP12.29□□□□□ -0.44
SLC8A3-206ENST00000494208 FAM74A4Q5TZK3 123 aa12.29□□□□□ -0.44
SLC8A3-206ENST00000494208 HS3ST6Q96QI5 342 aa12.29□□□□□ -0.44
SLC8A3-206ENST00000494208 IGHV2-26A0A0B4J1V2 119 aa12.29□□□□□ -0.44
SLC8A3-206ENST00000494208 C7orf69Q9H7B7 122 aa12.29□□□□□ -0.44
SLC8A3-206ENST00000494208 C2orf16Q68DN1 1984 aa12.29□□□□□ -0.44
SLC8A3-206ENST00000494208 TRAV8-1A0A0A6YYK1 113 aa12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 SPACA3Q8IXA5 215 aa12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 IGHV3OR16-8A0A075B7F1 116 aa12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 A0A0G2JRQ6 117 aa12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 GTSCR1Q86UQ5 136 aa12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 PI4KAP42356 2102 aa12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 TMEM133Q9H2Q1 129 aa12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 TCRBV4S1A1TA0A5B7 111 aa12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 FABP5P3A8MUU1 101 aa12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 LYNX1G3V0Z9 82 aa12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 M0R381 172 aa12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 LYNX1P0DP58 116 aa12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 COA6Q5JTJ3 125 aaKnown RBP12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 SPATA31B1PQ5VZV4 182 aa12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 CITED1Q99966 193 aa12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 ERG28Q9UKR5 140 aa12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 PSG8Q9UQ74 426 aa12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 PKDREJQ9NTG1 2253 aa12.28□□□□□ -0.44
SLC8A3-206ENST00000494208 UBE2L6O14933 153 aa12.27□□□□□ -0.44
SLC8A3-206ENST00000494208 C18orf32Q8TCD1 76 aa12.27□□□□□ -0.44
SLC8A3-206ENST00000494208 SEPSECSQ9HD40 501 aaKnown RBP12.27□□□□□ -0.44
SLC8A3-206ENST00000494208 CHTOPQ9Y3Y2 248 aaKnown RBP12.27□□□□□ -0.44
SLC8A3-206ENST00000494208 KIF26AQ9ULI4 1882 aaPredicted RBP12.27□□□□□ -0.44
SLC8A3-206ENST00000494208 K7EP34 96 aa12.27□□□□□ -0.45
SLC8A3-206ENST00000494208 Q0VFX4 171 aa12.27□□□□□ -0.45
SLC8A3-206ENST00000494208 ORMDL2Q53FV1 153 aa12.27□□□□□ -0.45
SLC8A3-206ENST00000494208 NBR2O15453 112 aa12.27□□□□□ -0.45
SLC8A3-206ENST00000494208 ZNF56Q15929 161 aa12.27□□□□□ -0.45
SLC8A3-206ENST00000494208 IGHV1-46P01743 117 aa12.26□□□□□ -0.45
SLC8A3-206ENST00000494208 CD300EQ496F6 205 aaPredicted RBP12.26□□□□□ -0.45
SLC8A3-206ENST00000494208 TMEM190Q8WZ59 177 aa12.26□□□□□ -0.45
SLC8A3-206ENST00000494208 DUTP33316 252 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms