RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 GPR82Q96P67 336 aa11.4□□□□□ -0.58
ACTB-213ENST00000493945 IGHV7-4-1A0A0J9YVY3 117 aa11.39□□□□□ -0.59
ACTB-213ENST00000493945 HELTA6NFD8 242 aa11.39□□□□□ -0.59
ACTB-213ENST00000493945 PRR20EP86478 221 aa11.39□□□□□ -0.59
ACTB-213ENST00000493945 PRR20CP86479 221 aa11.39□□□□□ -0.59
ACTB-213ENST00000493945 PRR20DP86480 221 aa11.39□□□□□ -0.59
ACTB-213ENST00000493945 PRR20BP86481 221 aa11.39□□□□□ -0.59
ACTB-213ENST00000493945 PRR20AP86496 221 aa11.39□□□□□ -0.59
ACTB-213ENST00000493945 CD300CQ08708 224 aa11.39□□□□□ -0.59
ACTB-213ENST00000493945 FFAR4Q5NUL3 377 aa11.39□□□□□ -0.59
ACTB-213ENST00000493945 AKR1C8PQ5T2L2 129 aa11.39□□□□□ -0.59
ACTB-213ENST00000493945 MIC13Q5XKP0 118 aa11.39□□□□□ -0.59
ACTB-213ENST00000493945 UNQ9165/PRO28630Q6UXU0 137 aa11.39□□□□□ -0.59
ACTB-213ENST00000493945 C9orf62Q8N4C0 152 aa11.39□□□□□ -0.59
ACTB-213ENST00000493945 OR2K2Q8NGT1 345 aa11.39□□□□□ -0.59
ACTB-213ENST00000493945 OR2G3Q8NGZ4 309 aa11.39□□□□□ -0.59
ACTB-213ENST00000493945 STOML3Q8TAV4 291 aa11.39□□□□□ -0.59
ACTB-213ENST00000493945 MRPL32Q9BYC8 188 aaKnown RBP11.39□□□□□ -0.59
ACTB-213ENST00000493945 WFDC1Q9HC57 220 aa11.39□□□□□ -0.59
ACTB-213ENST00000493945 TMEM213A2RRL7 107 aa11.38□□□□□ -0.59
ACTB-213ENST00000493945 FOLR2P14207 255 aa11.38□□□□□ -0.59
ACTB-213ENST00000493945 CBLN1P23435 193 aa11.38□□□□□ -0.59
ACTB-213ENST00000493945 CRYBB3P26998 211 aa11.38□□□□□ -0.59
ACTB-213ENST00000493945 ATP6V0CP27449 155 aa11.38□□□□□ -0.59
ACTB-213ENST00000493945 TAS2R45P59539 299 aa11.38□□□□□ -0.59
ACTB-213ENST00000493945 LGALSLQ3ZCW2 172 aaPredicted RBP11.38□□□□□ -0.59
ACTB-213ENST00000493945 C1orf194Q5T5A4 169 aa11.38□□□□□ -0.59
ACTB-213ENST00000493945 BAP18Q8IXM2 172 aa11.38□□□□□ -0.59
ACTB-213ENST00000493945 WFDC9Q8NEX5 89 aa11.38□□□□□ -0.59
ACTB-213ENST00000493945 RSG1Q9BU20 258 aa11.38□□□□□ -0.59
ACTB-213ENST00000493945 ARV1Q9H2C2 271 aa11.38□□□□□ -0.59
ACTB-213ENST00000493945 DNAJC4Q9NNZ3 241 aa11.38□□□□□ -0.59
ACTB-213ENST00000493945 DOK5Q9P104 306 aa11.38□□□□□ -0.59
ACTB-213ENST00000493945 A0A1W2PPV4 95 aa11.37□□□□□ -0.59
ACTB-213ENST00000493945 M6PRP20645 277 aa11.37□□□□□ -0.59
ACTB-213ENST00000493945 GATA2P23769 480 aaPredicted RBP11.37□□□□□ -0.59
ACTB-213ENST00000493945 RHOBP62745 196 aa11.37□□□□□ -0.59
ACTB-213ENST00000493945 USF2Q15853 346 aaPredicted RBP11.37□□□□□ -0.59
ACTB-213ENST00000493945 TM4SF20Q53R12 229 aa11.37□□□□□ -0.59
ACTB-213ENST00000493945 SAMD13Q5VXD3 122 aa11.37□□□□□ -0.59
ACTB-213ENST00000493945 LCN12Q6JVE5 192 aa11.37□□□□□ -0.59
ACTB-213ENST00000493945 RBPMS2Q6ZRY4 209 aaKnown RBP11.37□□□□□ -0.59
ACTB-213ENST00000493945 STXBP6Q8NFX7 210 aa11.37□□□□□ -0.59
ACTB-213ENST00000493945 SMPXQ9UHP9 88 aa11.37□□□□□ -0.59
ACTB-213ENST00000493945 IGHV3OR16-8A0A075B7F1 116 aa11.36□□□□□ -0.59
ACTB-213ENST00000493945 TRAV25A0A0B4J276 109 aa11.36□□□□□ -0.59
ACTB-213ENST00000493945 UMAD1C9J7I0 102 aa11.36□□□□□ -0.59
ACTB-213ENST00000493945 ZNF207O43670 478 aaKnown RBP11.36□□□□□ -0.59
ACTB-213ENST00000493945 SEC11BP0C7V7 166 aa11.36□□□□□ -0.59
ACTB-213ENST00000493945 C8orf88P0DMB2 117 aa11.36□□□□□ -0.59
ACTB-213ENST00000493945 RPL7P18124 248 aaKnown RBP11.36□□□□□ -0.59
ACTB-213ENST00000493945 GALR1P47211 349 aa11.36□□□□□ -0.59
ACTB-213ENST00000493945 MEOX2P50222 304 aa11.36□□□□□ -0.59
ACTB-213ENST00000493945 PAFAH1B2P68402 229 aa11.36□□□□□ -0.59
ACTB-213ENST00000493945 LINC00305Q7Z4B0 112 aa11.36□□□□□ -0.59
ACTB-213ENST00000493945 OR8I2Q8N0Y5 310 aa11.36□□□□□ -0.59
ACTB-213ENST00000493945 RHPN1-AS1Q9BWJ2 59 aa11.36□□□□□ -0.59
ACTB-213ENST00000493945 SLC25A39Q9BZJ4 359 aaPredicted RBP11.36□□□□□ -0.59
ACTB-213ENST00000493945 SLC25A32Q9H2D1 315 aa11.36□□□□□ -0.59
ACTB-213ENST00000493945 H3BRN7 92 aa11.35□□□□□ -0.59
ACTB-213ENST00000493945 CSN3P07498 182 aa11.35□□□□□ -0.59
ACTB-213ENST00000493945 TMEM41BQ5BJD5 291 aa11.35□□□□□ -0.59
ACTB-213ENST00000493945 PHYHIPLQ96FC7 376 aa11.35□□□□□ -0.59
ACTB-213ENST00000493945 SHANK2-AS3Q9BTD1 123 aa11.35□□□□□ -0.59
ACTB-213ENST00000493945 VSIRQ9H7M9 311 aa11.35□□□□□ -0.59
ACTB-213ENST00000493945 CYTL1Q9NRR1 136 aa11.35□□□□□ -0.59
ACTB-213ENST00000493945 CHEK1O14757 476 aa11.34□□□□□ -0.59
ACTB-213ENST00000493945 SPP1P10451 314 aa11.34□□□□□ -0.59
ACTB-213ENST00000493945 ATF4P18848 351 aaPredicted RBP11.34□□□□□ -0.59
ACTB-213ENST00000493945 RAB5CP51148 216 aa11.34□□□□□ -0.59
ACTB-213ENST00000493945 NKX2-5P52952 324 aaPredicted RBP11.34□□□□□ -0.59
ACTB-213ENST00000493945 RPL11P62913 178 aaKnown RBP11.34□□□□□ -0.59
ACTB-213ENST00000493945 KHDC3LQ587J8 217 aa11.34□□□□□ -0.59
ACTB-213ENST00000493945 FAM78BQ5VT40 261 aa11.34□□□□□ -0.59
ACTB-213ENST00000493945 DPPA3Q6W0C5 159 aa11.34□□□□□ -0.59
ACTB-213ENST00000493945 BPIFA4PQ86YQ2 179 aa11.34□□□□□ -0.59
ACTB-213ENST00000493945 OR10G4Q8NGN3 311 aa11.34□□□□□ -0.59
ACTB-213ENST00000493945 OR10G9Q8NGN4 311 aa11.34□□□□□ -0.59
ACTB-213ENST00000493945 OR10G7Q8NGN6 311 aa11.34□□□□□ -0.59
ACTB-213ENST00000493945 ST8SIA2Q92186 375 aa11.34□□□□□ -0.59
ACTB-213ENST00000493945 SLC25A22Q9H936 323 aa11.34□□□□□ -0.59
ACTB-213ENST00000493945 ZNF98A6NK75 572 aa11.33□□□□□ -0.6
ACTB-213ENST00000493945 TEX46H3BTG2 121 aa11.33□□□□□ -0.6
ACTB-213ENST00000493945 BUB3O43684 328 aa11.33□□□□□ -0.6
ACTB-213ENST00000493945 CDC34P49427 236 aaPredicted RBP11.33□□□□□ -0.6
ACTB-213ENST00000493945 SIGLEC15Q6ZMC9 328 aa11.33□□□□□ -0.6
ACTB-213ENST00000493945 TMEM182Q6ZP80 229 aaPredicted RBP11.33□□□□□ -0.6
ACTB-213ENST00000493945 ACTR3CQ9C0K3 210 aaPredicted RBP11.33□□□□□ -0.6
ACTB-213ENST00000493945 FUT9Q9Y231 359 aa11.33□□□□□ -0.6
ACTB-213ENST00000493945 U3KQE9 123 aa11.33□□□□□ -0.6
ACTB-213ENST00000493945 BOLA2-SMG1P6H3BVE0 249 aa11.32□□□□□ -0.6
ACTB-213ENST00000493945 C16orf54Q6UWD8 224 aa11.32□□□□□ -0.6
ACTB-213ENST00000493945 TCF24Q7RTU0 167 aa11.32□□□□□ -0.6
ACTB-213ENST00000493945 SPAG8Q99932 426 aaPredicted RBP11.32□□□□□ -0.6
ACTB-213ENST00000493945 SH3BGRL3Q9H299 93 aa11.32□□□□□ -0.6
ACTB-213ENST00000493945 IGHV3-49A0A0A0MS15 119 aa11.31□□□□□ -0.6
ACTB-213ENST00000493945 OR4C46A6NHA9 309 aa11.31□□□□□ -0.6
ACTB-213ENST00000493945 DNASE2O00115 360 aaPredicted RBP11.31□□□□□ -0.6
ACTB-213ENST00000493945 WIPF1O43516 503 aa11.31□□□□□ -0.6
ACTB-213ENST00000493945 IGLV1-51P01701 117 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms