RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 GATAD1Q8WUU5 269 aa16.61■□□□□ 0.25
SNIP1-203ENST00000493916 C2orf50Q96LR7 162 aa16.61■□□□□ 0.25
SNIP1-203ENST00000493916 DYNC2H1Q8NCM8 4307 aaKnown RBP16.6■□□□□ 0.25
SNIP1-203ENST00000493916 K7EPK0 472 aa16.6■□□□□ 0.25
SNIP1-203ENST00000493916 PSMG4Q5JS54 123 aa16.6■□□□□ 0.25
SNIP1-203ENST00000493916 TMEM182Q6ZP80 229 aaPredicted RBP16.6■□□□□ 0.25
SNIP1-203ENST00000493916 PPP1R14BQ96C90 147 aa16.6■□□□□ 0.25
SNIP1-203ENST00000493916 RYR3Q15413 4870 aa16.59■□□□□ 0.25
SNIP1-203ENST00000493916 CA1P00915 261 aaPredicted RBP16.59■□□□□ 0.25
SNIP1-203ENST00000493916 RRAS2P62070 204 aaPredicted RBP16.59■□□□□ 0.25
SNIP1-203ENST00000493916 CYP2G1PQ6ZSU1 146 aa16.59■□□□□ 0.25
SNIP1-203ENST00000493916 GGACTQ9BVM4 153 aa16.59■□□□□ 0.25
SNIP1-203ENST00000493916 MGAT4CQ9UBM8 478 aa16.59■□□□□ 0.25
SNIP1-203ENST00000493916 KNCNA6PVL3 124 aa16.58■□□□□ 0.24
SNIP1-203ENST00000493916 L7N2F9 121 aa16.58■□□□□ 0.24
SNIP1-203ENST00000493916 GATA2P23769 480 aaPredicted RBP16.58■□□□□ 0.24
SNIP1-203ENST00000493916 S100A7P31151 101 aa16.58■□□□□ 0.24
SNIP1-203ENST00000493916 VAMP2P63027 116 aa16.58■□□□□ 0.24
SNIP1-203ENST00000493916 GSG1LQ6UXU4 331 aa16.58■□□□□ 0.24
SNIP1-203ENST00000493916 C11orf1Q9H5F2 150 aa16.58■□□□□ 0.24
SNIP1-203ENST00000493916 GPN1Q9HCN4 374 aaPredicted RBP16.58■□□□□ 0.24
SNIP1-203ENST00000493916 NPVFQ9HCQ7 196 aa16.58■□□□□ 0.24
SNIP1-203ENST00000493916 LSM5Q9Y4Y9 91 aaKnown RBP16.58■□□□□ 0.24
SNIP1-203ENST00000493916 A0A0J9YWU9 116 aa16.57■□□□□ 0.24
SNIP1-203ENST00000493916 SPP1P10451 314 aa16.57■□□□□ 0.24
SNIP1-203ENST00000493916 ORM2P19652 201 aa16.57■□□□□ 0.24
SNIP1-203ENST00000493916 SELENOTP62341 195 aa16.57■□□□□ 0.24
SNIP1-203ENST00000493916 ARL16Q0P5N6 197 aa16.57■□□□□ 0.24
SNIP1-203ENST00000493916 IL15RAQ13261 267 aa16.57■□□□□ 0.24
SNIP1-203ENST00000493916 TMEM41BQ5BJD5 291 aa16.57■□□□□ 0.24
SNIP1-203ENST00000493916 ACTL10Q5JWF8 245 aa16.57■□□□□ 0.24
SNIP1-203ENST00000493916 MORN3Q6PF18 240 aaPredicted RBP16.57■□□□□ 0.24
SNIP1-203ENST00000493916 NRARPQ7Z6K4 114 aa16.57■□□□□ 0.24
SNIP1-203ENST00000493916 OR8I2Q8N0Y5 310 aa16.57■□□□□ 0.24
SNIP1-203ENST00000493916 TMEM147Q9BVK8 224 aa16.57■□□□□ 0.24
SNIP1-203ENST00000493916 ZNF98A6NK75 572 aa16.56■□□□□ 0.24
SNIP1-203ENST00000493916 SOCS3O14543 225 aa16.56■□□□□ 0.24
SNIP1-203ENST00000493916 DEDDO75618 318 aa16.56■□□□□ 0.24
SNIP1-203ENST00000493916 ATF4P18848 351 aaPredicted RBP16.56■□□□□ 0.24
SNIP1-203ENST00000493916 PLP1P60201 277 aa16.56■□□□□ 0.24
SNIP1-203ENST00000493916 TEPPQ6URK8 271 aa16.56■□□□□ 0.24
SNIP1-203ENST00000493916 OR1B1Q8NGR6 318 aa16.56■□□□□ 0.24
SNIP1-203ENST00000493916 TENM2Q9NT68 2774 aa16.56■□□□□ 0.24
SNIP1-203ENST00000493916 PRAF2O60831 178 aa16.55■□□□□ 0.24
SNIP1-203ENST00000493916 PSMB3P49720 205 aa16.55■□□□□ 0.24
SNIP1-203ENST00000493916 SAMD13Q5VXD3 122 aa16.55■□□□□ 0.24
SNIP1-203ENST00000493916 SLC25A32Q9H2D1 315 aa16.55■□□□□ 0.24
SNIP1-203ENST00000493916 GIG44P09565 113 aaPredicted RBP16.54■□□□□ 0.24
SNIP1-203ENST00000493916 LINC00869P0C866 280 aa16.54■□□□□ 0.24
SNIP1-203ENST00000493916 PVALBP20472 110 aaPredicted RBP16.54■□□□□ 0.24
SNIP1-203ENST00000493916 ID1P41134 155 aa16.54■□□□□ 0.24
SNIP1-203ENST00000493916 GALR1P47211 349 aa16.54■□□□□ 0.24
SNIP1-203ENST00000493916 DEFA1P59665 94 aa16.54■□□□□ 0.24
SNIP1-203ENST00000493916 DEFA3P59666 94 aa16.54■□□□□ 0.24
SNIP1-203ENST00000493916 RARRES2Q99969 163 aa16.54■□□□□ 0.24
SNIP1-203ENST00000493916 INMT-MINDY4F8WBC2 141 aa16.53■□□□□ 0.24
SNIP1-203ENST00000493916 HYPMO75409 117 aa16.53■□□□□ 0.24
SNIP1-203ENST00000493916 MEOX2P50222 304 aa16.53■□□□□ 0.24
SNIP1-203ENST00000493916 BCAP31P51572 246 aa16.53■□□□□ 0.24
SNIP1-203ENST00000493916 CAV2P51636 162 aa16.53■□□□□ 0.24
SNIP1-203ENST00000493916 S100A10P60903 97 aa16.53■□□□□ 0.24
SNIP1-203ENST00000493916 RAB32Q13637 225 aa16.53■□□□□ 0.24
SNIP1-203ENST00000493916 TMEM217Q8N7C4 229 aa16.53■□□□□ 0.24
SNIP1-203ENST00000493916 GPR82Q96P67 336 aa16.53■□□□□ 0.24
SNIP1-203ENST00000493916 LYSTQ99698 3801 aa16.53■□□□□ 0.24
SNIP1-203ENST00000493916 MARVELD1Q9BSK0 173 aa16.53■□□□□ 0.24
SNIP1-203ENST00000493916 SLC25A22Q9H936 323 aa16.53■□□□□ 0.24
SNIP1-203ENST00000493916 H3BRN7 92 aa16.52■□□□□ 0.24
SNIP1-203ENST00000493916 ISLRO14498 428 aa16.52■□□□□ 0.24
SNIP1-203ENST00000493916 C4BPBP20851 252 aa16.52■□□□□ 0.24
SNIP1-203ENST00000493916 SLC38A11Q08AI6 406 aa16.52■□□□□ 0.24
SNIP1-203ENST00000493916 ZNF546Q86UE3 836 aa16.52■□□□□ 0.24
SNIP1-203ENST00000493916 OR11H2Q8NH07 326 aa16.52■□□□□ 0.24
SNIP1-203ENST00000493916 SHANK2-AS3Q9BTD1 123 aa16.52■□□□□ 0.24
SNIP1-203ENST00000493916 SLC25A39Q9BZJ4 359 aaPredicted RBP16.52■□□□□ 0.24
SNIP1-203ENST00000493916 LYRM2Q9NU23 88 aaPredicted RBP16.52■□□□□ 0.24
SNIP1-203ENST00000493916 DOK5Q9P104 306 aa16.52■□□□□ 0.24
SNIP1-203ENST00000493916 HIGD1AQ9Y241 93 aa16.52■□□□□ 0.24
SNIP1-203ENST00000493916 H3BMM0 161 aa16.51■□□□□ 0.23
SNIP1-203ENST00000493916 HLA-DRB4P13762 266 aa16.51■□□□□ 0.23
SNIP1-203ENST00000493916 RAP2BP61225 183 aa16.51■□□□□ 0.23
SNIP1-203ENST00000493916 EWSR1Q01844 656 aaKnown RBP eCLIP16.51■□□□□ 0.23
SNIP1-203ENST00000493916 PXDC1Q5TGL8 231 aa16.51■□□□□ 0.23
SNIP1-203ENST00000493916 SCRT1Q9BWW7 348 aa16.51■□□□□ 0.23
SNIP1-203ENST00000493916 C11orf68Q9H3H3 251 aaKnown RBP16.51■□□□□ 0.23
SNIP1-203ENST00000493916 HLA-DRB4X5D2U9 266 aa16.51■□□□□ 0.23
SNIP1-203ENST00000493916 FAM24AA6NFZ4 105 aa16.5■□□□□ 0.23
SNIP1-203ENST00000493916 S100A7AQ86SG5 101 aa16.5■□□□□ 0.23
SNIP1-203ENST00000493916 C17orf77Q96MU5 243 aa16.5■□□□□ 0.23
SNIP1-203ENST00000493916 GOSR2O14653 212 aa16.49■□□□□ 0.23
SNIP1-203ENST00000493916 AGPAT2O15120 278 aa16.49■□□□□ 0.23
SNIP1-203ENST00000493916 CST7O76096 145 aa16.49■□□□□ 0.23
SNIP1-203ENST00000493916 SULT1A1P50225 295 aa16.49■□□□□ 0.23
SNIP1-203ENST00000493916 FOXI2Q6ZQN5 318 aa16.49■□□□□ 0.23
SNIP1-203ENST00000493916 LINC00052Q96N35 136 aa16.49■□□□□ 0.23
SNIP1-203ENST00000493916 MGST2Q99735 147 aa16.49■□□□□ 0.23
SNIP1-203ENST00000493916 RSG1Q9BU20 258 aa16.49■□□□□ 0.23
SNIP1-203ENST00000493916 SAV1Q9H4B6 383 aaPredicted RBP16.49■□□□□ 0.23
SNIP1-203ENST00000493916 SACSQ9NZJ4 4579 aa16.49■□□□□ 0.23
SNIP1-203ENST00000493916 OR5G3P0C626 314 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms