RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 NPCDR1Q9BY65 106 aa13.44□□□□□ -0.26
PDLIM7-208ENST00000493815 WDR61Q9GZS3 305 aaKnown RBP13.44□□□□□ -0.26
PDLIM7-208ENST00000493815 CFDP00746 253 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-208ENST00000493815 OR5G3P0C626 314 aa13.44□□□□□ -0.26
PDLIM7-208ENST00000493815 RPL11P62913 178 aaKnown RBP13.44□□□□□ -0.26
PDLIM7-208ENST00000493815 CD300CQ08708 224 aa13.44□□□□□ -0.26
PDLIM7-208ENST00000493815 TCF24Q7RTU0 167 aa13.44□□□□□ -0.26
PDLIM7-208ENST00000493815 GBGT1Q8N5D6 347 aa13.44□□□□□ -0.26
PDLIM7-208ENST00000493815 UHRF2Q96PU4 802 aa13.44□□□□□ -0.26
PDLIM7-208ENST00000493815 SORL1Q92673 2214 aa13.43□□□□□ -0.26
PDLIM7-208ENST00000493815 A0A1W2PS18 150 aa13.43□□□□□ -0.26
PDLIM7-208ENST00000493815 BUB3O43684 328 aa13.43□□□□□ -0.26
PDLIM7-208ENST00000493815 HYPMO75409 117 aa13.43□□□□□ -0.26
PDLIM7-208ENST00000493815 TFPI2P48307 235 aa13.43□□□□□ -0.26
PDLIM7-208ENST00000493815 PRR20EP86478 221 aa13.43□□□□□ -0.26
PDLIM7-208ENST00000493815 PRR20CP86479 221 aa13.43□□□□□ -0.26
PDLIM7-208ENST00000493815 PRR20DP86480 221 aa13.43□□□□□ -0.26
PDLIM7-208ENST00000493815 PRR20BP86481 221 aa13.43□□□□□ -0.26
PDLIM7-208ENST00000493815 PRR20AP86496 221 aa13.43□□□□□ -0.26
PDLIM7-208ENST00000493815 OPCMLQ14982 345 aa13.43□□□□□ -0.26
PDLIM7-208ENST00000493815 FAM90A2PQ658T7 463 aa13.43□□□□□ -0.26
PDLIM7-208ENST00000493815 LEMD1Q68G75 181 aa13.43□□□□□ -0.26
PDLIM7-208ENST00000493815 PATE2Q6UY27 113 aa13.43□□□□□ -0.26
PDLIM7-208ENST00000493815 OR2K2Q8NGT1 345 aa13.43□□□□□ -0.26
PDLIM7-208ENST00000493815 RFNGQ9Y644 331 aa13.43□□□□□ -0.26
PDLIM7-208ENST00000493815 BMI1P35226 326 aa13.42□□□□□ -0.26
PDLIM7-208ENST00000493815 B2MP61769 119 aa13.42□□□□□ -0.26
PDLIM7-208ENST00000493815 LAMTOR1Q6IAA8 161 aa13.42□□□□□ -0.26
PDLIM7-208ENST00000493815 C16orf54Q6UWD8 224 aa13.42□□□□□ -0.26
PDLIM7-208ENST00000493815 RSG1Q9BU20 258 aa13.42□□□□□ -0.26
PDLIM7-208ENST00000493815 ZMAT5Q9UDW3 170 aaKnown RBP13.42□□□□□ -0.26
PDLIM7-208ENST00000493815 PXMP4Q9Y6I8 212 aa13.42□□□□□ -0.26
PDLIM7-208ENST00000493815 MPDU1O75352 247 aa13.41□□□□□ -0.26
PDLIM7-208ENST00000493815 IFNA5P01569 189 aa13.41□□□□□ -0.26
PDLIM7-208ENST00000493815 PLP1P60201 277 aa13.41□□□□□ -0.26
PDLIM7-208ENST00000493815 AKAP14Q86UN6 197 aa13.41□□□□□ -0.26
PDLIM7-208ENST00000493815 GLMPQ8WWB7 406 aa13.41□□□□□ -0.26
PDLIM7-208ENST00000493815 GRAMD2BQ96HH9 432 aa13.41□□□□□ -0.26
PDLIM7-208ENST00000493815 SCRT1Q9BWW7 348 aa13.41□□□□□ -0.26
PDLIM7-208ENST00000493815 MFFQ9GZY8 342 aa13.41□□□□□ -0.26
PDLIM7-208ENST00000493815 TMEM231Q9H6L2 316 aa13.41□□□□□ -0.26
PDLIM7-208ENST00000493815 SLC25A22Q9H936 323 aa13.41□□□□□ -0.26
PDLIM7-208ENST00000493815 SLC39A9Q9NUM3 307 aa13.41□□□□□ -0.26
PDLIM7-208ENST00000493815 HIGD1AQ9Y241 93 aa13.41□□□□□ -0.26
PDLIM7-208ENST00000493815 K7EIL1 84 aa13.4□□□□□ -0.26
PDLIM7-208ENST00000493815 TSPAN4O14817 238 aa13.4□□□□□ -0.26
PDLIM7-208ENST00000493815 RPL29P47914 159 aaKnown RBP13.4□□□□□ -0.26
PDLIM7-208ENST00000493815 GCSAMLQ5JQS6 135 aa13.4□□□□□ -0.26
PDLIM7-208ENST00000493815 WFDC3Q8IUB2 231 aa13.4□□□□□ -0.26
PDLIM7-208ENST00000493815 SCGB1C1Q8TD33 95 aa13.4□□□□□ -0.26
PDLIM7-208ENST00000493815 TMEM37Q8WXS4 190 aa13.4□□□□□ -0.26
PDLIM7-208ENST00000493815 SLC25A39Q9BZJ4 359 aaPredicted RBP13.4□□□□□ -0.26
PDLIM7-208ENST00000493815 ARV1Q9H2C2 271 aa13.4□□□□□ -0.26
PDLIM7-208ENST00000493815 TRAV25A0A0B4J276 109 aa13.4□□□□□ -0.26
PDLIM7-208ENST00000493815 ZNF98A6NK75 572 aa13.4□□□□□ -0.26
PDLIM7-208ENST00000493815 COX7A2P2O60397 106 aa13.4□□□□□ -0.26
PDLIM7-208ENST00000493815 CD7P09564 240 aa13.4□□□□□ -0.26
PDLIM7-208ENST00000493815 Q6ZRG5 221 aa13.4□□□□□ -0.26
PDLIM7-208ENST00000493815 TCTE3Q8IZS6 198 aa13.4□□□□□ -0.26
PDLIM7-208ENST00000493815 ZNF709Q8N972 641 aa13.4□□□□□ -0.26
PDLIM7-208ENST00000493815 MORN5Q5VZ52 161 aa13.39□□□□□ -0.27
PDLIM7-208ENST00000493815 STXBP6Q8NFX7 210 aa13.39□□□□□ -0.27
PDLIM7-208ENST00000493815 SPAG8Q99932 426 aaPredicted RBP13.39□□□□□ -0.27
PDLIM7-208ENST00000493815 NEURL2Q9BR09 285 aa13.39□□□□□ -0.27
PDLIM7-208ENST00000493815 MS4A6AQ9H2W1 248 aa13.39□□□□□ -0.27
PDLIM7-208ENST00000493815 PFDN2Q9UHV9 154 aa13.39□□□□□ -0.27
PDLIM7-208ENST00000493815 H3BRN7 92 aa13.38□□□□□ -0.27
PDLIM7-208ENST00000493815 CD81P60033 236 aa13.38□□□□□ -0.27
PDLIM7-208ENST00000493815 RPL7L1Q6DKI1 246 aaKnown RBP13.38□□□□□ -0.27
PDLIM7-208ENST00000493815 SIGLEC15Q6ZMC9 328 aa13.38□□□□□ -0.27
PDLIM7-208ENST00000493815 LINC00305Q7Z4B0 112 aa13.38□□□□□ -0.27
PDLIM7-208ENST00000493815 OR8I2Q8N0Y5 310 aa13.38□□□□□ -0.27
PDLIM7-208ENST00000493815 HSD17B11Q8NBQ5 300 aa13.38□□□□□ -0.27
PDLIM7-208ENST00000493815 SHANK2-AS3Q9BTD1 123 aa13.38□□□□□ -0.27
PDLIM7-208ENST00000493815 WFDC10AQ9H1F0 79 aa13.38□□□□□ -0.27
PDLIM7-208ENST00000493815 CXCL2P19875 107 aa13.37□□□□□ -0.27
PDLIM7-208ENST00000493815 C10orf113Q5VZT2 155 aa13.37□□□□□ -0.27
PDLIM7-208ENST00000493815 GTSCR1Q86UQ5 136 aa13.37□□□□□ -0.27
PDLIM7-208ENST00000493815 Q8N1Y9 231 aa13.37□□□□□ -0.27
PDLIM7-208ENST00000493815 SLC25A32Q9H2D1 315 aa13.37□□□□□ -0.27
PDLIM7-208ENST00000493815 DNAJC4Q9NNZ3 241 aa13.37□□□□□ -0.27
PDLIM7-208ENST00000493815 HMSDA8MTL9 139 aa13.37□□□□□ -0.27
PDLIM7-208ENST00000493815 DNASE2O00115 360 aaPredicted RBP13.37□□□□□ -0.27
PDLIM7-208ENST00000493815 ZNF266Q14584 549 aa13.37□□□□□ -0.27
PDLIM7-208ENST00000493815 PXDC1Q5TGL8 231 aa13.37□□□□□ -0.27
PDLIM7-208ENST00000493815 PARD6GQ9BYG4 376 aaPredicted RBP13.37□□□□□ -0.27
PDLIM7-208ENST00000493815 UBQLN2Q9UHD9 624 aa13.37□□□□□ -0.27
PDLIM7-208ENST00000493815 ELOA3CA0A087WX78 387 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-208ENST00000493815 HELTA6NFD8 242 aa13.36□□□□□ -0.27
PDLIM7-208ENST00000493815 C17orf112F2Z3M2 114 aa13.36□□□□□ -0.27
PDLIM7-208ENST00000493815 CD5P06127 495 aa13.36□□□□□ -0.27
PDLIM7-208ENST00000493815 DEFB121Q5J5C9 76 aa13.36□□□□□ -0.27
PDLIM7-208ENST00000493815 C1orf194Q5T5A4 169 aa13.36□□□□□ -0.27
PDLIM7-208ENST00000493815 FAM24BQ8N5W8 94 aa13.36□□□□□ -0.27
PDLIM7-208ENST00000493815 TRAV5A0A0B4J249 113 aa13.35□□□□□ -0.27
PDLIM7-208ENST00000493815 PAFAH1B2P68402 229 aa13.35□□□□□ -0.27
PDLIM7-208ENST00000493815 FFAR4Q5NUL3 377 aa13.35□□□□□ -0.27
PDLIM7-208ENST00000493815 KCNRGQ8N5I3 272 aa13.35□□□□□ -0.27
PDLIM7-208ENST00000493815 MRAPQ8TCY5 172 aa13.35□□□□□ -0.27
PDLIM7-208ENST00000493815 SH3BGRL3Q9H299 93 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms