RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 C9orf66Q5T8R8 295 aa9.3□□□□□ -0.92
UPF3A-210ENST00000493727 RPL7L1Q6DKI1 246 aaKnown RBP9.3□□□□□ -0.92
UPF3A-210ENST00000493727 BTNL8Q6UX41 500 aa9.3□□□□□ -0.92
UPF3A-210ENST00000493727 C18orf65Q6ZTR6 163 aa9.3□□□□□ -0.92
UPF3A-210ENST00000493727 ZNF709Q8N972 641 aa9.3□□□□□ -0.92
UPF3A-210ENST00000493727 RAX2Q96IS3 184 aa9.3□□□□□ -0.92
UPF3A-210ENST00000493727 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.29□□□□□ -0.92
UPF3A-210ENST00000493727 PPP5D1E7EU14 171 aa9.29□□□□□ -0.92
UPF3A-210ENST00000493727 TGOLN2O43493 480 aa9.29□□□□□ -0.92
UPF3A-210ENST00000493727 MPDU1O75352 247 aa9.29□□□□□ -0.92
UPF3A-210ENST00000493727 JTBO76095 146 aa9.29□□□□□ -0.92
UPF3A-210ENST00000493727 CLEC3BP05452 202 aa9.29□□□□□ -0.92
UPF3A-210ENST00000493727 NHLRC4P0CG21 123 aaPredicted RBP9.29□□□□□ -0.92
UPF3A-210ENST00000493727 TIGITQ495A1 244 aa9.29□□□□□ -0.92
UPF3A-210ENST00000493727 LAMTOR1Q6IAA8 161 aa9.29□□□□□ -0.92
UPF3A-210ENST00000493727 ZNF343Q6P1L6 599 aa9.29□□□□□ -0.92
UPF3A-210ENST00000493727 THAP8Q8NA92 274 aa9.29□□□□□ -0.92
UPF3A-210ENST00000493727 HSD17B11Q8NBQ5 300 aa9.29□□□□□ -0.92
UPF3A-210ENST00000493727 C4orf3Q8WVX3 66 aa9.29□□□□□ -0.92
UPF3A-210ENST00000493727 WDR61Q9GZS3 305 aaKnown RBP9.29□□□□□ -0.92
UPF3A-210ENST00000493727 PEF1Q9UBV8 284 aaKnown RBP9.29□□□□□ -0.92
UPF3A-210ENST00000493727 WDR83OSQ9Y284 106 aa9.29□□□□□ -0.92
UPF3A-210ENST00000493727 C17orf112F2Z3M2 114 aa9.28□□□□□ -0.92
UPF3A-210ENST00000493727 IGLC1P0CG04 106 aa9.28□□□□□ -0.92
UPF3A-210ENST00000493727 TPT1P13693 172 aaKnown RBP9.28□□□□□ -0.92
UPF3A-210ENST00000493727 CAMLGP49069 296 aa9.28□□□□□ -0.92
UPF3A-210ENST00000493727 RELQ04864 619 aaPredicted RBP9.28□□□□□ -0.92
UPF3A-210ENST00000493727 KIAA0141Q14154 515 aaPredicted RBP9.28□□□□□ -0.92
UPF3A-210ENST00000493727 SPSB3Q6PJ21 355 aa9.28□□□□□ -0.92
UPF3A-210ENST00000493727 CYP2G1PQ6ZSU1 146 aa9.28□□□□□ -0.92
UPF3A-210ENST00000493727 TRGV9Q99603 122 aa9.28□□□□□ -0.92
UPF3A-210ENST00000493727 MGST2Q99735 147 aa9.28□□□□□ -0.92
UPF3A-210ENST00000493727 KCNIP2Q9NS61 270 aa9.28□□□□□ -0.92
UPF3A-210ENST00000493727 CSMD3Q7Z407 3707 aa9.27□□□□□ -0.93
UPF3A-210ENST00000493727 AGPAT2O15120 278 aa9.27□□□□□ -0.93
UPF3A-210ENST00000493727 GGCTO75223 188 aaKnown RBP9.27□□□□□ -0.93
UPF3A-210ENST00000493727 YIF1AO95070 293 aa9.27□□□□□ -0.93
UPF3A-210ENST00000493727 TRBV12-3P01733 135 aa9.27□□□□□ -0.93
UPF3A-210ENST00000493727 INSL3P51460 131 aa9.27□□□□□ -0.93
UPF3A-210ENST00000493727 RUNX1Q01196 453 aa9.27□□□□□ -0.93
UPF3A-210ENST00000493727 ZNF90Q03938 601 aa9.27□□□□□ -0.93
UPF3A-210ENST00000493727 ZNF616Q08AN1 781 aa9.27□□□□□ -0.93
UPF3A-210ENST00000493727 RNF151Q2KHN1 245 aa9.27□□□□□ -0.93
UPF3A-210ENST00000493727 SLC51BQ86UW2 128 aa9.27□□□□□ -0.93
UPF3A-210ENST00000493727 BPIFCQ8NFQ6 507 aa9.27□□□□□ -0.93
UPF3A-210ENST00000493727 DUX3Q96PT4 197 aa9.27□□□□□ -0.93
UPF3A-210ENST00000493727 RSG1Q9BU20 258 aa9.27□□□□□ -0.93
UPF3A-210ENST00000493727 CHRDL1Q9BU40 450 aa9.27□□□□□ -0.93
UPF3A-210ENST00000493727 NPCDR1Q9BY65 106 aa9.27□□□□□ -0.93
UPF3A-210ENST00000493727 PARD6GQ9BYG4 376 aaPredicted RBP9.27□□□□□ -0.93
UPF3A-210ENST00000493727 CYTL1Q9NRR1 136 aa9.27□□□□□ -0.93
UPF3A-210ENST00000493727 LSM4Q9Y4Z0 139 aaKnown RBP9.27□□□□□ -0.93
UPF3A-210ENST00000493727 IGKV1D-37A0A075B6S9 117 aa9.26□□□□□ -0.93
UPF3A-210ENST00000493727 IGKV1OR2-108A0A075B7D4 117 aa9.26□□□□□ -0.93
UPF3A-210ENST00000493727 IGHV3-35A0A0C4DH35 117 aa9.26□□□□□ -0.93
UPF3A-210ENST00000493727 SEC14L6B5MCN3 397 aa9.26□□□□□ -0.93
UPF3A-210ENST00000493727 I3L521 148 aa9.26□□□□□ -0.93
UPF3A-210ENST00000493727 BMPR1BO00238 502 aa9.26□□□□□ -0.93
UPF3A-210ENST00000493727 HSPB1P04792 205 aaKnown RBP9.26□□□□□ -0.93
UPF3A-210ENST00000493727 CTSGP08311 255 aa9.26□□□□□ -0.93
UPF3A-210ENST00000493727 RD3LP0DJH9 198 aa9.26□□□□□ -0.93
UPF3A-210ENST00000493727 SELENOTP62341 195 aa9.26□□□□□ -0.93
UPF3A-210ENST00000493727 FHL3Q13643 280 aa9.26□□□□□ -0.93
UPF3A-210ENST00000493727 RPEL1Q2QD12 228 aa9.26□□□□□ -0.93
UPF3A-210ENST00000493727 DEFB136Q30KP8 78 aa9.26□□□□□ -0.93
UPF3A-210ENST00000493727 ZNF600Q6ZNG1 722 aa9.26□□□□□ -0.93
UPF3A-210ENST00000493727 Q8WTZ3 238 aa9.26□□□□□ -0.93
UPF3A-210ENST00000493727 GNPNAT1Q96EK6 184 aaPredicted RBP9.26□□□□□ -0.93
UPF3A-210ENST00000493727 GGTLC1Q9BX51 225 aa9.26□□□□□ -0.93
UPF3A-210ENST00000493727 HYDINQ4G0P3 5121 aa9.26□□□□□ -0.93
UPF3A-210ENST00000493727 IGHV4OR15-8A0A075B7B6 117 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 A0A087WW49 117 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 LINC01619G3V211 115 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 OR2C1O95371 312 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 TOMM40O96008 361 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 IGKV1-17P01599 117 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 PSG1P11464 419 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 ZP3P21754 424 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 GATA2P23769 480 aaPredicted RBP9.25□□□□□ -0.93
UPF3A-210ENST00000493727 ATP6V0CP27449 155 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 ELLP55199 621 aaPredicted RBP9.25□□□□□ -0.93
UPF3A-210ENST00000493727 YPEL3P61236 119 aaPredicted RBP9.25□□□□□ -0.93
UPF3A-210ENST00000493727 LYZP61626 148 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 B2MP61769 119 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 MIC13Q5XKP0 118 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 BAP18Q8IXM2 172 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 OR11H1Q8NG94 326 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 OR51G1Q8NGK1 321 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 OR1N2Q8NGR9 330 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 ST8SIA2Q92186 375 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 GINS3Q9BRX5 216 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 PBDC1Q9BVG4 233 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 SLC45A2Q9UMX9 530 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 TIMM9Q9Y5J7 89 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 PUS1Q9Y606 427 aaKnown RBP eCLIP9.25□□□□□ -0.93
UPF3A-210ENST00000493727 PXMP4Q9Y6I8 212 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 U3KQK5 164 aa9.25□□□□□ -0.93
UPF3A-210ENST00000493727 CFDP00746 253 aaPredicted RBP9.24□□□□□ -0.93
UPF3A-210ENST00000493727 IL4P05112 153 aa9.24□□□□□ -0.93
UPF3A-210ENST00000493727 LINC00869P0C866 280 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms