RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 TVP23BQ9NYZ1 205 aa-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 UTP11Q9Y3A2 253 aaKnown RBP-0.03□□□□□ -2.41
SYCP1-208ENST00000493377 RTL1A6NKG5 1358 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 DOCK4Q8N1I0 1966 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 OR2T8A6NH00 312 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 A8MWV9 139 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 E7EUB6 86 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 HAND1O96004 215 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 SERPINE1P05121 402 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 C8GP07360 202 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 DSCR4P56555 118 aaPredicted RBP-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 DYNLT1P63172 113 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 EDDM3AQ14507 147 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 C2orf82Q6UX34 121 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 ST6GALNAC3Q8NDV1 305 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 CMSS1Q9BQ75 279 aaKnown RBP-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 PRADC1Q9BSG0 188 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 PARVBQ9HBI1 364 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 C14orf105Q9NVL8 296 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 IDI2-AS1Q9NZ38 188 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 TNFSF18Q9UNG2 199 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 FMN1Q68DA7 1419 aa-0.04□□□□□ -2.42
SYCP1-208ENST00000493377 PTPRDP23468 1912 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 hCG_1818297A0A087WSY0 165 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 SMIM23A6NLE4 172 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 A8MT66 165 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 M0R378 163 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 KLF7O75840 302 aaPredicted RBP-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 GADD45GO95257 159 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 DNAL4O96015 105 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 SRIP30626 198 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 SPINK7P58062 85 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 C22orf39Q6P5X5 142 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 SLC30A7Q8NEW0 376 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 OR52L1Q8NGH7 329 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 OR2T35Q8NGX2 323 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 OR10AC1Q8NH08 325 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 FAM172AQ8WUF8 416 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 PSMF1Q92530 271 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 YPEL2Q96QA6 119 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 CCDC94Q9BW85 323 aaPredicted RBP-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 PSTPIP2Q9H939 334 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 PLB1Q6P1J6 1458 aa-0.05□□□□□ -2.42
SYCP1-208ENST00000493377 DMBT1Q9UGM3 2413 aaPredicted RBP-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 ARHGEF11O15085 1522 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 COL24A1Q17RW2 1714 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 TRGV10A0A0A0MS01 117 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 TRAV10A0A0B4J240 114 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 TRAV4A0A0B4J268 109 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 SMIM9A6NGZ8 99 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 CYB5BO43169 146 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 TIMM17BO60830 172 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 DEFA1P59665 94 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 RANP62826 216 aaKnown RBP-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 EIF5AP63241 154 aaKnown RBP-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 RRN3P1Q2M238 152 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 TMEM97Q5BJF2 176 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 C4orf22Q6V702 233 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 Q6ZS92 163 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 PDZD9Q8IXQ8 264 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 OR10K1Q8NGX5 313 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 SLC25A40Q8TBP6 338 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 DDI1Q8WTU0 396 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 CANT1Q8WVQ1 401 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 PARD6GQ9BYG4 376 aaPredicted RBP-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 TRIM4Q9C037 500 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 RNASE7Q9H1E1 156 aaKnown RBP-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 UQCC1Q9NVA1 299 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 TAS2R7Q9NYW3 318 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 GLTPQ9NZD2 209 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 JPT1Q9UK76 154 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 FBXO5Q9UKT4 447 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 ADCY9O60503 1353 aa-0.06□□□□□ -2.42
SYCP1-208ENST00000493377 DSTQ03001 7570 aaKnown RBP-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 MYO5AQ9Y4I1 1855 aaKnown RBP-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 TRBV19A0A075B6N1 114 aa-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 PDE6DO43924 150 aa-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 COX7CP15954 63 aa-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 LSM6P62312 80 aaKnown RBP-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 RHOBP62745 196 aa-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 RGS21Q2M5E4 152 aa-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 LYRM7Q5U5X0 104 aa-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 PTRHD1Q6GMV3 140 aaKnown RBP-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 GLIPR1L1Q6UWM5 242 aa-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 TRAPPC5Q8IUR0 188 aa-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 OR51A2Q8NGJ7 313 aa-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 ZNF431Q8TF32 576 aaPredicted RBP-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 ZC2HC1AQ96GY0 325 aa-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 TEX37Q96LM6 180 aa-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 NABP2Q9BQ15 211 aa-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 FAM103A1Q9BTL3 118 aaKnown RBP-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 HSPB8Q9UJY1 196 aa-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 PCTPQ9UKL6 214 aa-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 PRELID3BQ9Y3B1 194 aa-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 LY96Q9Y6Y9 160 aa-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 TRPM1Q7Z4N2 1603 aa-0.07□□□□□ -2.42
SYCP1-208ENST00000493377 PTPRZ1P23471 2315 aaPredicted RBP-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 C1orf196B1AJZ1 125 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 B4DSR2 109 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms