RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 FHL3Q13643 280 aa10.24□□□□□ -0.77
MSH6-208ENST00000493177 UNQ9165/PRO28630Q6UXU0 137 aa10.24□□□□□ -0.77
MSH6-208ENST00000493177 STOML3Q8TAV4 291 aa10.24□□□□□ -0.77
MSH6-208ENST00000493177 TMEM190Q8WZ59 177 aa10.24□□□□□ -0.77
MSH6-208ENST00000493177 DLX4Q92988 240 aaPredicted RBP10.24□□□□□ -0.77
MSH6-208ENST00000493177 PSMG3Q9BT73 122 aaPredicted RBP10.24□□□□□ -0.77
MSH6-208ENST00000493177 ARV1Q9H2C2 271 aa10.24□□□□□ -0.77
MSH6-208ENST00000493177 RABAC1Q9UI14 185 aa10.24□□□□□ -0.77
MSH6-208ENST00000493177 UFC1Q9Y3C8 167 aa10.24□□□□□ -0.77
MSH6-208ENST00000493177 MEGF8Q7Z7M0 2845 aa10.24□□□□□ -0.77
MSH6-208ENST00000493177 WI2-2373I1.2A0A1W2PRP0 233 aa10.23□□□□□ -0.77
MSH6-208ENST00000493177 K7EIL1 84 aa10.23□□□□□ -0.77
MSH6-208ENST00000493177 HYPMO75409 117 aa10.23□□□□□ -0.77
MSH6-208ENST00000493177 EGFEM1PQ0D2K5 195 aa10.23□□□□□ -0.77
MSH6-208ENST00000493177 KLF5Q13887 457 aaPredicted RBP10.23□□□□□ -0.77
MSH6-208ENST00000493177 USF2Q15853 346 aaPredicted RBP10.23□□□□□ -0.77
MSH6-208ENST00000493177 ACOT6Q3I5F7 207 aaPredicted RBP10.23□□□□□ -0.77
MSH6-208ENST00000493177 OR1L4Q8NGR5 311 aa10.23□□□□□ -0.77
MSH6-208ENST00000493177 ZNF414Q96IQ9 312 aa10.23□□□□□ -0.77
MSH6-208ENST00000493177 METTL26Q96S19 204 aa10.23□□□□□ -0.77
MSH6-208ENST00000493177 ZFAND3Q9H8U3 227 aa10.23□□□□□ -0.77
MSH6-208ENST00000493177 LGALS9O00182 355 aa10.22□□□□□ -0.77
MSH6-208ENST00000493177 OVOL1O14753 267 aa10.22□□□□□ -0.77
MSH6-208ENST00000493177 SPP1P10451 314 aa10.22□□□□□ -0.77
MSH6-208ENST00000493177 TM4SF20Q53R12 229 aa10.22□□□□□ -0.77
MSH6-208ENST00000493177 AKR1C8PQ5T2L2 129 aa10.22□□□□□ -0.77
MSH6-208ENST00000493177 PXDC1Q5TGL8 231 aa10.22□□□□□ -0.77
MSH6-208ENST00000493177 C10orf113Q5VZT2 155 aa10.22□□□□□ -0.77
MSH6-208ENST00000493177 EIF5AL1Q6IS14 154 aaKnown RBP10.22□□□□□ -0.77
MSH6-208ENST00000493177 TMED6Q8WW62 240 aa10.22□□□□□ -0.77
MSH6-208ENST00000493177 NARS2Q96I59 477 aaKnown RBP10.22□□□□□ -0.77
MSH6-208ENST00000493177 PFDN5Q99471 154 aa10.22□□□□□ -0.77
MSH6-208ENST00000493177 PEMTQ9UBM1 199 aa10.22□□□□□ -0.77
MSH6-208ENST00000493177 HIGD1AQ9Y241 93 aa10.22□□□□□ -0.77
MSH6-208ENST00000493177 IGHV3-49A0A0A0MS15 119 aa10.21□□□□□ -0.77
MSH6-208ENST00000493177 SAP30O75446 220 aa10.21□□□□□ -0.77
MSH6-208ENST00000493177 MBP02144 154 aa10.21□□□□□ -0.77
MSH6-208ENST00000493177 SEC11BP0C7V7 166 aa10.21□□□□□ -0.77
MSH6-208ENST00000493177 NPPCP23582 126 aa10.21□□□□□ -0.77
MSH6-208ENST00000493177 S100A7P31151 101 aa10.21□□□□□ -0.77
MSH6-208ENST00000493177 PLP1P60201 277 aa10.21□□□□□ -0.77
MSH6-208ENST00000493177 SERF2P84101 59 aa10.21□□□□□ -0.77
MSH6-208ENST00000493177 GCSAMLQ5JQS6 135 aa10.21□□□□□ -0.77
MSH6-208ENST00000493177 S100A7AQ86SG5 101 aa10.21□□□□□ -0.77
MSH6-208ENST00000493177 OR9G4Q8NGQ1 327 aa10.21□□□□□ -0.77
MSH6-208ENST00000493177 DNAJC4Q9NNZ3 241 aa10.21□□□□□ -0.77
MSH6-208ENST00000493177 DAZ1Q9NQZ3 744 aaKnown RBP10.21□□□□□ -0.77
MSH6-208ENST00000493177 PFDN2Q9UHV9 154 aa10.21□□□□□ -0.77
MSH6-208ENST00000493177 NOTCH3Q9UM47 2321 aa10.21□□□□□ -0.78
MSH6-208ENST00000493177 IGHV3OR16-13A0A075B7E8 117 aa10.2□□□□□ -0.78
MSH6-208ENST00000493177 ELOA3CA0A087WX78 387 aaPredicted RBP10.2□□□□□ -0.78
MSH6-208ENST00000493177 IGHV3-74A0A0B4J1X5 117 aa10.2□□□□□ -0.78
MSH6-208ENST00000493177 IGHV3-66A0A0C4DH42 116 aa10.2□□□□□ -0.78
MSH6-208ENST00000493177 K7EMT4 169 aa10.2□□□□□ -0.78
MSH6-208ENST00000493177 M6PRP20645 277 aa10.2□□□□□ -0.78
MSH6-208ENST00000493177 NOTCH1P46531 2555 aa10.2□□□□□ -0.78
MSH6-208ENST00000493177 RAB2AP61019 212 aa10.2□□□□□ -0.78
MSH6-208ENST00000493177 TMEM41BQ5BJD5 291 aa10.2□□□□□ -0.78
MSH6-208ENST00000493177 FAM122CQ6P4D5 195 aa10.2□□□□□ -0.78
MSH6-208ENST00000493177 PATE2Q6UY27 113 aa10.2□□□□□ -0.78
MSH6-208ENST00000493177 OR10G4Q8NGN3 311 aa10.2□□□□□ -0.78
MSH6-208ENST00000493177 OR10G9Q8NGN4 311 aa10.2□□□□□ -0.78
MSH6-208ENST00000493177 OR10G7Q8NGN6 311 aa10.2□□□□□ -0.78
MSH6-208ENST00000493177 ELOVL1Q9BW60 279 aa10.2□□□□□ -0.78
MSH6-208ENST00000493177 VSIRQ9H7M9 311 aa10.2□□□□□ -0.78
MSH6-208ENST00000493177 IGHV7-4-1A0A0J9YVY3 117 aa10.19□□□□□ -0.78
MSH6-208ENST00000493177 TMEM213A2RRL7 107 aa10.19□□□□□ -0.78
MSH6-208ENST00000493177 A8MWP6 167 aa10.19□□□□□ -0.78
MSH6-208ENST00000493177 EDN2P20800 178 aa10.19□□□□□ -0.78
MSH6-208ENST00000493177 INSL3P51460 131 aa10.19□□□□□ -0.78
MSH6-208ENST00000493177 FAM78BQ5VT40 261 aa10.19□□□□□ -0.78
MSH6-208ENST00000493177 LINC00305Q7Z4B0 112 aa10.19□□□□□ -0.78
MSH6-208ENST00000493177 GATAD1Q8WUU5 269 aa10.19□□□□□ -0.78
MSH6-208ENST00000493177 TMEM37Q8WXS4 190 aa10.19□□□□□ -0.78
MSH6-208ENST00000493177 UHRF2Q96PU4 802 aa10.19□□□□□ -0.78
MSH6-208ENST00000493177 PRR25Q96S07 402 aa10.19□□□□□ -0.78
MSH6-208ENST00000493177 RNF2Q99496 336 aa10.19□□□□□ -0.78
MSH6-208ENST00000493177 SLC25A39Q9BZJ4 359 aaPredicted RBP10.19□□□□□ -0.78
MSH6-208ENST00000493177 SLC25A22Q9H936 323 aa10.19□□□□□ -0.78
MSH6-208ENST00000493177 MRPL27Q9P0M9 148 aaKnown RBP10.19□□□□□ -0.78
MSH6-208ENST00000493177 A0A1W2PPV4 95 aa10.18□□□□□ -0.78
MSH6-208ENST00000493177 A0A1W2PS18 150 aa10.18□□□□□ -0.78
MSH6-208ENST00000493177 C2orf70A6NJV1 201 aa10.18□□□□□ -0.78
MSH6-208ENST00000493177 APOHP02749 345 aaPredicted RBP10.18□□□□□ -0.78
MSH6-208ENST00000493177 CRYBB3P26998 211 aa10.18□□□□□ -0.78
MSH6-208ENST00000493177 BMI1P35226 326 aa10.18□□□□□ -0.78
MSH6-208ENST00000493177 RHOBP62745 196 aa10.18□□□□□ -0.78
MSH6-208ENST00000493177 ALKAL2Q6UX46 152 aa10.18□□□□□ -0.78
MSH6-208ENST00000493177 DYNLRB2Q8TF09 96 aa10.18□□□□□ -0.78
MSH6-208ENST00000493177 PHYHIPLQ96FC7 376 aa10.18□□□□□ -0.78
MSH6-208ENST00000493177 GRAMD2BQ96HH9 432 aa10.18□□□□□ -0.78
MSH6-208ENST00000493177 SCRT1Q9BWW7 348 aa10.18□□□□□ -0.78
MSH6-208ENST00000493177 TMEM231Q9H6L2 316 aa10.18□□□□□ -0.78
MSH6-208ENST00000493177 SMPXQ9UHP9 88 aa10.18□□□□□ -0.78
MSH6-208ENST00000493177 ZNF256Q9Y2P7 627 aaPredicted RBP10.18□□□□□ -0.78
MSH6-208ENST00000493177 UMAD1C9J7I0 102 aa10.17□□□□□ -0.78
MSH6-208ENST00000493177 H3BRN7 92 aa10.17□□□□□ -0.78
MSH6-208ENST00000493177 CSN3P07498 182 aa10.17□□□□□ -0.78
MSH6-208ENST00000493177 FOLR2P14207 255 aa10.17□□□□□ -0.78
MSH6-208ENST00000493177 CDC34P49427 236 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms