RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 OR1S1Q8NH92 325 aa6.01□□□□□ -1.45
SMARCB1-207ENST00000491967 BATF3Q9NR55 127 aa6.01□□□□□ -1.45
SMARCB1-207ENST00000491967 ZFP92A6NM28 416 aa6□□□□□ -1.45
SMARCB1-207ENST00000491967 IGLL5B9A064 214 aa6□□□□□ -1.45
SMARCB1-207ENST00000491967 SYNGR2O43760 224 aa6□□□□□ -1.45
SMARCB1-207ENST00000491967 MED6O75586 246 aa6□□□□□ -1.45
SMARCB1-207ENST00000491967 AMBPP02760 352 aa6□□□□□ -1.45
SMARCB1-207ENST00000491967 UBE2MP61081 183 aaKnown RBP6□□□□□ -1.45
SMARCB1-207ENST00000491967 ID3Q02535 119 aa6□□□□□ -1.45
SMARCB1-207ENST00000491967 PPP1R1AQ13522 171 aa6□□□□□ -1.45
SMARCB1-207ENST00000491967 SAMD13Q5VXD3 122 aa6□□□□□ -1.45
SMARCB1-207ENST00000491967 GGNBP1Q5YKI7 109 aa6□□□□□ -1.45
SMARCB1-207ENST00000491967 OR4D5Q8NGN0 318 aa6□□□□□ -1.45
SMARCB1-207ENST00000491967 SLC35E1Q96K37 410 aa6□□□□□ -1.45
SMARCB1-207ENST00000491967 CIB3Q96Q77 187 aaPredicted RBP6□□□□□ -1.45
SMARCB1-207ENST00000491967 XCL2Q9UBD3 114 aa6□□□□□ -1.45
SMARCB1-207ENST00000491967 CELA1Q9UNI1 258 aa6□□□□□ -1.45
SMARCB1-207ENST00000491967 IGHV4-4A0A075B6R2 117 aa5.99□□□□□ -1.45
SMARCB1-207ENST00000491967 PMS2P5A8MQ11 134 aa5.99□□□□□ -1.45
SMARCB1-207ENST00000491967 ID1P41134 155 aa5.99□□□□□ -1.45
SMARCB1-207ENST00000491967 RAB11AP62491 216 aa5.99□□□□□ -1.45
SMARCB1-207ENST00000491967 OXA1LQ15070 435 aa5.99□□□□□ -1.45
SMARCB1-207ENST00000491967 CNPY1Q3B7I2 92 aa5.99□□□□□ -1.45
SMARCB1-207ENST00000491967 PYDC2Q56P42 97 aa5.99□□□□□ -1.45
SMARCB1-207ENST00000491967 AMTNQ6UX39 209 aa5.99□□□□□ -1.45
SMARCB1-207ENST00000491967 TMEM182Q6ZP80 229 aaPredicted RBP5.99□□□□□ -1.45
SMARCB1-207ENST00000491967 TMED4Q7Z7H5 227 aa5.99□□□□□ -1.45
SMARCB1-207ENST00000491967 SRRQ9GZT4 340 aa5.99□□□□□ -1.45
SMARCB1-207ENST00000491967 HERC2O95714 4834 aa5.99□□□□□ -1.45
SMARCB1-207ENST00000491967 RYR1P21817 5038 aa5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 DEFB131BA0A096LNP1 70 aa5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 A0A0J9YX75 114 aa5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 C9orf170A2RU37 121 aa5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 TMEM189A5PLL7 270 aa5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 VAMP1P23763 118 aa5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 MEOX2P50222 304 aa5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 DEFB1P60022 68 aa5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 PLP1P60201 277 aa5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 RPP30P78346 268 aaKnown RBP5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 C4orf46Q504U0 113 aa5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 TMEM144Q7Z5S9 345 aa5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 OR8I2Q8N0Y5 310 aa5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 C1orf158Q8N1D5 194 aa5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 CENPSQ8N2Z9 138 aa5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 FAM210BQ96KR6 192 aa5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 C20orf173Q96LM9 149 aa5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 PBDC1Q9BVG4 233 aa5.98□□□□□ -1.45
SMARCB1-207ENST00000491967 NAP1L6A6NFF2 107 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 ZNF98A6NK75 572 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 FNDC10F2Z333 226 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 K7EPK0 472 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 NDUFB6O95139 128 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 SPART-AS1P0CW21 52 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 IAPPP10997 89 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 LYZP61626 148 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 PSG9Q00887 426 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 OR2F1Q13607 317 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 FAM78BQ5VT40 261 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 POM121L12Q8N7R1 296 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 OR1B1Q8NGR6 318 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 SMIM8Q96KF7 97 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 LINC00052Q96N35 136 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 GPR82Q96P67 336 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 SDHCQ99643 169 aaPredicted RBP5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 SCRT1Q9BWW7 348 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 MAGT1Q9H0U3 335 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 SLC35B3Q9H1N7 401 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 SLC25A32Q9H2D1 315 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 DKK2Q9UBU2 259 aa5.97□□□□□ -1.45
SMARCB1-207ENST00000491967 HECTD4Q9Y4D8 3996 aa5.96□□□□□ -1.45
SMARCB1-207ENST00000491967 NACAE9PAV3 2078 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 TRAV8-2A0A0B4J237 113 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 TEX48A0A1B0GUV7 120 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 A0A1B0GVY2 172 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 F6UB75 175 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 WRBO00258 174 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 HOXB5P09067 269 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 S100A5P33763 92 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 BTCP35070 178 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 GALR1P47211 349 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 BAK1Q16611 211 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 TMEM14EPQ6UXP3 125 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 SHANK2-AS3Q9BTD1 123 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 RSG1Q9BU20 258 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 NDUFAF3Q9BU61 184 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 RPRMQ9NS64 109 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 DOK5Q9P104 306 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 STRAPQ9Y3F4 350 aaKnown RBP5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 RFNGQ9Y644 331 aa5.96□□□□□ -1.46
SMARCB1-207ENST00000491967 H3BRN7 92 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 CRXO43186 299 aaPredicted RBP5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 ADAP1O75689 374 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 P0DMU3 169 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 FAM231AP0DMU4 169 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 FAM231CP0DMU5 169 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 GATA2P23769 480 aaPredicted RBP5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 S100A7P31151 101 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 TAS2R30P59541 319 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 POLR2GP62487 172 aaKnown RBP eCLIP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms