RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 OR4D5Q8NGN0 318 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 FAM210BQ96KR6 192 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 SAV1Q9H4B6 383 aaPredicted RBP6.33□□□□□ -1.4
NUP50-217ENST00000491860 RPRMQ9NS64 109 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 XCL2Q9UBD3 114 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 APLNQ9ULZ1 77 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 RFNGQ9Y644 331 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 VPS13DQ5THJ4 4388 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 ELOA3CA0A087WX78 387 aaPredicted RBP6.32□□□□□ -1.4
NUP50-217ENST00000491860 DEFB131BA0A096LNP1 70 aa6.32□□□□□ -1.4
NUP50-217ENST00000491860 NAP1L6A6NFF2 107 aa6.32□□□□□ -1.4
NUP50-217ENST00000491860 SYNGR2O43760 224 aa6.32□□□□□ -1.4
NUP50-217ENST00000491860 SFT2D2O95562 160 aa6.32□□□□□ -1.4
NUP50-217ENST00000491860 AMBPP02760 352 aa6.32□□□□□ -1.4
NUP50-217ENST00000491860 SPART-AS1P0CW21 52 aa6.32□□□□□ -1.4
NUP50-217ENST00000491860 INPP1P49441 399 aa6.32□□□□□ -1.4
NUP50-217ENST00000491860 PAX9P55771 341 aa6.32□□□□□ -1.4
NUP50-217ENST00000491860 SPANXN2Q5MJ10 180 aa6.32□□□□□ -1.4
NUP50-217ENST00000491860 ZNF705AQ6ZN79 300 aaPredicted RBP6.32□□□□□ -1.4
NUP50-217ENST00000491860 Q6ZTC4 211 aa6.32□□□□□ -1.4
NUP50-217ENST00000491860 LINC00336Q6ZUF6 198 aa6.32□□□□□ -1.4
NUP50-217ENST00000491860 TRIM63Q969Q1 353 aa6.32□□□□□ -1.4
NUP50-217ENST00000491860 LINC00052Q96N35 136 aa6.32□□□□□ -1.4
NUP50-217ENST00000491860 NDUFAF3Q9BU61 184 aa6.32□□□□□ -1.4
NUP50-217ENST00000491860 CLEC5AQ9NY25 188 aa6.32□□□□□ -1.4
NUP50-217ENST00000491860 PRR13Q9NZ81 148 aa6.32□□□□□ -1.4
NUP50-217ENST00000491860 PAIP2BQ9ULR5 123 aaKnown RBP6.32□□□□□ -1.4
NUP50-217ENST00000491860 GOLT1BQ9Y3E0 138 aa6.32□□□□□ -1.4
NUP50-217ENST00000491860 IGKV1D-37A0A075B6S9 117 aa6.31□□□□□ -1.4
NUP50-217ENST00000491860 CCDC160A6NGH7 325 aa6.31□□□□□ -1.4
NUP50-217ENST00000491860 ZNF705FA8MVS1 300 aaPredicted RBP6.31□□□□□ -1.4
NUP50-217ENST00000491860 WRBO00258 174 aa6.31□□□□□ -1.4
NUP50-217ENST00000491860 DEDDO75618 318 aa6.31□□□□□ -1.4
NUP50-217ENST00000491860 IFNA21P01568 189 aa6.31□□□□□ -1.4
NUP50-217ENST00000491860 ZNF705DP0CH99 300 aaPredicted RBP6.31□□□□□ -1.4
NUP50-217ENST00000491860 ZNF705BP0CI00 300 aaPredicted RBP6.31□□□□□ -1.4
NUP50-217ENST00000491860 B2MP61769 119 aa6.31□□□□□ -1.4
NUP50-217ENST00000491860 PSG9Q00887 426 aa6.31□□□□□ -1.4
NUP50-217ENST00000491860 ZNF90Q03938 601 aa6.31□□□□□ -1.4
NUP50-217ENST00000491860 OXA1LQ15070 435 aa6.31□□□□□ -1.4
NUP50-217ENST00000491860 CNPY1Q3B7I2 92 aa6.31□□□□□ -1.4
NUP50-217ENST00000491860 OR1B1Q8NGR6 318 aa6.31□□□□□ -1.4
NUP50-217ENST00000491860 C16orf92Q96LL3 132 aa6.31□□□□□ -1.4
NUP50-217ENST00000491860 TMEM147Q9BVK8 224 aa6.31□□□□□ -1.4
NUP50-217ENST00000491860 STRAPQ9Y3F4 350 aaKnown RBP6.31□□□□□ -1.4
NUP50-217ENST00000491860 CENPXA8MT69 81 aa6.3□□□□□ -1.4
NUP50-217ENST00000491860 ZNF701M0R085 212 aaPredicted RBP6.3□□□□□ -1.4
NUP50-217ENST00000491860 SOCS3O14543 225 aa6.3□□□□□ -1.4
NUP50-217ENST00000491860 DUSP14O95147 198 aaKnown RBP6.3□□□□□ -1.4
NUP50-217ENST00000491860 HBE1P02100 147 aa6.3□□□□□ -1.4
NUP50-217ENST00000491860 IAPPP10997 89 aa6.3□□□□□ -1.4
NUP50-217ENST00000491860 SELENOTP62341 195 aa6.3□□□□□ -1.4
NUP50-217ENST00000491860 AKR1C1Q04828 323 aa6.3□□□□□ -1.4
NUP50-217ENST00000491860 ZNF79Q15937 498 aa6.3□□□□□ -1.4
NUP50-217ENST00000491860 C12orf74Q32Q52 190 aa6.3□□□□□ -1.4
NUP50-217ENST00000491860 TRIQKQ629K1 86 aa6.3□□□□□ -1.4
NUP50-217ENST00000491860 OR4B1Q8NGF8 309 aa6.3□□□□□ -1.4
NUP50-217ENST00000491860 C7orf50Q9BRJ6 194 aaKnown RBP6.3□□□□□ -1.4
NUP50-217ENST00000491860 DOK5Q9P104 306 aa6.3□□□□□ -1.4
NUP50-217ENST00000491860 V9GYH0 126 aa6.3□□□□□ -1.4
NUP50-217ENST00000491860 ZNF98A6NK75 572 aa6.29□□□□□ -1.4
NUP50-217ENST00000491860 FNDC10F2Z333 226 aa6.29□□□□□ -1.4
NUP50-217ENST00000491860 HOXB5P09067 269 aa6.29□□□□□ -1.4
NUP50-217ENST00000491860 RAP2BP61225 183 aa6.29□□□□□ -1.4
NUP50-217ENST00000491860 PPP1R1AQ13522 171 aa6.29□□□□□ -1.4
NUP50-217ENST00000491860 OR2F1Q13607 317 aa6.29□□□□□ -1.4
NUP50-217ENST00000491860 SPANXN5Q5MJ07 72 aa6.29□□□□□ -1.4
NUP50-217ENST00000491860 PXDC1Q5TGL8 231 aa6.29□□□□□ -1.4
NUP50-217ENST00000491860 TMEM144Q7Z5S9 345 aa6.29□□□□□ -1.4
NUP50-217ENST00000491860 CCDC190Q86UF4 302 aa6.29□□□□□ -1.4
NUP50-217ENST00000491860 POM121L12Q8N7R1 296 aa6.29□□□□□ -1.4
NUP50-217ENST00000491860 WDR12Q9GZL7 423 aaKnown RBP6.29□□□□□ -1.4
NUP50-217ENST00000491860 IGKV1OR2-108A0A075B7D4 117 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 A0A0J9YX75 114 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 PRSS46E5RG02 174 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 NDUFB6O95139 128 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 IGKV3-20P01619 116 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 IL5P05113 134 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 RPL7P18124 248 aaKnown RBP6.28□□□□□ -1.4
NUP50-217ENST00000491860 ORM2P19652 201 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 TAS2R30P59541 319 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 PRR20EP86478 221 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 PRR20CP86479 221 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 PRR20DP86480 221 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 PRR20BP86481 221 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 PRR20AP86496 221 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 ID3Q02535 119 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 RRN3P1Q2M238 152 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 FAM78BQ5VT40 261 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 ZNF709Q8N972 641 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 NIPSNAP3BQ9BS92 247 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 TMEM208Q9BTX3 173 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 RSG1Q9BU20 258 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 MAGT1Q9H0U3 335 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 SLC25A22Q9H936 323 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 PSENENQ9NZ42 101 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 CELA1Q9UNI1 258 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 PKHD1P08F94 4074 aa6.28□□□□□ -1.4
NUP50-217ENST00000491860 IGHV3OR16-12A0A075B7B8 117 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 C9orf170A2RU37 121 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms