RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 CIB3Q96Q77 187 aaPredicted RBP13.23□□□□□ -0.29
SMIM4-205ENST00000491607 TMED3Q9Y3Q3 217 aa13.23□□□□□ -0.29
SMIM4-205ENST00000491607 IGKV1OR2-108A0A075B7D4 117 aa13.22□□□□□ -0.29
SMIM4-205ENST00000491607 WRBO00258 174 aa13.22□□□□□ -0.29
SMIM4-205ENST00000491607 SYNGR2O43760 224 aa13.22□□□□□ -0.29
SMIM4-205ENST00000491607 SFT2D2O95562 160 aa13.22□□□□□ -0.29
SMIM4-205ENST00000491607 HOXB5P09067 269 aa13.22□□□□□ -0.29
SMIM4-205ENST00000491607 EMP1P54849 157 aa13.22□□□□□ -0.29
SMIM4-205ENST00000491607 ZNF79Q15937 498 aa13.22□□□□□ -0.29
SMIM4-205ENST00000491607 RNF126Q9BV68 326 aa13.22□□□□□ -0.29
SMIM4-205ENST00000491607 SOCS3O14543 225 aa13.21□□□□□ -0.29
SMIM4-205ENST00000491607 ZNF705AQ6ZN79 300 aaPredicted RBP13.21□□□□□ -0.29
SMIM4-205ENST00000491607 THAP8Q8NA92 274 aa13.21□□□□□ -0.29
SMIM4-205ENST00000491607 SLC25A22Q9H936 323 aa13.21□□□□□ -0.29
SMIM4-205ENST00000491607 H3BP45 60 aa13.2□□□□□ -0.3
SMIM4-205ENST00000491607 AMBPP02760 352 aa13.2□□□□□ -0.3
SMIM4-205ENST00000491607 SPANXN5Q5MJ07 72 aa13.2□□□□□ -0.3
SMIM4-205ENST00000491607 GGNBP1Q5YKI7 109 aa13.2□□□□□ -0.3
SMIM4-205ENST00000491607 EBLN2Q6P2I7 272 aa13.2□□□□□ -0.3
SMIM4-205ENST00000491607 DEDD2Q8WXF8 326 aa13.2□□□□□ -0.3
SMIM4-205ENST00000491607 C16orf92Q96LL3 132 aa13.2□□□□□ -0.3
SMIM4-205ENST00000491607 NEU1Q99519 415 aa13.2□□□□□ -0.3
SMIM4-205ENST00000491607 SLC35B3Q9H1N7 401 aa13.2□□□□□ -0.3
SMIM4-205ENST00000491607 DNAH10Q8IVF4 4471 aa13.2□□□□□ -0.3
SMIM4-205ENST00000491607 VPS13DQ5THJ4 4388 aa13.2□□□□□ -0.3
SMIM4-205ENST00000491607 ZNF705FA8MVS1 300 aaPredicted RBP13.19□□□□□ -0.3
SMIM4-205ENST00000491607 F6UB75 175 aa13.19□□□□□ -0.3
SMIM4-205ENST00000491607 ISLRO14498 428 aa13.19□□□□□ -0.3
SMIM4-205ENST00000491607 CFDP00746 253 aaPredicted RBP13.19□□□□□ -0.3
SMIM4-205ENST00000491607 ZNF705DP0CH99 300 aaPredicted RBP13.19□□□□□ -0.3
SMIM4-205ENST00000491607 ZNF705BP0CI00 300 aaPredicted RBP13.19□□□□□ -0.3
SMIM4-205ENST00000491607 SPART-AS1P0CW21 52 aa13.19□□□□□ -0.3
SMIM4-205ENST00000491607 GALR1P47211 349 aa13.19□□□□□ -0.3
SMIM4-205ENST00000491607 AKR1C1Q04828 323 aa13.19□□□□□ -0.3
SMIM4-205ENST00000491607 FAM78BQ5VT40 261 aa13.19□□□□□ -0.3
SMIM4-205ENST00000491607 SAMD13Q5VXD3 122 aa13.19□□□□□ -0.3
SMIM4-205ENST00000491607 SPATA31B1PQ5VZV4 182 aa13.19□□□□□ -0.3
SMIM4-205ENST00000491607 ZNF709Q8N972 641 aa13.19□□□□□ -0.3
SMIM4-205ENST00000491607 SCRT1Q9BWW7 348 aa13.19□□□□□ -0.3
SMIM4-205ENST00000491607 TMEM189A5PLL7 270 aa13.18□□□□□ -0.3
SMIM4-205ENST00000491607 SMIM9A6NGZ8 99 aa13.18□□□□□ -0.3
SMIM4-205ENST00000491607 PRSS46E5RG02 174 aa13.18□□□□□ -0.3
SMIM4-205ENST00000491607 ORM2P19652 201 aa13.18□□□□□ -0.3
SMIM4-205ENST00000491607 GATA2P23769 480 aaPredicted RBP13.18□□□□□ -0.3
SMIM4-205ENST00000491607 INPP1P49441 399 aa13.18□□□□□ -0.3
SMIM4-205ENST00000491607 MEOX2P50222 304 aa13.18□□□□□ -0.3
SMIM4-205ENST00000491607 PSG9Q00887 426 aa13.18□□□□□ -0.3
SMIM4-205ENST00000491607 CCDC190Q86UF4 302 aa13.18□□□□□ -0.3
SMIM4-205ENST00000491607 BPIFCQ8NFQ6 507 aa13.18□□□□□ -0.3
SMIM4-205ENST00000491607 NDUFAF3Q9BU61 184 aa13.18□□□□□ -0.3
SMIM4-205ENST00000491607 SLC25A32Q9H2D1 315 aa13.18□□□□□ -0.3
SMIM4-205ENST00000491607 RPRMQ9NS64 109 aa13.18□□□□□ -0.3
SMIM4-205ENST00000491607 STRAPQ9Y3F4 350 aaKnown RBP13.18□□□□□ -0.3
SMIM4-205ENST00000491607 RFNGQ9Y644 331 aa13.18□□□□□ -0.3
SMIM4-205ENST00000491607 SPANXN2Q5MJ10 180 aa13.17□□□□□ -0.3
SMIM4-205ENST00000491607 OR1B1Q8NGR6 318 aa13.17□□□□□ -0.3
SMIM4-205ENST00000491607 CLUHP3Q96NS8 147 aa13.17□□□□□ -0.3
SMIM4-205ENST00000491607 C7orf50Q9BRJ6 194 aaKnown RBP13.17□□□□□ -0.3
SMIM4-205ENST00000491607 RSG1Q9BU20 258 aa13.17□□□□□ -0.3
SMIM4-205ENST00000491607 TMEM147Q9BVK8 224 aa13.17□□□□□ -0.3
SMIM4-205ENST00000491607 GOLT1BQ9Y3E0 138 aa13.17□□□□□ -0.3
SMIM4-205ENST00000491607 A0A0J9YX75 114 aa13.16□□□□□ -0.3
SMIM4-205ENST00000491607 SMCO3A2RU48 225 aa13.16□□□□□ -0.3
SMIM4-205ENST00000491607 ZNF98A6NK75 572 aa13.16□□□□□ -0.3
SMIM4-205ENST00000491607 ADAP1O75689 374 aa13.16□□□□□ -0.3
SMIM4-205ENST00000491607 PAX9P55771 341 aa13.16□□□□□ -0.3
SMIM4-205ENST00000491607 TMEM182Q6ZP80 229 aaPredicted RBP13.16□□□□□ -0.3
SMIM4-205ENST00000491607 ACOT7LQ6ZUV0 252 aa13.16□□□□□ -0.3
SMIM4-205ENST00000491607 C20orf173Q96LM9 149 aa13.16□□□□□ -0.3
SMIM4-205ENST00000491607 SLC45A2Q9UMX9 530 aa13.16□□□□□ -0.3
SMIM4-205ENST00000491607 C9orf170A2RU37 121 aa13.15□□□□□ -0.3
SMIM4-205ENST00000491607 P0DMU3 169 aa13.15□□□□□ -0.3
SMIM4-205ENST00000491607 FAM231AP0DMU4 169 aa13.15□□□□□ -0.3
SMIM4-205ENST00000491607 FAM231CP0DMU5 169 aa13.15□□□□□ -0.3
SMIM4-205ENST00000491607 UBE2MP61081 183 aaKnown RBP13.15□□□□□ -0.3
SMIM4-205ENST00000491607 DOK5Q9P104 306 aa13.15□□□□□ -0.3
SMIM4-205ENST00000491607 HBE1P02100 147 aa13.14□□□□□ -0.31
SMIM4-205ENST00000491607 S100A7P31151 101 aa13.14□□□□□ -0.31
SMIM4-205ENST00000491607 POLR2GP62487 172 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMIM4-205ENST00000491607 FGL1Q08830 312 aa13.14□□□□□ -0.31
SMIM4-205ENST00000491607 FAM222AQ5U5X8 452 aa13.14□□□□□ -0.31
SMIM4-205ENST00000491607 TRIQKQ629K1 86 aa13.14□□□□□ -0.31
SMIM4-205ENST00000491607 GPR82Q96P67 336 aa13.14□□□□□ -0.31
SMIM4-205ENST00000491607 SRRQ9GZT4 340 aa13.14□□□□□ -0.31
SMIM4-205ENST00000491607 PSENENQ9NZ42 101 aa13.14□□□□□ -0.31
SMIM4-205ENST00000491607 DKK2Q9UBU2 259 aa13.14□□□□□ -0.31
SMIM4-205ENST00000491607 HECTD4Q9Y4D8 3996 aa13.13□□□□□ -0.31
SMIM4-205ENST00000491607 TEX48A0A1B0GUV7 120 aa13.13□□□□□ -0.31
SMIM4-205ENST00000491607 LOC102723971A0A1B0GUV8 181 aa13.13□□□□□ -0.31
SMIM4-205ENST00000491607 LINC00854A0A1B0GVQ3 168 aa13.13□□□□□ -0.31
SMIM4-205ENST00000491607 SSSCA1O60232 199 aa13.13□□□□□ -0.31
SMIM4-205ENST00000491607 ID3Q02535 119 aa13.13□□□□□ -0.31
SMIM4-205ENST00000491607 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.13□□□□□ -0.31
SMIM4-205ENST00000491607 C1orf158Q8N1D5 194 aa13.13□□□□□ -0.31
SMIM4-205ENST00000491607 POM121L12Q8N7R1 296 aa13.13□□□□□ -0.31
SMIM4-205ENST00000491607 OR4D5Q8NGN0 318 aa13.13□□□□□ -0.31
SMIM4-205ENST00000491607 NIPSNAP3BQ9BS92 247 aa13.13□□□□□ -0.31
SMIM4-205ENST00000491607 TMEM208Q9BTX3 173 aa13.13□□□□□ -0.31
SMIM4-205ENST00000491607 DNAH6Q9C0G6 4158 aa13.12□□□□□ -0.31
SMIM4-205ENST00000491607 NAP1L6A6NFF2 107 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms