RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 K7EQG2 157 aa12.1□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 ORM2P19652 201 aa12.1□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 S100A11P31949 105 aa12.1□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 HAGHQ16775 308 aa12.1□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 C1orf194Q5T5A4 169 aa12.1□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 SIGLEC15Q6ZMC9 328 aa12.1□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 STPG3Q8N7X2 389 aa12.1□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 OR1B1Q8NGR6 318 aa12.1□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 TM2D3Q9BRN9 247 aa12.1□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 TMEM147Q9BVK8 224 aa12.1□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 SLC25A31Q9H0C2 315 aa12.1□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 ZMAT4Q9H898 229 aa12.1□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 MAP6D1Q9H9H5 199 aa12.1□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 UQCC1Q9NVA1 299 aa12.1□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 TGP01266 2768 aa12.09□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 LOC102724200A0A096LPH7 203 aaPredicted RBP12.09□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 LINC00869P0C866 280 aa12.09□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 S100A7P31151 101 aa12.09□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 VWC2Q2TAL6 325 aa12.09□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 ZNF546Q86UE3 836 aa12.09□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 APRG1Q8IVJ8 170 aa12.09□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 FAM24BQ8N5W8 94 aa12.09□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 DCANP1Q8TF63 244 aa12.09□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 GGTLC1Q9BX51 225 aa12.09□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 MED28Q9H204 178 aa12.09□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 DOK5Q9P104 306 aa12.09□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 FBXL17Q9UF56 701 aa12.09□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 U3KQK5 164 aa12.09□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 UBE2L5PA0A1B0GUS4 154 aa12.08□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 AGPAT2O15120 278 aa12.08□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 MPC2O95563 127 aa12.08□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 CXCL3P19876 107 aa12.08□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 PLP1P60201 277 aa12.08□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 EWSR1Q01844 656 aaKnown RBP eCLIP12.08□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 RAB31Q13636 194 aa12.08□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 OXA1LQ15070 435 aa12.08□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 ATP6V1FQ16864 119 aa12.08□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 MGST2Q99735 147 aa12.08□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 NRN1Q9NPD7 142 aa12.08□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 WDR83OSQ9Y284 106 aa12.08□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 HYPMO75409 117 aa12.07□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 DEFB131AP59861 70 aa12.07□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 RAP2BP61225 183 aa12.07□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 BAXQ07812 192 aa12.07□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 FCN2Q15485 313 aa12.07□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 OR8I2Q8N0Y5 310 aa12.07□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 SPATA25Q9BR10 227 aa12.07□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 RNF126Q9BV68 326 aa12.07□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 HIGD1AQ9Y241 93 aa12.07□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 ZNF98A6NK75 572 aa12.06□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 H3BRN7 92 aa12.06□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 OR5G3P0C626 314 aa12.06□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 ZNF688P0C7X2 276 aa12.06□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 CAMLGP49069 296 aa12.06□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 NHLH2Q02577 135 aa12.06□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 ZNF124Q15973 351 aa12.06□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 PXDC1Q5TGL8 231 aa12.06□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 OR11H7Q8NGC8 314 aa12.06□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 RCHY1Q96PM5 261 aa12.06□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 SLC25A39Q9BZJ4 359 aaPredicted RBP12.06□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 ARL6Q9H0F7 186 aa12.06□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 SLC25A32Q9H2D1 315 aa12.06□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 SLC25A22Q9H936 323 aa12.06□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 MBD2Q9UBB5 411 aa12.06□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 LEMD1Q68G75 181 aa12.05□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 S100A7AQ86SG5 101 aa12.05□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 OR5C1Q8NGR4 320 aa12.05□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 SHANK2-AS3Q9BTD1 123 aa12.05□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 SCRT1Q9BWW7 348 aa12.05□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 FGF7P21781 194 aa12.04□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 GALR1P47211 349 aa12.04□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 APOC4P55056 127 aa12.04□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 SNRPD3P62318 126 aaKnown RBP12.04□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 GPR82Q96P67 336 aa12.04□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 ARV1Q9H2C2 271 aa12.04□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 SEPSECSQ9HD40 501 aaKnown RBP12.04□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 LYL1P12980 280 aa12.03□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 RPL35AP18077 110 aaKnown RBP12.03□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 CLINT1Q14677 625 aa12.03□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 OPCMLQ14982 345 aa12.03□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 PSMG4Q5JS54 123 aa12.03□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 MIC13Q5XKP0 118 aa12.03□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 PATE2Q6UY27 113 aa12.03□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 THAP6Q8TBB0 222 aa12.03□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 UHRF2Q96PU4 802 aa12.03□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 RETNQ9HD89 108 aa12.03□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 HSPB11Q9Y547 144 aa12.03□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 COL7A1Q02388 2944 aa12.02□□□□□ -0.48
MSH5-SAPCD1-206ENST00000491552 KIR2DL5BA0A0G2JN68 375 aa12.02□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 KIR2DL5BA0A0G2JPC4 375 aa12.02□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 COX7A2P2O60397 106 aa12.02□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 MPDU1O75352 247 aa12.02□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 GIPP09681 153 aaPredicted RBP12.02□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 RPL12P30050 165 aaKnown RBP12.02□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 RPL29P47914 159 aaKnown RBP12.02□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 PRR20EP86478 221 aa12.02□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 PRR20CP86479 221 aa12.02□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 PRR20DP86480 221 aa12.02□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 PRR20BP86481 221 aa12.02□□□□□ -0.49
MSH5-SAPCD1-206ENST00000491552 PRR20AP86496 221 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms