RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 HYLS1Q96M11 299 aa8.02□□□□□ -1.13
CLCNKA-206ENST00000491433 VSIRQ9H7M9 311 aa8.02□□□□□ -1.13
CLCNKA-206ENST00000491433 FKBP11Q9NYL4 201 aa8.02□□□□□ -1.13
CLCNKA-206ENST00000491433 X6R8D5 127 aa8.02□□□□□ -1.13
CLCNKA-206ENST00000491433 DNAH17Q9UFH2 4485 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 IGLV2-18A0A075B6J9 118 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 IGHV3-49A0A0A0MS15 119 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 TRAV3A0A0B4J244 114 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 KRTAP9-6A0A140TA67 174 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 TEX48A0A1B0GUV7 120 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 A0A1W2PS18 150 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 SMLR1H3BR10 107 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 BOLA2-SMG1P6H3BVE0 249 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 GNG7O60262 68 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 SNAPC5O75971 98 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 MBPP02686 304 aaPredicted RBP8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 FAM3BP58499 235 aaPredicted RBP8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 NUTF2P61970 127 aaKnown RBP8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 RAB32Q13637 225 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 OR1P1Q8NH06 330 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 OR52E5Q8NH55 327 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 ZNF414Q96IQ9 312 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 HINT2Q9BX68 163 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 NDUFA4L2Q9NRX3 87 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 HSPB7Q9UBY9 170 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 RABAC1Q9UI14 185 aa8.01□□□□□ -1.13
CLCNKA-206ENST00000491433 TMEM189A5PLL7 270 aa8□□□□□ -1.13
CLCNKA-206ENST00000491433 K7EPK0 472 aa8□□□□□ -1.13
CLCNKA-206ENST00000491433 GIG44P09565 113 aaPredicted RBP8□□□□□ -1.13
CLCNKA-206ENST00000491433 PAX9P55771 341 aa8□□□□□ -1.13
CLCNKA-206ENST00000491433 IZUMO4Q1ZYL8 232 aa8□□□□□ -1.13
CLCNKA-206ENST00000491433 ZFP69Q49AA0 526 aa8□□□□□ -1.13
CLCNKA-206ENST00000491433 PRSS54Q6PEW0 395 aa8□□□□□ -1.13
CLCNKA-206ENST00000491433 H2BFWTQ7Z2G1 175 aa8□□□□□ -1.13
CLCNKA-206ENST00000491433 ST8SIA2Q92186 375 aa8□□□□□ -1.13
CLCNKA-206ENST00000491433 RRNAD1Q96FB5 475 aaKnown RBP8□□□□□ -1.13
CLCNKA-206ENST00000491433 CACNG5Q9UF02 275 aa8□□□□□ -1.13
CLCNKA-206ENST00000491433 TNFSF18Q9UNG2 199 aa8□□□□□ -1.13
CLCNKA-206ENST00000491433 CELA1Q9UNI1 258 aa8□□□□□ -1.13
CLCNKA-206ENST00000491433 RCL1Q9Y2P8 373 aaKnown RBP8□□□□□ -1.13
CLCNKA-206ENST00000491433 HMCN2Q8NDA2 5059 aa8□□□□□ -1.13
CLCNKA-206ENST00000491433 IGHV3OR16-13A0A075B7E8 117 aa7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 IGHV3-74A0A0B4J1X5 117 aa7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 FAM25EA8MYX2 175 aa7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 INS-IGF2F8WCM5 200 aa7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 HNRNPCP07910 306 aaKnown RBP eCLIP7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 SPART-AS1P0CW21 52 aa7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 NKX2-1P43699 371 aaPredicted RBP7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 EIF2B2P49770 351 aaKnown RBP7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 AKR1C2P52895 323 aa7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 LGALSLQ3ZCW2 172 aaPredicted RBP7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 C9orf62Q8N4C0 152 aa7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 OR1S1Q8NH92 325 aa7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 NARS2Q96I59 477 aaKnown RBP7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 PDCD10Q9BUL8 212 aa7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 CACFD1Q9UGQ2 172 aa7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 PRNDQ9UKY0 176 aa7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 OR51B2Q9Y5P1 312 aa7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 AGRNO00468 2067 aa7.99□□□□□ -1.13
CLCNKA-206ENST00000491433 FLG2Q5D862 2391 aaPredicted RBP7.98□□□□□ -1.13
CLCNKA-206ENST00000491433 RNF222A6NCQ9 220 aa7.98□□□□□ -1.13
CLCNKA-206ENST00000491433 SCGB2A1O75556 95 aa7.98□□□□□ -1.13
CLCNKA-206ENST00000491433 TMEM50AO95807 157 aa7.98□□□□□ -1.13
CLCNKA-206ENST00000491433 C4BPBP20851 252 aa7.98□□□□□ -1.13
CLCNKA-206ENST00000491433 NPPCP23582 126 aa7.98□□□□□ -1.13
CLCNKA-206ENST00000491433 NPBWR1P48145 328 aa7.98□□□□□ -1.13
CLCNKA-206ENST00000491433 TAS2R30P59541 319 aa7.98□□□□□ -1.13
CLCNKA-206ENST00000491433 ZNF767PQ75MW2 155 aa7.98□□□□□ -1.13
CLCNKA-206ENST00000491433 CSNK1G2-AS1Q8NCQ2 148 aa7.98□□□□□ -1.13
CLCNKA-206ENST00000491433 MISP3Q96FF7 219 aa7.98□□□□□ -1.13
CLCNKA-206ENST00000491433 SMIM8Q96KF7 97 aa7.98□□□□□ -1.13
CLCNKA-206ENST00000491433 OR5AC2Q9NZP5 309 aa7.98□□□□□ -1.13
CLCNKA-206ENST00000491433 GSKIPQ9P0R6 139 aa7.98□□□□□ -1.13
CLCNKA-206ENST00000491433 SMIM9A6NGZ8 99 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 E5RGE8 158 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 I3L2K1 104 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 K7EQG2 157 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 SYNGR2O43760 224 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 CXCL2P19875 107 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 P2RY1P47900 373 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 SPCS3P61009 180 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 HSPE1P61604 102 aaKnown RBP7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 POLR2GP62487 172 aaKnown RBP eCLIP7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 ZNF345Q14585 488 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 ACTL10Q5JWF8 245 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 TOMM20LQ6UXN7 152 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 ZNF600Q6ZNG1 722 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 STXBP6Q8NFX7 210 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 THAP6Q8TBB0 222 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 AQP10Q96PS8 301 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 RAB40CQ96S21 281 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 NEU1Q99519 415 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 CLEC5AQ9NY25 188 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 MBD2Q9UBB5 411 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 NSG2Q9Y328 171 aa7.97□□□□□ -1.13
CLCNKA-206ENST00000491433 MT-CO2P00403 227 aa7.96□□□□□ -1.14
CLCNKA-206ENST00000491433 RLN2P04090 185 aa7.96□□□□□ -1.14
CLCNKA-206ENST00000491433 PET100P0DJ07 73 aa7.96□□□□□ -1.14
CLCNKA-206ENST00000491433 AP2S1P53680 142 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms