RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 UHRF2Q96PU4 802 aa16.63■□□□□ 0.25
VCPKMT-204ENST00000491402 PFDN5Q99471 154 aa16.63■□□□□ 0.25
VCPKMT-204ENST00000491402 DNAJC4Q9NNZ3 241 aa16.63■□□□□ 0.25
VCPKMT-204ENST00000491402 VWFP04275 2813 aa16.63■□□□□ 0.25
VCPKMT-204ENST00000491402 IFNA7P01567 189 aa16.62■□□□□ 0.25
VCPKMT-204ENST00000491402 SULT1A2P50226 295 aa16.62■□□□□ 0.25
VCPKMT-204ENST00000491402 SYNJ2BPP57105 145 aa16.62■□□□□ 0.25
VCPKMT-204ENST00000491402 RPP25LQ8N5L8 163 aaKnown RBP16.62■□□□□ 0.25
VCPKMT-204ENST00000491402 OR10G4Q8NGN3 311 aa16.62■□□□□ 0.25
VCPKMT-204ENST00000491402 OR10G9Q8NGN4 311 aa16.62■□□□□ 0.25
VCPKMT-204ENST00000491402 OR10G7Q8NGN6 311 aa16.62■□□□□ 0.25
VCPKMT-204ENST00000491402 GATAD1Q8WUU5 269 aa16.62■□□□□ 0.25
VCPKMT-204ENST00000491402 MRPL27Q9P0M9 148 aaKnown RBP16.62■□□□□ 0.25
VCPKMT-204ENST00000491402 FHITP49789 147 aa16.61■□□□□ 0.25
VCPKMT-204ENST00000491402 KLF5Q13887 457 aaPredicted RBP16.61■□□□□ 0.25
VCPKMT-204ENST00000491402 C10orf113Q5VZT2 155 aa16.61■□□□□ 0.25
VCPKMT-204ENST00000491402 SEPSECSQ9HD40 501 aaKnown RBP16.61■□□□□ 0.25
VCPKMT-204ENST00000491402 HIGD1AQ9Y241 93 aa16.61■□□□□ 0.25
VCPKMT-204ENST00000491402 C1QL4Q86Z23 238 aa16.61■□□□□ 0.25
VCPKMT-204ENST00000491402 RABAC1Q9UI14 185 aa16.61■□□□□ 0.25
VCPKMT-204ENST00000491402 DNHD1Q96M86 4753 aa16.6■□□□□ 0.25
VCPKMT-204ENST00000491402 LGALS9O00182 355 aa16.6■□□□□ 0.25
VCPKMT-204ENST00000491402 ZNF207O43670 478 aaKnown RBP16.6■□□□□ 0.25
VCPKMT-204ENST00000491402 RAB5CP51148 216 aa16.6■□□□□ 0.25
VCPKMT-204ENST00000491402 FAM78BQ5VT40 261 aa16.6■□□□□ 0.25
VCPKMT-204ENST00000491402 LINC00305Q7Z4B0 112 aa16.6■□□□□ 0.25
VCPKMT-204ENST00000491402 REC114Q7Z4M0 266 aa16.6■□□□□ 0.25
VCPKMT-204ENST00000491402 METTL26Q96S19 204 aa16.6■□□□□ 0.25
VCPKMT-204ENST00000491402 DAZ1Q9NQZ3 744 aaKnown RBP16.6■□□□□ 0.25
VCPKMT-204ENST00000491402 UBQLN2Q9UHD9 624 aa16.6■□□□□ 0.25
VCPKMT-204ENST00000491402 RNF141Q8WVD5 230 aa16.59■□□□□ 0.25
VCPKMT-204ENST00000491402 DLX4Q92988 240 aaPredicted RBP16.59■□□□□ 0.25
VCPKMT-204ENST00000491402 A8MWP6 167 aa16.59■□□□□ 0.25
VCPKMT-204ENST00000491402 RHOBP62745 196 aa16.59■□□□□ 0.25
VCPKMT-204ENST00000491402 MORN5Q5VZ52 161 aa16.59■□□□□ 0.25
VCPKMT-204ENST00000491402 FAM122CQ6P4D5 195 aa16.59■□□□□ 0.25
VCPKMT-204ENST00000491402 SLC25A39Q9BZJ4 359 aaPredicted RBP16.59■□□□□ 0.25
VCPKMT-204ENST00000491402 SLC25A22Q9H936 323 aa16.59■□□□□ 0.25
VCPKMT-204ENST00000491402 TRRAPQ9Y4A5 3859 aa16.58■□□□□ 0.25
VCPKMT-204ENST00000491402 A0A1W2PPV4 95 aa16.58■□□□□ 0.24
VCPKMT-204ENST00000491402 SEC14L6B5MCN3 397 aa16.58■□□□□ 0.24
VCPKMT-204ENST00000491402 CRYBB3P26998 211 aa16.58■□□□□ 0.24
VCPKMT-204ENST00000491402 MYCNOSP40205 109 aa16.58■□□□□ 0.24
VCPKMT-204ENST00000491402 TM4SF20Q53R12 229 aa16.58■□□□□ 0.24
VCPKMT-204ENST00000491402 SPATA31B1PQ5VZV4 182 aa16.58■□□□□ 0.24
VCPKMT-204ENST00000491402 DPPA3Q6W0C5 159 aa16.58■□□□□ 0.24
VCPKMT-204ENST00000491402 FAM213BQ8TBF2 198 aa16.58■□□□□ 0.24
VCPKMT-204ENST00000491402 RNF2Q99496 336 aa16.58■□□□□ 0.24
VCPKMT-204ENST00000491402 UFC1Q9Y3C8 167 aa16.58■□□□□ 0.24
VCPKMT-204ENST00000491402 NPPCP23582 126 aa16.57■□□□□ 0.24
VCPKMT-204ENST00000491402 CDC34P49427 236 aaPredicted RBP16.57■□□□□ 0.24
VCPKMT-204ENST00000491402 ZNF726P1Q15940 193 aa16.57■□□□□ 0.24
VCPKMT-204ENST00000491402 OR4F17Q8NGA8 305 aa16.57■□□□□ 0.24
VCPKMT-204ENST00000491402 OR4F4Q96R69 305 aa16.57■□□□□ 0.24
VCPKMT-204ENST00000491402 ACTR3CQ9C0K3 210 aaPredicted RBP16.57■□□□□ 0.24
VCPKMT-204ENST00000491402 FUT9Q9Y231 359 aa16.57■□□□□ 0.24
VCPKMT-204ENST00000491402 TMEM213A2RRL7 107 aa16.56■□□□□ 0.24
VCPKMT-204ENST00000491402 H3BRN7 92 aa16.56■□□□□ 0.24
VCPKMT-204ENST00000491402 K7EMT4 169 aa16.56■□□□□ 0.24
VCPKMT-204ENST00000491402 EIF3GO75821 320 aaKnown RBP eCLIP16.56■□□□□ 0.24
VCPKMT-204ENST00000491402 ZNF767PQ75MW2 155 aa16.56■□□□□ 0.24
VCPKMT-204ENST00000491402 MIR17HGQ75NE6 70 aa16.56■□□□□ 0.24
VCPKMT-204ENST00000491402 SSX7Q7RTT5 188 aa16.56■□□□□ 0.24
VCPKMT-204ENST00000491402 SHANK2-AS3Q9BTD1 123 aa16.56■□□□□ 0.24
VCPKMT-204ENST00000491402 SCRT1Q9BWW7 348 aa16.56■□□□□ 0.24
VCPKMT-204ENST00000491402 MRPL32Q9BYC8 188 aaKnown RBP16.56■□□□□ 0.24
VCPKMT-204ENST00000491402 PKD1L1Q8TDX9 2849 aa16.56■□□□□ 0.24
VCPKMT-204ENST00000491402 ZNF705EA8MWA4 302 aaPredicted RBP16.56■□□□□ 0.24
VCPKMT-204ENST00000491402 LEMD1Q68G75 181 aa16.56■□□□□ 0.24
VCPKMT-204ENST00000491402 S100A7AQ86SG5 101 aa16.56■□□□□ 0.24
VCPKMT-204ENST00000491402 OR9G4Q8NGQ1 327 aa16.56■□□□□ 0.24
VCPKMT-204ENST00000491402 RAB24Q969Q5 203 aa16.56■□□□□ 0.24
VCPKMT-204ENST00000491402 IGHV3-49A0A0A0MS15 119 aa16.55■□□□□ 0.24
VCPKMT-204ENST00000491402 ZNF98A6NK75 572 aa16.55■□□□□ 0.24
VCPKMT-204ENST00000491402 M0QZ24 198 aa16.55■□□□□ 0.24
VCPKMT-204ENST00000491402 HMGB3O15347 200 aaKnown RBP16.55■□□□□ 0.24
VCPKMT-204ENST00000491402 APOHP02749 345 aaPredicted RBP16.55■□□□□ 0.24
VCPKMT-204ENST00000491402 PF4P02776 101 aa16.55■□□□□ 0.24
VCPKMT-204ENST00000491402 EDN2P20800 178 aa16.55■□□□□ 0.24
VCPKMT-204ENST00000491402 CTXND1A0A1B0GTU2 59 aa16.54■□□□□ 0.24
VCPKMT-204ENST00000491402 PEMTQ9UBM1 199 aa16.54■□□□□ 0.24
VCPKMT-204ENST00000491402 U3KQE9 123 aa16.54■□□□□ 0.24
VCPKMT-204ENST00000491402 IGHV3OR16-13A0A075B7E8 117 aa16.54■□□□□ 0.24
VCPKMT-204ENST00000491402 IGHV3-74A0A0B4J1X5 117 aa16.54■□□□□ 0.24
VCPKMT-204ENST00000491402 TRAV5A0A0B4J249 113 aa16.54■□□□□ 0.24
VCPKMT-204ENST00000491402 IGHV7-4-1A0A0J9YVY3 117 aa16.54■□□□□ 0.24
VCPKMT-204ENST00000491402 BUB3O43684 328 aa16.54■□□□□ 0.24
VCPKMT-204ENST00000491402 S100A7P31151 101 aa16.54■□□□□ 0.24
VCPKMT-204ENST00000491402 PFDN2Q9UHV9 154 aa16.54■□□□□ 0.24
VCPKMT-204ENST00000491402 IGHV3-66A0A0C4DH42 116 aa16.53■□□□□ 0.24
VCPKMT-204ENST00000491402 C2orf70A6NJV1 201 aa16.53■□□□□ 0.24
VCPKMT-204ENST00000491402 OVOL1O14753 267 aa16.53■□□□□ 0.24
VCPKMT-204ENST00000491402 RGS13O14921 159 aa16.53■□□□□ 0.24
VCPKMT-204ENST00000491402 LRRC20Q8TCA0 184 aa16.53■□□□□ 0.24
VCPKMT-204ENST00000491402 NARS2Q96I59 477 aaKnown RBP16.53■□□□□ 0.24
VCPKMT-204ENST00000491402 C8orf88P0DMB2 117 aa16.52■□□□□ 0.24
VCPKMT-204ENST00000491402 SAT2Q96F10 170 aaPredicted RBP16.52■□□□□ 0.24
VCPKMT-204ENST00000491402 FAM167A-AS1Q96KT0 104 aa16.52■□□□□ 0.24
VCPKMT-204ENST00000491402 SLC25A2Q9BXI2 301 aa16.52■□□□□ 0.24
VCPKMT-204ENST00000491402 TECRQ9NZ01 308 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms