RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 C2orf91Q6ZV80 131 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 PHF5AQ7RTV0 110 aaKnown RBP2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 SIGLECL1Q8N7X8 197 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 OR5D16Q8NGK9 328 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 C14orf144Q96I85 54 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 TAF9BQ9HBM6 251 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 ASF1BQ9NVP2 202 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 FAM135AQ9P2D6 1515 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 TNS3Q68CZ2 1445 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 REREQ9P2R6 1566 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 HIVEP2P31629 2446 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 RIMS1Q86UR5 1692 aaKnown RBP2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 IGKV1D-37A0A075B6S9 117 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 MDFIC2A0A1B0GVS7 189 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 A0A1W2PQD3 144 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 C20orf202A1L168 122 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 GGTLC3B5MD39 225 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 LY6LH3BQJ8 138 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 TP53I11O14683 189 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 NPFFO15130 113 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 NCR2O95944 276 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 TCL1BO95988 128 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 IFNA4P05014 189 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 S100A8P05109 93 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 MSMBP08118 114 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 LINC00694P0DN24 101 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 CCL5P13501 91 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 HLA-EP13747 358 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 RNASE4P34096 147 aaKnown RBP2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 GUCA1AP43080 201 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 XCL1P47992 114 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 MAXP61244 160 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 KISS1Q15726 138 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 HSD17B12Q53GQ0 312 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 DPPA3Q6W0C5 159 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 MUC7Q8TAX7 377 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 ZNF418Q8TF45 676 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 PPP3R2Q96LZ3 170 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 IMMP2LQ96T52 175 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 BANF2Q9H503 90 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 COA4Q9NYJ1 87 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 EPDR1Q9UM22 224 aa2.39□□□□□ -2.03
HMGB1P38-201ENST00000490557 IGHV3-15A0A0B4J1V0 119 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 TRBV27A0A0K0K1C4 114 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 C3orf84H3BNL1 204 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 H3BT86 120 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 K7ERJ3 54 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 DSCAMO60469 2012 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 MT-ND6P03923 174 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 GZMBP10144 247 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 NFYAP23511 347 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 CD24P25063 80 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 AQP4P55087 323 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 ZNF117Q03924 483 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 FAM229BQ4G0N7 80 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 KHDC3LQ587J8 217 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 C3orf62Q6ZUJ4 267 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 FGD6Q6ZV73 1430 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 TCTEX1D1Q8N7M0 179 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 OR4E2Q8NGC2 313 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 OR5A2Q8NGI9 324 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 OR5H6Q8NGV6 325 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 NUP205Q92621 2012 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 FGF13Q92913 245 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 PRELID3AQ96N28 172 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 C16orf95Q9H693 158 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 CNTLNQ9NXG0 1405 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 SOX21Q9Y651 276 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 UHRF1BP1LA0JNW5 1464 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 DSPPQ9NZW4 1301 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 ATAD5Q96QE3 1844 aa2.38□□□□□ -2.03
HMGB1P38-201ENST00000490557 ZNF106Q9H2Y7 1883 aaKnown RBP2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 ADAMTSL1Q8N6G6 1762 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 A0A0D9SG52 128 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 C7orf71A4D174 169 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 TMEM235A6NFC5 223 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 OR2T8A6NH00 312 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 BBIP1A8MTZ0 92 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 C17orf98A8MV24 154 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 A8MWV9 139 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 C16orf90A8MZG2 172 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 H3BPC8 53 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 CORTO00230 105 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 RER1O15258 196 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 CRYGSP22914 178 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 RPL28P46779 137 aaKnown RBP2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 SOSTDC1Q6X4U4 206 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 OR10P1Q8NGE3 313 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 NAT14Q8WUY8 206 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 TVP23CQ96ET8 276 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 TXNL4BQ9NX01 149 aaKnown RBP2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 ZNF443Q9Y2A4 671 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 TIMM9Q9Y5J7 89 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 SCRIBQ14160 1630 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 NCAPD3P42695 1498 aa2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 XIRP1Q702N8 1843 aaKnown RBP2.37□□□□□ -2.03
HMGB1P38-201ENST00000490557 EIF4G3O43432 1585 aaKnown RBP2.36□□□□□ -2.03
HMGB1P38-201ENST00000490557 PRG4Q92954 1404 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P38-201ENST00000490557 KIAA1671Q9BY89 1806 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms