RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 BLOC1S1P78537 153 aa7.72□□□□□ -1.17
TTC28-207ENST00000490475 S100A12P80511 92 aa7.72□□□□□ -1.17
TTC28-207ENST00000490475 STPG3Q8N7X2 389 aa7.72□□□□□ -1.17
TTC28-207ENST00000490475 SLC24A4Q8NFF2 622 aa7.72□□□□□ -1.17
TTC28-207ENST00000490475 BPIFCQ8NFQ6 507 aa7.72□□□□□ -1.17
TTC28-207ENST00000490475 PCNPQ8WW12 178 aaKnown RBP7.72□□□□□ -1.17
TTC28-207ENST00000490475 OR10C1Q96KK4 312 aa7.72□□□□□ -1.17
TTC28-207ENST00000490475 C2orf50Q96LR7 162 aa7.72□□□□□ -1.17
TTC28-207ENST00000490475 OVOL2Q9BRP0 275 aa7.72□□□□□ -1.17
TTC28-207ENST00000490475 C5orf51A6NDU8 294 aa7.71□□□□□ -1.18
TTC28-207ENST00000490475 CORTO00230 105 aa7.71□□□□□ -1.18
TTC28-207ENST00000490475 SPRY2O43597 315 aa7.71□□□□□ -1.18
TTC28-207ENST00000490475 IFNA21P01568 189 aa7.71□□□□□ -1.18
TTC28-207ENST00000490475 S100A6P06703 90 aa7.71□□□□□ -1.18
TTC28-207ENST00000490475 NPY1RP25929 384 aa7.71□□□□□ -1.18
TTC28-207ENST00000490475 PAFAH1B2P68402 229 aa7.71□□□□□ -1.18
TTC28-207ENST00000490475 IL15RAQ13261 267 aa7.71□□□□□ -1.18
TTC28-207ENST00000490475 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.71□□□□□ -1.18
TTC28-207ENST00000490475 SMIM8Q96KF7 97 aa7.71□□□□□ -1.18
TTC28-207ENST00000490475 LYSTQ99698 3801 aa7.71□□□□□ -1.18
TTC28-207ENST00000490475 C20orf24Q9BUV8 137 aa7.71□□□□□ -1.18
TTC28-207ENST00000490475 KLK5Q9Y337 293 aaPredicted RBP7.71□□□□□ -1.18
TTC28-207ENST00000490475 CXorf65A6NEN9 183 aa7.7□□□□□ -1.18
TTC28-207ENST00000490475 FAM90A26D6RGX4 464 aa7.7□□□□□ -1.18
TTC28-207ENST00000490475 WRBO00258 174 aa7.7□□□□□ -1.18
TTC28-207ENST00000490475 CCSO14618 274 aa7.7□□□□□ -1.18
TTC28-207ENST00000490475 SYNGR2O43760 224 aa7.7□□□□□ -1.18
TTC28-207ENST00000490475 CLN5O75503 358 aa7.7□□□□□ -1.18
TTC28-207ENST00000490475 SCGB2A1O75556 95 aa7.7□□□□□ -1.18
TTC28-207ENST00000490475 IFNA4P05014 189 aa7.7□□□□□ -1.18
TTC28-207ENST00000490475 POLR2GP62487 172 aaKnown RBP eCLIP7.7□□□□□ -1.18
TTC28-207ENST00000490475 ID3Q02535 119 aa7.7□□□□□ -1.18
TTC28-207ENST00000490475 IAH1Q2TAA2 248 aaPredicted RBP7.7□□□□□ -1.18
TTC28-207ENST00000490475 OR4D5Q8NGN0 318 aa7.7□□□□□ -1.18
TTC28-207ENST00000490475 OR4X1Q8NH49 305 aa7.7□□□□□ -1.18
TTC28-207ENST00000490475 RNASEH2CQ8TDP1 164 aaKnown RBP7.7□□□□□ -1.18
TTC28-207ENST00000490475 GINS3Q9BRX5 216 aa7.7□□□□□ -1.18
TTC28-207ENST00000490475 RNF126Q9BV68 326 aa7.7□□□□□ -1.18
TTC28-207ENST00000490475 SMDT1Q9H4I9 107 aa7.7□□□□□ -1.18
TTC28-207ENST00000490475 GSKIPQ9P0R6 139 aa7.7□□□□□ -1.18
TTC28-207ENST00000490475 RYR2Q92736 4967 aa7.7□□□□□ -1.18
TTC28-207ENST00000490475 DYNC2H1Q8NCM8 4307 aaKnown RBP7.69□□□□□ -1.18
TTC28-207ENST00000490475 IGHV3-49A0A0A0MS15 119 aa7.69□□□□□ -1.18
TTC28-207ENST00000490475 MED6O75586 246 aa7.69□□□□□ -1.18
TTC28-207ENST00000490475 RAB5CP51148 216 aa7.69□□□□□ -1.18
TTC28-207ENST00000490475 CAV2P51636 162 aa7.69□□□□□ -1.18
TTC28-207ENST00000490475 RND2P52198 227 aa7.69□□□□□ -1.18
TTC28-207ENST00000490475 TIGITQ495A1 244 aa7.69□□□□□ -1.18
TTC28-207ENST00000490475 TOMM20LQ6UXN7 152 aa7.69□□□□□ -1.18
TTC28-207ENST00000490475 OR1S2Q8NGQ3 325 aa7.69□□□□□ -1.18
TTC28-207ENST00000490475 GATAD1Q8WUU5 269 aa7.69□□□□□ -1.18
TTC28-207ENST00000490475 NPIPB3Q92617 1050 aa7.69□□□□□ -1.18
TTC28-207ENST00000490475 RNF183Q96D59 192 aa7.69□□□□□ -1.18
TTC28-207ENST00000490475 NARS2Q96I59 477 aaKnown RBP7.69□□□□□ -1.18
TTC28-207ENST00000490475 CYTL1Q9NRR1 136 aa7.69□□□□□ -1.18
TTC28-207ENST00000490475 SMPXQ9UHP9 88 aa7.69□□□□□ -1.18
TTC28-207ENST00000490475 STARD9Q9P2P6 4700 aa7.68□□□□□ -1.18
TTC28-207ENST00000490475 IGHV3OR16-13A0A075B7E8 117 aa7.68□□□□□ -1.18
TTC28-207ENST00000490475 IGHV3-74A0A0B4J1X5 117 aa7.68□□□□□ -1.18
TTC28-207ENST00000490475 IGKV1-17P01599 117 aa7.68□□□□□ -1.18
TTC28-207ENST00000490475 NKX2-1P43699 371 aaPredicted RBP7.68□□□□□ -1.18
TTC28-207ENST00000490475 SULT1A2P50226 295 aa7.68□□□□□ -1.18
TTC28-207ENST00000490475 ATP5IP56385 69 aaPredicted RBP7.68□□□□□ -1.18
TTC28-207ENST00000490475 DEFB135Q30KP9 77 aa7.68□□□□□ -1.18
TTC28-207ENST00000490475 SPANXN5Q5MJ07 72 aa7.68□□□□□ -1.18
TTC28-207ENST00000490475 ETFRF1Q6IPR1 90 aa7.68□□□□□ -1.18
TTC28-207ENST00000490475 LINC00518Q8N0U6 118 aa7.68□□□□□ -1.18
TTC28-207ENST00000490475 TMEM116Q8NCL8 245 aa7.68□□□□□ -1.18
TTC28-207ENST00000490475 LYPD6BQ8NI32 183 aa7.68□□□□□ -1.18
TTC28-207ENST00000490475 LINC00476Q8WZB0 136 aa7.68□□□□□ -1.18
TTC28-207ENST00000490475 ACY3Q96HD9 319 aa7.68□□□□□ -1.18
TTC28-207ENST00000490475 CIB3Q96Q77 187 aaPredicted RBP7.68□□□□□ -1.18
TTC28-207ENST00000490475 TMEM231Q9H6L2 316 aa7.68□□□□□ -1.18
TTC28-207ENST00000490475 BIN3Q9NQY0 253 aa7.68□□□□□ -1.18
TTC28-207ENST00000490475 PUS1Q9Y606 427 aaKnown RBP eCLIP7.68□□□□□ -1.18
TTC28-207ENST00000490475 IGHV7-4-1A0A0J9YVY3 117 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 A0A0J9YWU9 116 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 H3BP45 60 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 SSSCA1O60232 199 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 DFFBO76075 338 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 SCGB1D2O95969 90 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 MBPP02686 304 aaPredicted RBP7.67□□□□□ -1.18
TTC28-207ENST00000490475 APOHP02749 345 aaPredicted RBP7.67□□□□□ -1.18
TTC28-207ENST00000490475 SEC11BP0C7V7 166 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 IGLC1P0CG04 106 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 PVALBP20472 110 aaPredicted RBP7.67□□□□□ -1.18
TTC28-207ENST00000490475 OR10J1P30954 320 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 GPX4P36969 197 aaPredicted RBP7.67□□□□□ -1.18
TTC28-207ENST00000490475 PAX9P55771 341 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 RAB11AP62491 216 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 RPP30P78346 268 aaKnown RBP7.67□□□□□ -1.18
TTC28-207ENST00000490475 GAMTQ14353 236 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 ODF3L2Q3SX64 289 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 RNF212Q495C1 297 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 LRRC37A5PQ49AS3 106 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 CEMP1Q6PRD7 247 aaPredicted RBP7.67□□□□□ -1.18
TTC28-207ENST00000490475 ZNF600Q6ZNG1 722 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 LILRB2Q8N423 598 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 RHPN1-AS1Q9BWJ2 59 aa7.67□□□□□ -1.18
TTC28-207ENST00000490475 CSTL1Q9H114 145 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms