RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 HSPB11Q9Y547 144 aa10.78□□□□□ -0.68
HLA-F-229ENST00000489502 SMAD5-AS1Q9Y6J3 95 aa10.78□□□□□ -0.68
HLA-F-229ENST00000489502 OR4C46A6NHA9 309 aa10.77□□□□□ -0.69
HLA-F-229ENST00000489502 BUB3O43684 328 aa10.77□□□□□ -0.69
HLA-F-229ENST00000489502 IGHV4-30-4P0DP06 118 aa10.77□□□□□ -0.69
HLA-F-229ENST00000489502 RPL12P30050 165 aaKnown RBP10.77□□□□□ -0.69
HLA-F-229ENST00000489502 CAMLGP49069 296 aa10.77□□□□□ -0.69
HLA-F-229ENST00000489502 SELENOTP62341 195 aa10.77□□□□□ -0.69
HLA-F-229ENST00000489502 WFDC3Q8IUB2 231 aa10.77□□□□□ -0.69
HLA-F-229ENST00000489502 DEFB125Q8N687 156 aa10.77□□□□□ -0.69
HLA-F-229ENST00000489502 OR2T35Q8NGX2 323 aa10.77□□□□□ -0.69
HLA-F-229ENST00000489502 CHAC2Q8WUX2 184 aa10.77□□□□□ -0.69
HLA-F-229ENST00000489502 MS4A6AQ9H2W1 248 aa10.77□□□□□ -0.69
HLA-F-229ENST00000489502 SLC45A2Q9UMX9 530 aa10.77□□□□□ -0.69
HLA-F-229ENST00000489502 G3V3Q6 166 aa10.76□□□□□ -0.69
HLA-F-229ENST00000489502 CFDP00746 253 aaPredicted RBP10.76□□□□□ -0.69
HLA-F-229ENST00000489502 OR5G3P0C626 314 aa10.76□□□□□ -0.69
HLA-F-229ENST00000489502 NUP62P37198 522 aaPredicted RBP10.76□□□□□ -0.69
HLA-F-229ENST00000489502 OPCMLQ14982 345 aa10.76□□□□□ -0.69
HLA-F-229ENST00000489502 ATP6V1FQ16864 119 aa10.76□□□□□ -0.69
HLA-F-229ENST00000489502 ODF3L2Q3SX64 289 aa10.76□□□□□ -0.69
HLA-F-229ENST00000489502 MIC13Q5XKP0 118 aa10.76□□□□□ -0.69
HLA-F-229ENST00000489502 FAM24BQ8N5W8 94 aa10.76□□□□□ -0.69
HLA-F-229ENST00000489502 ASB13Q8WXK3 278 aa10.76□□□□□ -0.69
HLA-F-229ENST00000489502 UHRF2Q96PU4 802 aa10.76□□□□□ -0.69
HLA-F-229ENST00000489502 SCRT1Q9BWW7 348 aa10.76□□□□□ -0.69
HLA-F-229ENST00000489502 ARL6Q9H0F7 186 aa10.76□□□□□ -0.69
HLA-F-229ENST00000489502 SLC25A22Q9H936 323 aa10.76□□□□□ -0.69
HLA-F-229ENST00000489502 C19orf73Q9NVV2 129 aa10.76□□□□□ -0.69
HLA-F-229ENST00000489502 FXYD6-FXYD2A0A087WZ82 144 aa10.75□□□□□ -0.69
HLA-F-229ENST00000489502 HELTA6NFD8 242 aa10.75□□□□□ -0.69
HLA-F-229ENST00000489502 OR11H12B2RN74 326 aa10.75□□□□□ -0.69
HLA-F-229ENST00000489502 SMLR1H3BR10 107 aa10.75□□□□□ -0.69
HLA-F-229ENST00000489502 H3BRN7 92 aa10.75□□□□□ -0.69
HLA-F-229ENST00000489502 FRMD6-AS1P0C7T7 363 aa10.75□□□□□ -0.69
HLA-F-229ENST00000489502 LEMD1Q68G75 181 aa10.75□□□□□ -0.69
HLA-F-229ENST00000489502 SIGLEC15Q6ZMC9 328 aa10.75□□□□□ -0.69
HLA-F-229ENST00000489502 ATP5SQ99766 215 aa10.75□□□□□ -0.69
HLA-F-229ENST00000489502 SRD5A3Q9H8P0 318 aa10.75□□□□□ -0.69
HLA-F-229ENST00000489502 HIGD1AQ9Y241 93 aa10.75□□□□□ -0.69
HLA-F-229ENST00000489502 DNASE2O00115 360 aaPredicted RBP10.74□□□□□ -0.69
HLA-F-229ENST00000489502 HYPMO75409 117 aa10.74□□□□□ -0.69
HLA-F-229ENST00000489502 CD5P06127 495 aa10.74□□□□□ -0.69
HLA-F-229ENST00000489502 PLP1P60201 277 aa10.74□□□□□ -0.69
HLA-F-229ENST00000489502 FGL1Q08830 312 aa10.74□□□□□ -0.69
HLA-F-229ENST00000489502 RAB31Q13636 194 aa10.74□□□□□ -0.69
HLA-F-229ENST00000489502 PATE2Q6UY27 113 aa10.74□□□□□ -0.69
HLA-F-229ENST00000489502 NPCDR1Q9BY65 106 aa10.74□□□□□ -0.69
HLA-F-229ENST00000489502 SLC25A39Q9BZJ4 359 aaPredicted RBP10.74□□□□□ -0.69
HLA-F-229ENST00000489502 SLC25A32Q9H2D1 315 aa10.74□□□□□ -0.69
HLA-F-229ENST00000489502 FBXL17Q9UF56 701 aa10.74□□□□□ -0.69
HLA-F-229ENST00000489502 PFDN2Q9UHV9 154 aa10.74□□□□□ -0.69
HLA-F-229ENST00000489502 PXMP4Q9Y6I8 212 aa10.74□□□□□ -0.69
HLA-F-229ENST00000489502 ZNF98A6NK75 572 aa10.73□□□□□ -0.69
HLA-F-229ENST00000489502 COX7A2P2O60397 106 aa10.73□□□□□ -0.69
HLA-F-229ENST00000489502 PAFAH1B2P68402 229 aa10.73□□□□□ -0.69
HLA-F-229ENST00000489502 PRR20EP86478 221 aa10.73□□□□□ -0.69
HLA-F-229ENST00000489502 PRR20CP86479 221 aa10.73□□□□□ -0.69
HLA-F-229ENST00000489502 PRR20DP86480 221 aa10.73□□□□□ -0.69
HLA-F-229ENST00000489502 PRR20BP86481 221 aa10.73□□□□□ -0.69
HLA-F-229ENST00000489502 PRR20AP86496 221 aa10.73□□□□□ -0.69
HLA-F-229ENST00000489502 ZNF124Q15973 351 aa10.73□□□□□ -0.69
HLA-F-229ENST00000489502 OR8I2Q8N0Y5 310 aa10.73□□□□□ -0.69
HLA-F-229ENST00000489502 DCANP1Q8TF63 244 aa10.73□□□□□ -0.69
HLA-F-229ENST00000489502 ASCL2Q99929 193 aa10.73□□□□□ -0.69
HLA-F-229ENST00000489502 SHANK2-AS3Q9BTD1 123 aa10.73□□□□□ -0.69
HLA-F-229ENST00000489502 WDR61Q9GZS3 305 aaKnown RBP10.73□□□□□ -0.69
HLA-F-229ENST00000489502 ARV1Q9H2C2 271 aa10.73□□□□□ -0.69
HLA-F-229ENST00000489502 TUBA4BQ9H853 241 aa10.73□□□□□ -0.69
HLA-F-229ENST00000489502 MAP6D1Q9H9H5 199 aa10.73□□□□□ -0.69
HLA-F-229ENST00000489502 WFDC1Q9HC57 220 aa10.73□□□□□ -0.69
HLA-F-229ENST00000489502 hCG_2014768A0A024R1R8 64 aa10.72□□□□□ -0.69
HLA-F-229ENST00000489502 RNF222A6NCQ9 220 aa10.72□□□□□ -0.69
HLA-F-229ENST00000489502 K7EQG2 157 aa10.72□□□□□ -0.69
HLA-F-229ENST00000489502 B2MP61769 119 aa10.72□□□□□ -0.69
HLA-F-229ENST00000489502 Q6ZNX1 250 aa10.72□□□□□ -0.69
HLA-F-229ENST00000489502 APRG1Q8IVJ8 170 aa10.72□□□□□ -0.69
HLA-F-229ENST00000489502 AQP10Q96PS8 301 aa10.72□□□□□ -0.69
HLA-F-229ENST00000489502 CITED4Q96RK1 184 aa10.72□□□□□ -0.69
HLA-F-229ENST00000489502 B9D2Q9BPU9 175 aa10.72□□□□□ -0.69
HLA-F-229ENST00000489502 NRN1Q9NPD7 142 aa10.72□□□□□ -0.69
HLA-F-229ENST00000489502 SLC39A9Q9NUM3 307 aa10.72□□□□□ -0.69
HLA-F-229ENST00000489502 COL7A1Q02388 2944 aa10.72□□□□□ -0.69
HLA-F-229ENST00000489502 DNAH9Q9NYC9 4486 aa10.72□□□□□ -0.69
HLA-F-229ENST00000489502 TRAV2A0A0B4J234 112 aa10.71□□□□□ -0.69
HLA-F-229ENST00000489502 MPDU1O75352 247 aa10.71□□□□□ -0.69
HLA-F-229ENST00000489502 ZNF688P0C7X2 276 aa10.71□□□□□ -0.69
HLA-F-229ENST00000489502 RPL29P47914 159 aaKnown RBP10.71□□□□□ -0.69
HLA-F-229ENST00000489502 GCSAMLQ5JQS6 135 aa10.71□□□□□ -0.69
HLA-F-229ENST00000489502 C1orf194Q5T5A4 169 aa10.71□□□□□ -0.69
HLA-F-229ENST00000489502 MORN5Q5VZ52 161 aa10.71□□□□□ -0.69
HLA-F-229ENST00000489502 TMEM37Q8WXS4 190 aa10.71□□□□□ -0.69
HLA-F-229ENST00000489502 RSG1Q9BU20 258 aa10.71□□□□□ -0.69
HLA-F-229ENST00000489502 TENM3Q9P273 2699 aa10.7□□□□□ -0.7
HLA-F-229ENST00000489502 RBMY1BA6NDE4 496 aaKnown RBP10.7□□□□□ -0.7
HLA-F-229ENST00000489502 RBMY1EA6NEQ0 496 aaKnown RBP10.7□□□□□ -0.7
HLA-F-229ENST00000489502 A8MZ25 164 aa10.7□□□□□ -0.7
HLA-F-229ENST00000489502 IFNA5P01569 189 aa10.7□□□□□ -0.7
HLA-F-229ENST00000489502 RBMY1DP0C7P1 496 aaKnown RBP10.7□□□□□ -0.7
HLA-F-229ENST00000489502 AP2S1P53680 142 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms