RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 PRR20CP86479 221 aa10.9□□□□□ -0.66
CLDN11-209ENST00000489485 PRR20DP86480 221 aa10.9□□□□□ -0.66
CLDN11-209ENST00000489485 PRR20BP86481 221 aa10.9□□□□□ -0.66
CLDN11-209ENST00000489485 PRR20AP86496 221 aa10.9□□□□□ -0.66
CLDN11-209ENST00000489485 KLF5Q13887 457 aaPredicted RBP10.9□□□□□ -0.66
CLDN11-209ENST00000489485 FAM74A1Q5RGS3 127 aa10.9□□□□□ -0.66
CLDN11-209ENST00000489485 EIF5AL1Q6IS14 154 aaKnown RBP10.9□□□□□ -0.66
CLDN11-209ENST00000489485 ZNF600Q6ZNG1 722 aa10.9□□□□□ -0.66
CLDN11-209ENST00000489485 Q8WTZ3 238 aa10.9□□□□□ -0.66
CLDN11-209ENST00000489485 PSMG3Q9BT73 122 aaPredicted RBP10.9□□□□□ -0.66
CLDN11-209ENST00000489485 C20orf24Q9BUV8 137 aa10.9□□□□□ -0.66
CLDN11-209ENST00000489485 TIMM9Q9Y5J7 89 aa10.9□□□□□ -0.66
CLDN11-209ENST00000489485 PKD1L1Q8TDX9 2849 aa10.9□□□□□ -0.67
CLDN11-209ENST00000489485 NDUFA4O00483 81 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 FABP1P07148 127 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 FFAR4Q5NUL3 377 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 UNQ9165/PRO28630Q6UXU0 137 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 Q6ZRG5 221 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 C1QL4Q86Z23 238 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 OR51G1Q8NGK1 321 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 RCC1LQ96I51 464 aaKnown RBP10.89□□□□□ -0.67
CLDN11-209ENST00000489485 PBDC1Q9BVG4 233 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 SLC39A9Q9NUM3 307 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 PRELID1Q9Y255 219 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 NOTCH3Q9UM47 2321 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 IL4P05112 153 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 SEC11BP0C7V7 166 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 ORM2P19652 201 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 SERF2P84101 59 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 GCSAMLQ5JQS6 135 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 LINC00482Q8N8I6 264 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 ZNF414Q96IQ9 312 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 VSIRQ9H7M9 311 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 KCNIP2Q9NS61 270 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 DOK5Q9P104 306 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 ANK2Q01484 3957 aa10.89□□□□□ -0.67
CLDN11-209ENST00000489485 OVOL1O14753 267 aa10.88□□□□□ -0.67
CLDN11-209ENST00000489485 LYZP61626 148 aa10.88□□□□□ -0.67
CLDN11-209ENST00000489485 TOMM20LQ6UXN7 152 aa10.88□□□□□ -0.67
CLDN11-209ENST00000489485 OR1B1Q8NGR6 318 aa10.88□□□□□ -0.67
CLDN11-209ENST00000489485 NARS2Q96I59 477 aaKnown RBP10.88□□□□□ -0.67
CLDN11-209ENST00000489485 NKX6-2Q9C056 277 aaPredicted RBP10.88□□□□□ -0.67
CLDN11-209ENST00000489485 PLA2G2EQ9NZK7 142 aa10.88□□□□□ -0.67
CLDN11-209ENST00000489485 CD33P20138 364 aa10.87□□□□□ -0.67
CLDN11-209ENST00000489485 IL34Q6ZMJ4 242 aa10.87□□□□□ -0.67
CLDN11-209ENST00000489485 SVBPQ8N300 66 aa10.87□□□□□ -0.67
CLDN11-209ENST00000489485 OR9G4Q8NGQ1 327 aa10.87□□□□□ -0.67
CLDN11-209ENST00000489485 TMEM190Q8WZ59 177 aa10.87□□□□□ -0.67
CLDN11-209ENST00000489485 RNF125Q96EQ8 232 aa10.87□□□□□ -0.67
CLDN11-209ENST00000489485 LGALS9O00182 355 aa10.87□□□□□ -0.67
CLDN11-209ENST00000489485 ZNF207O43670 478 aaKnown RBP10.87□□□□□ -0.67
CLDN11-209ENST00000489485 OR5G3P0C626 314 aa10.87□□□□□ -0.67
CLDN11-209ENST00000489485 TM4SF20Q53R12 229 aa10.87□□□□□ -0.67
CLDN11-209ENST00000489485 TMEM37Q8WXS4 190 aa10.87□□□□□ -0.67
CLDN11-209ENST00000489485 SAT2Q96F10 170 aaPredicted RBP10.87□□□□□ -0.67
CLDN11-209ENST00000489485 PEMTQ9UBM1 199 aa10.87□□□□□ -0.67
CLDN11-209ENST00000489485 WI2-2373I1.2A0A1W2PRP0 233 aa10.86□□□□□ -0.67
CLDN11-209ENST00000489485 TMEM218A2RU14 115 aa10.86□□□□□ -0.67
CLDN11-209ENST00000489485 RAB2AP61019 212 aa10.86□□□□□ -0.67
CLDN11-209ENST00000489485 USF2Q15853 346 aaPredicted RBP10.86□□□□□ -0.67
CLDN11-209ENST00000489485 AKR1C8PQ5T2L2 129 aa10.86□□□□□ -0.67
CLDN11-209ENST00000489485 REC114Q7Z4M0 266 aa10.86□□□□□ -0.67
CLDN11-209ENST00000489485 UHRF2Q96PU4 802 aa10.86□□□□□ -0.67
CLDN11-209ENST00000489485 ZFAND3Q9H8U3 227 aa10.86□□□□□ -0.67
CLDN11-209ENST00000489485 DAZ1Q9NQZ3 744 aaKnown RBP10.86□□□□□ -0.67
CLDN11-209ENST00000489485 UFC1Q9Y3C8 167 aa10.86□□□□□ -0.67
CLDN11-209ENST00000489485 COX7A2P2O60397 106 aa10.85□□□□□ -0.67
CLDN11-209ENST00000489485 FHITP49789 147 aa10.85□□□□□ -0.67
CLDN11-209ENST00000489485 PATE2Q6UY27 113 aa10.85□□□□□ -0.67
CLDN11-209ENST00000489485 CLRN3Q8NCR9 226 aa10.85□□□□□ -0.67
CLDN11-209ENST00000489485 OR10G4Q8NGN3 311 aa10.85□□□□□ -0.67
CLDN11-209ENST00000489485 OR10G9Q8NGN4 311 aa10.85□□□□□ -0.67
CLDN11-209ENST00000489485 OR10G7Q8NGN6 311 aa10.85□□□□□ -0.67
CLDN11-209ENST00000489485 DNAJC4Q9NNZ3 241 aa10.85□□□□□ -0.67
CLDN11-209ENST00000489485 RPRMQ9NS64 109 aa10.85□□□□□ -0.67
CLDN11-209ENST00000489485 TMEM238LA0A1B0GVL6 79 aa10.85□□□□□ -0.67
CLDN11-209ENST00000489485 A8MWP6 167 aa10.85□□□□□ -0.67
CLDN11-209ENST00000489485 HYPMO75409 117 aa10.85□□□□□ -0.67
CLDN11-209ENST00000489485 BTF3P20290 206 aaKnown RBP10.85□□□□□ -0.67
CLDN11-209ENST00000489485 PLP1P60201 277 aa10.85□□□□□ -0.67
CLDN11-209ENST00000489485 ACOT6Q3I5F7 207 aaPredicted RBP10.85□□□□□ -0.67
CLDN11-209ENST00000489485 RPP25LQ8N5L8 163 aaKnown RBP10.85□□□□□ -0.67
CLDN11-209ENST00000489485 ELOVL1Q9BW60 279 aa10.85□□□□□ -0.67
CLDN11-209ENST00000489485 SEPSECSQ9HD40 501 aaKnown RBP10.85□□□□□ -0.67
CLDN11-209ENST00000489485 TMEM213A2RRL7 107 aa10.84□□□□□ -0.67
CLDN11-209ENST00000489485 UMAD1C9J7I0 102 aa10.84□□□□□ -0.67
CLDN11-209ENST00000489485 DNASE2O00115 360 aaPredicted RBP10.84□□□□□ -0.67
CLDN11-209ENST00000489485 EIF3GO75821 320 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLDN11-209ENST00000489485 MBP02144 154 aa10.84□□□□□ -0.67
CLDN11-209ENST00000489485 EDN2P20800 178 aa10.84□□□□□ -0.67
CLDN11-209ENST00000489485 TMEM41BQ5BJD5 291 aa10.84□□□□□ -0.67
CLDN11-209ENST00000489485 FAM78BQ5VT40 261 aa10.84□□□□□ -0.67
CLDN11-209ENST00000489485 C10orf113Q5VZT2 155 aa10.84□□□□□ -0.67
CLDN11-209ENST00000489485 LINC00305Q7Z4B0 112 aa10.84□□□□□ -0.67
CLDN11-209ENST00000489485 PFDN5Q99471 154 aa10.84□□□□□ -0.67
CLDN11-209ENST00000489485 ELOA3CA0A087WX78 387 aaPredicted RBP10.83□□□□□ -0.68
CLDN11-209ENST00000489485 IGHV3-49A0A0A0MS15 119 aa10.83□□□□□ -0.68
CLDN11-209ENST00000489485 C2orf70A6NJV1 201 aa10.83□□□□□ -0.68
CLDN11-209ENST00000489485 SEC14L6B5MCN3 397 aa10.83□□□□□ -0.68
CLDN11-209ENST00000489485 K7EMT4 169 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms