RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 NRN1Q9NPD7 142 aa10.56□□□□□ -0.72
BRCA1-218ENST00000489037 C7orf66A4D0T2 115 aa10.55□□□□□ -0.72
BRCA1-218ENST00000489037 FNDC10F2Z333 226 aa10.55□□□□□ -0.72
BRCA1-218ENST00000489037 INMT-MINDY4F8WBC2 141 aa10.55□□□□□ -0.72
BRCA1-218ENST00000489037 K7EPK0 472 aa10.55□□□□□ -0.72
BRCA1-218ENST00000489037 ORM2P19652 201 aa10.55□□□□□ -0.72
BRCA1-218ENST00000489037 S100A10P60903 97 aa10.55□□□□□ -0.72
BRCA1-218ENST00000489037 SELENOTP62341 195 aa10.55□□□□□ -0.72
BRCA1-218ENST00000489037 DEFB135Q30KP9 77 aa10.55□□□□□ -0.72
BRCA1-218ENST00000489037 CYP2G1PQ6ZSU1 146 aa10.55□□□□□ -0.72
BRCA1-218ENST00000489037 FAM24BQ8N5W8 94 aa10.55□□□□□ -0.72
BRCA1-218ENST00000489037 DCANP1Q8TF63 244 aa10.55□□□□□ -0.72
BRCA1-218ENST00000489037 OVOL2Q9BRP0 275 aa10.55□□□□□ -0.72
BRCA1-218ENST00000489037 SEPSECSQ9HD40 501 aaKnown RBP10.55□□□□□ -0.72
BRCA1-218ENST00000489037 SLC45A2Q9UMX9 530 aa10.55□□□□□ -0.72
BRCA1-218ENST00000489037 PMS2P5A8MQ11 134 aa10.54□□□□□ -0.72
BRCA1-218ENST00000489037 ID1P41134 155 aa10.54□□□□□ -0.72
BRCA1-218ENST00000489037 CAV2P51636 162 aa10.54□□□□□ -0.72
BRCA1-218ENST00000489037 IFITM3Q01628 133 aa10.54□□□□□ -0.72
BRCA1-218ENST00000489037 PSMG4Q5JS54 123 aa10.54□□□□□ -0.72
BRCA1-218ENST00000489037 TEPPQ6URK8 271 aa10.54□□□□□ -0.72
BRCA1-218ENST00000489037 NRARPQ7Z6K4 114 aa10.54□□□□□ -0.72
BRCA1-218ENST00000489037 OR1B1Q8NGR6 318 aa10.54□□□□□ -0.72
BRCA1-218ENST00000489037 GGACTQ9BVM4 153 aa10.54□□□□□ -0.72
BRCA1-218ENST00000489037 DEDDO75618 318 aa10.53□□□□□ -0.72
BRCA1-218ENST00000489037 CCNKO75909 580 aa10.53□□□□□ -0.72
BRCA1-218ENST00000489037 RLN2P04090 185 aa10.53□□□□□ -0.72
BRCA1-218ENST00000489037 GATA2P23769 480 aaPredicted RBP10.53□□□□□ -0.72
BRCA1-218ENST00000489037 GALR1P47211 349 aa10.53□□□□□ -0.72
BRCA1-218ENST00000489037 RAP2BP61225 183 aa10.53□□□□□ -0.72
BRCA1-218ENST00000489037 SAMD13Q5VXD3 122 aa10.53□□□□□ -0.72
BRCA1-218ENST00000489037 RNF183Q96D59 192 aa10.53□□□□□ -0.72
BRCA1-218ENST00000489037 GOSR2O14653 212 aa10.52□□□□□ -0.73
BRCA1-218ENST00000489037 CA1P00915 261 aaPredicted RBP10.52□□□□□ -0.73
BRCA1-218ENST00000489037 RAB31Q13636 194 aa10.52□□□□□ -0.73
BRCA1-218ENST00000489037 TMEM41BQ5BJD5 291 aa10.52□□□□□ -0.73
BRCA1-218ENST00000489037 ACTL10Q5JWF8 245 aa10.52□□□□□ -0.73
BRCA1-218ENST00000489037 CASC10Q5T4H9 136 aa10.52□□□□□ -0.73
BRCA1-218ENST00000489037 MORN3Q6PF18 240 aaPredicted RBP10.52□□□□□ -0.73
BRCA1-218ENST00000489037 GATAD1Q8WUU5 269 aa10.52□□□□□ -0.73
BRCA1-218ENST00000489037 GPR82Q96P67 336 aa10.52□□□□□ -0.73
BRCA1-218ENST00000489037 SLC25A22Q9H936 323 aa10.52□□□□□ -0.73
BRCA1-218ENST00000489037 RNF24Q9Y225 148 aa10.52□□□□□ -0.73
BRCA1-218ENST00000489037 ZNF98A6NK75 572 aa10.51□□□□□ -0.73
BRCA1-218ENST00000489037 KNCNA6PVL3 124 aa10.51□□□□□ -0.73
BRCA1-218ENST00000489037 HYPMO75409 117 aa10.51□□□□□ -0.73
BRCA1-218ENST00000489037 OR5G3P0C626 314 aa10.51□□□□□ -0.73
BRCA1-218ENST00000489037 LINC00869P0C866 280 aa10.51□□□□□ -0.73
BRCA1-218ENST00000489037 SPP1P10451 314 aa10.51□□□□□ -0.73
BRCA1-218ENST00000489037 MEOX2P50222 304 aa10.51□□□□□ -0.73
BRCA1-218ENST00000489037 CYCSP99999 105 aaKnown RBP10.51□□□□□ -0.73
BRCA1-218ENST00000489037 SLC38A11Q08AI6 406 aa10.51□□□□□ -0.73
BRCA1-218ENST00000489037 RAB32Q13637 225 aa10.51□□□□□ -0.73
BRCA1-218ENST00000489037 ZFAND6Q6FIF0 208 aa10.51□□□□□ -0.73
BRCA1-218ENST00000489037 STX12Q86Y82 276 aa10.51□□□□□ -0.73
BRCA1-218ENST00000489037 TMEM217Q8N7C4 229 aa10.51□□□□□ -0.73
BRCA1-218ENST00000489037 MARVELD1Q9BSK0 173 aa10.51□□□□□ -0.73
BRCA1-218ENST00000489037 HIGD1AQ9Y241 93 aa10.51□□□□□ -0.73
BRCA1-218ENST00000489037 FAM24AA6NFZ4 105 aa10.5□□□□□ -0.73
BRCA1-218ENST00000489037 SSNA1O43805 119 aa10.5□□□□□ -0.73
BRCA1-218ENST00000489037 CST7O76096 145 aa10.5□□□□□ -0.73
BRCA1-218ENST00000489037 HBG1P69891 147 aa10.5□□□□□ -0.73
BRCA1-218ENST00000489037 HBG2P69892 147 aa10.5□□□□□ -0.73
BRCA1-218ENST00000489037 PXDC1Q5TGL8 231 aa10.5□□□□□ -0.73
BRCA1-218ENST00000489037 TMEM182Q6ZP80 229 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-218ENST00000489037 ZNF546Q86UE3 836 aa10.5□□□□□ -0.73
BRCA1-218ENST00000489037 LINC00052Q96N35 136 aa10.5□□□□□ -0.73
BRCA1-218ENST00000489037 RARRES2Q99969 163 aa10.5□□□□□ -0.73
BRCA1-218ENST00000489037 LYRM2Q9NU23 88 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-218ENST00000489037 DOK5Q9P104 306 aa10.5□□□□□ -0.73
BRCA1-218ENST00000489037 DNAH7Q8WXX0 4024 aa10.5□□□□□ -0.73
BRCA1-218ENST00000489037 S100A11P31949 105 aa10.49□□□□□ -0.73
BRCA1-218ENST00000489037 PSMB3P49720 205 aa10.49□□□□□ -0.73
BRCA1-218ENST00000489037 SULT1A1P50225 295 aa10.49□□□□□ -0.73
BRCA1-218ENST00000489037 PLP1P60201 277 aa10.49□□□□□ -0.73
BRCA1-218ENST00000489037 NUTF2P61970 127 aaKnown RBP10.49□□□□□ -0.73
BRCA1-218ENST00000489037 ARL16Q0P5N6 197 aa10.49□□□□□ -0.73
BRCA1-218ENST00000489037 IL15RAQ13261 267 aa10.49□□□□□ -0.73
BRCA1-218ENST00000489037 TRPT1Q86TN4 253 aaKnown RBP10.49□□□□□ -0.73
BRCA1-218ENST00000489037 C16orf92Q96LL3 132 aa10.49□□□□□ -0.73
BRCA1-218ENST00000489037 RSG1Q9BU20 258 aa10.49□□□□□ -0.73
BRCA1-218ENST00000489037 NMES1Q9C002 83 aa10.49□□□□□ -0.73
BRCA1-218ENST00000489037 ARL6Q9H0F7 186 aa10.49□□□□□ -0.73
BRCA1-218ENST00000489037 UQCC1Q9NVA1 299 aa10.49□□□□□ -0.73
BRCA1-218ENST00000489037 A0A0J9YWU9 116 aa10.48□□□□□ -0.73
BRCA1-218ENST00000489037 ISLRO14498 428 aa10.48□□□□□ -0.73
BRCA1-218ENST00000489037 AGPAT2O15120 278 aa10.48□□□□□ -0.73
BRCA1-218ENST00000489037 SIX6O95475 246 aa10.48□□□□□ -0.73
BRCA1-218ENST00000489037 RPL7P18124 248 aaKnown RBP10.48□□□□□ -0.73
BRCA1-218ENST00000489037 ATF4P18848 351 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-218ENST00000489037 ATP6V1FQ16864 119 aa10.48□□□□□ -0.73
BRCA1-218ENST00000489037 TMEM252Q8N6L7 170 aa10.48□□□□□ -0.73
BRCA1-218ENST00000489037 SHANK2-AS3Q9BTD1 123 aa10.48□□□□□ -0.73
BRCA1-218ENST00000489037 SLC25A39Q9BZJ4 359 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-218ENST00000489037 SLC25A31Q9H0C2 315 aa10.48□□□□□ -0.73
BRCA1-218ENST00000489037 SLC25A32Q9H2D1 315 aa10.48□□□□□ -0.73
BRCA1-218ENST00000489037 C11orf1Q9H5F2 150 aa10.48□□□□□ -0.73
BRCA1-218ENST00000489037 E5RGE8 158 aa10.47□□□□□ -0.73
BRCA1-218ENST00000489037 H3BRN7 92 aa10.47□□□□□ -0.73
BRCA1-218ENST00000489037 CAMLGP49069 296 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms