RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 PQLC2Q6ZP29 291 aa8.22□□□□□ -1.09
USP11-209ENST00000488848 SSX7Q7RTT5 188 aa8.22□□□□□ -1.09
USP11-209ENST00000488848 FAM213BQ8TBF2 198 aa8.22□□□□□ -1.09
USP11-209ENST00000488848 RAB24Q969Q5 203 aa8.22□□□□□ -1.09
USP11-209ENST00000488848 SHANK2-AS3Q9BTD1 123 aa8.22□□□□□ -1.09
USP11-209ENST00000488848 SMDT1Q9H4I9 107 aa8.22□□□□□ -1.09
USP11-209ENST00000488848 GNB4Q9HAV0 340 aa8.22□□□□□ -1.09
USP11-209ENST00000488848 TMEM14CQ9P0S9 112 aa8.22□□□□□ -1.09
USP11-209ENST00000488848 RNF114Q9Y508 228 aa8.22□□□□□ -1.09
USP11-209ENST00000488848 PUS1Q9Y606 427 aaKnown RBP eCLIP8.22□□□□□ -1.09
USP11-209ENST00000488848 RAB19A4D1S5 217 aa8.21□□□□□ -1.1
USP11-209ENST00000488848 MAP1LC3B2A6NCE7 125 aa8.21□□□□□ -1.1
USP11-209ENST00000488848 TEX46H3BTG2 121 aa8.21□□□□□ -1.1
USP11-209ENST00000488848 COX7A2P2O60397 106 aa8.21□□□□□ -1.1
USP11-209ENST00000488848 TRBV12-3P01733 135 aa8.21□□□□□ -1.1
USP11-209ENST00000488848 HSPB1P04792 205 aaKnown RBP8.21□□□□□ -1.1
USP11-209ENST00000488848 IL4P05112 153 aa8.21□□□□□ -1.1
USP11-209ENST00000488848 C8orf88P0DMB2 117 aa8.21□□□□□ -1.1
USP11-209ENST00000488848 TAGLN2P37802 199 aaKnown RBP8.21□□□□□ -1.1
USP11-209ENST00000488848 PSMB3P49720 205 aa8.21□□□□□ -1.1
USP11-209ENST00000488848 PPT1P50897 306 aa8.21□□□□□ -1.1
USP11-209ENST00000488848 TAS2R45P59539 299 aa8.21□□□□□ -1.1
USP11-209ENST00000488848 C1orf194Q5T5A4 169 aa8.21□□□□□ -1.1
USP11-209ENST00000488848 C10orf113Q5VZT2 155 aa8.21□□□□□ -1.1
USP11-209ENST00000488848 SCRT1Q9BWW7 348 aa8.21□□□□□ -1.1
USP11-209ENST00000488848 SLC25A39Q9BZJ4 359 aaPredicted RBP8.21□□□□□ -1.1
USP11-209ENST00000488848 MAP1LC3BQ9GZQ8 125 aa8.21□□□□□ -1.1
USP11-209ENST00000488848 HIGD1AQ9Y241 93 aa8.21□□□□□ -1.1
USP11-209ENST00000488848 TSSC4Q9Y5U2 329 aaPredicted RBP8.21□□□□□ -1.1
USP11-209ENST00000488848 WNK1Q9H4A3 2382 aa8.2□□□□□ -1.1
USP11-209ENST00000488848 ADARB2-AS1A8MUL3 147 aa8.2□□□□□ -1.1
USP11-209ENST00000488848 MRPS12O15235 138 aaKnown RBP8.2□□□□□ -1.1
USP11-209ENST00000488848 CXorf1O96002 111 aa8.2□□□□□ -1.1
USP11-209ENST00000488848 IGHV3-23P01764 117 aa8.2□□□□□ -1.1
USP11-209ENST00000488848 GP9P14770 177 aa8.2□□□□□ -1.1
USP11-209ENST00000488848 ZP3P21754 424 aa8.2□□□□□ -1.1
USP11-209ENST00000488848 KHDC3LQ587J8 217 aa8.2□□□□□ -1.1
USP11-209ENST00000488848 FAM78BQ5VT40 261 aa8.2□□□□□ -1.1
USP11-209ENST00000488848 LCNL1Q6ZST4 164 aa8.2□□□□□ -1.1
USP11-209ENST00000488848 LINC00305Q7Z4B0 112 aa8.2□□□□□ -1.1
USP11-209ENST00000488848 GPR82Q96P67 336 aa8.2□□□□□ -1.1
USP11-209ENST00000488848 TXNDC17Q9BRA2 123 aa8.2□□□□□ -1.1
USP11-209ENST00000488848 SLC25A22Q9H936 323 aa8.2□□□□□ -1.1
USP11-209ENST00000488848 PFDN2Q9UHV9 154 aa8.2□□□□□ -1.1
USP11-209ENST00000488848 S4R3C0 116 aa8.2□□□□□ -1.1
USP11-209ENST00000488848 A0A1W2PPV4 95 aa8.19□□□□□ -1.1
USP11-209ENST00000488848 PPP5D1E7EU14 171 aa8.19□□□□□ -1.1
USP11-209ENST00000488848 BUB3O43684 328 aa8.19□□□□□ -1.1
USP11-209ENST00000488848 IGHV3-11P01762 117 aa8.19□□□□□ -1.1
USP11-209ENST00000488848 LYZP61626 148 aa8.19□□□□□ -1.1
USP11-209ENST00000488848 KLF5Q13887 457 aaPredicted RBP8.19□□□□□ -1.1
USP11-209ENST00000488848 FAM122CQ6P4D5 195 aa8.19□□□□□ -1.1
USP11-209ENST00000488848 UQCC3Q6UW78 93 aa8.19□□□□□ -1.1
USP11-209ENST00000488848 SFT2D1Q8WV19 159 aa8.19□□□□□ -1.1
USP11-209ENST00000488848 ZNF503Q96F45 646 aa8.19□□□□□ -1.1
USP11-209ENST00000488848 SLC25A2Q9BXI2 301 aa8.19□□□□□ -1.1
USP11-209ENST00000488848 DAZ1Q9NQZ3 744 aaKnown RBP8.19□□□□□ -1.1
USP11-209ENST00000488848 TMEM167BQ9NRX6 74 aa8.19□□□□□ -1.1
USP11-209ENST00000488848 RABAC1Q9UI14 185 aa8.19□□□□□ -1.1
USP11-209ENST00000488848 ZNF98A6NK75 572 aa8.18□□□□□ -1.1
USP11-209ENST00000488848 ZNF253O75346 499 aa8.18□□□□□ -1.1
USP11-209ENST00000488848 ORM2P19652 201 aa8.18□□□□□ -1.1
USP11-209ENST00000488848 MEOX2P50222 304 aa8.18□□□□□ -1.1
USP11-209ENST00000488848 PDE6HQ13956 83 aa8.18□□□□□ -1.1
USP11-209ENST00000488848 FAM106AQ4KMX7 169 aa8.18□□□□□ -1.1
USP11-209ENST00000488848 MORN5Q5VZ52 161 aa8.18□□□□□ -1.1
USP11-209ENST00000488848 SPATA31B1PQ5VZV4 182 aa8.18□□□□□ -1.1
USP11-209ENST00000488848 MIR17HGQ75NE6 70 aa8.18□□□□□ -1.1
USP11-209ENST00000488848 NDUFA11Q86Y39 141 aa8.18□□□□□ -1.1
USP11-209ENST00000488848 C1QL4Q86Z23 238 aa8.18□□□□□ -1.1
USP11-209ENST00000488848 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.18□□□□□ -1.1
USP11-209ENST00000488848 OR1B1Q8NGR6 318 aa8.18□□□□□ -1.1
USP11-209ENST00000488848 MARC2Q969Z3 335 aa8.18□□□□□ -1.1
USP11-209ENST00000488848 FAM210AQ96ND0 272 aa8.18□□□□□ -1.1
USP11-209ENST00000488848 TCEAL7Q9BRU2 100 aa8.18□□□□□ -1.1
USP11-209ENST00000488848 MANBALQ9NQG1 85 aa8.18□□□□□ -1.1
USP11-209ENST00000488848 UFC1Q9Y3C8 167 aa8.18□□□□□ -1.1
USP11-209ENST00000488848 TRRAPQ9Y4A5 3859 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 IGHV4OR15-8A0A075B7B6 117 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 A0A087WW49 117 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 A0A087X0K7 114 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 LINC01619G3V211 115 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 CD5P06127 495 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 ARL14EPLP0DKL9 152 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 IGLC2P0DOY2 106 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 CD28P10747 220 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 RPL7P18124 248 aaKnown RBP8.17□□□□□ -1.1
USP11-209ENST00000488848 GCHFRP30047 84 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 HOXD3P31249 432 aaPredicted RBP8.17□□□□□ -1.1
USP11-209ENST00000488848 UNQ9165/PRO28630Q6UXU0 137 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 BPIFA4PQ86YQ2 179 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 ARL6IP6Q8N6S5 226 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 FXYD5Q96DB9 178 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 UHRF2Q96PU4 802 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 METTL26Q96S19 204 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 CITED1Q99966 193 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 CITED2Q99967 270 aaPredicted RBP8.17□□□□□ -1.1
USP11-209ENST00000488848 SIGLEC8Q9NYZ4 499 aa8.17□□□□□ -1.1
USP11-209ENST00000488848 A0A1W2PRE2 83 aa8.16□□□□□ -1.1
USP11-209ENST00000488848 TMEM213A2RRL7 107 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms