RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 DAZAP1Q96EP5 407 aaKnown RBP13.11□□□□□ -0.31
MCF2L-229ENST00000488765 SLC25A33Q9BSK2 321 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 SPANXB1Q9NS25 103 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-229ENST00000488765 TMEM265A0A087WTH1 108 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 J3QT63 122 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 NCKAP5O14513 1909 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 SMAD7O15105 426 aaKnown RBP13.11□□□□□ -0.31
MCF2L-229ENST00000488765 CNIH1O95406 144 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 MOB1BQ7L9L4 216 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 ABHD17AQ96GS6 310 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 IGHV3-21A0A0B4J1V1 117 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 APELAP0DMC3 54 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 ZNF134P52741 427 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 EIF4EBP1Q13541 118 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-229ENST00000488765 ZADH2Q8N4Q0 377 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 GLMPQ8WWB7 406 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 TMSB15BA0A087X1C1 80 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 A0A1B0GXF2 115 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 SLC25A17O43808 307 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 MT-ATP8P03928 68 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 SMIM17P0DL12 118 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 ORM2P19652 201 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 CFHR2P36980 270 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 Q0VFX4 171 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 GGNQ86UU5 652 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 CIARTQ8N365 385 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-229ENST00000488765 IMMP1LQ96LU5 166 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 S1PR3Q99500 378 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 OBP2BQ9NPH6 170 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 ZNRD1Q9P1U0 126 aa13.1□□□□□ -0.31
MCF2L-229ENST00000488765 SPINK8P0C7L1 97 aa13.09□□□□□ -0.31
MCF2L-229ENST00000488765 REG1BP48304 166 aa13.09□□□□□ -0.31
MCF2L-229ENST00000488765 B5MCH6 92 aa13.09□□□□□ -0.31
MCF2L-229ENST00000488765 PLP2Q04941 152 aa13.09□□□□□ -0.31
MCF2L-229ENST00000488765 CR1LQ2VPA4 569 aa13.09□□□□□ -0.31
MCF2L-229ENST00000488765 MBNL2Q5VZF2 373 aaKnown RBP13.09□□□□□ -0.31
MCF2L-229ENST00000488765 PAXXQ9BUH6 204 aa13.09□□□□□ -0.31
MCF2L-229ENST00000488765 SLC25A2Q9BXI2 301 aa13.09□□□□□ -0.31
MCF2L-229ENST00000488765 APC2O95996 2303 aa13.08□□□□□ -0.31
MCF2L-229ENST00000488765 IGKV2D-26A0A0A0MRZ7 120 aa13.08□□□□□ -0.32
MCF2L-229ENST00000488765 A0A1B0GWB2 263 aa13.08□□□□□ -0.32
MCF2L-229ENST00000488765 PINLYPA6NC86 204 aa13.08□□□□□ -0.32
MCF2L-229ENST00000488765 SYT8Q8NBV8 401 aa13.08□□□□□ -0.32
MCF2L-229ENST00000488765 MUC6Q6W4X9 2439 aa13.08□□□□□ -0.32
MCF2L-229ENST00000488765 ZNF329Q86UD4 541 aa13.08□□□□□ -0.32
MCF2L-229ENST00000488765 RNF138Q8WVD3 245 aa13.08□□□□□ -0.32
MCF2L-229ENST00000488765 MRAP2Q96G30 205 aa13.08□□□□□ -0.32
MCF2L-229ENST00000488765 RPP21Q9H633 154 aaKnown RBP13.08□□□□□ -0.32
MCF2L-229ENST00000488765 OOEPA6NGQ2 149 aa13.07□□□□□ -0.32
MCF2L-229ENST00000488765 BOD1L2Q8IYS8 172 aa13.07□□□□□ -0.32
MCF2L-229ENST00000488765 J3QR89 54 aa13.07□□□□□ -0.32
MCF2L-229ENST00000488765 ARMS2P0C7Q2 107 aa13.07□□□□□ -0.32
MCF2L-229ENST00000488765 COL8A1P27658 744 aa13.07□□□□□ -0.32
MCF2L-229ENST00000488765 KIR2DL2P43627 348 aaPredicted RBP13.07□□□□□ -0.32
MCF2L-229ENST00000488765 ADAMTS20P59510 1910 aa13.07□□□□□ -0.32
MCF2L-229ENST00000488765 SPTAN1Q13813 2472 aaKnown RBP13.07□□□□□ -0.32
MCF2L-229ENST00000488765 SMKR1H3BMG3 65 aa13.07□□□□□ -0.32
MCF2L-229ENST00000488765 CYB561P49447 251 aa13.07□□□□□ -0.32
MCF2L-229ENST00000488765 C6orf15Q6UXA7 325 aaPredicted RBP13.07□□□□□ -0.32
MCF2L-229ENST00000488765 ZBTB34Q8NCN2 500 aa13.07□□□□□ -0.32
MCF2L-229ENST00000488765 COX7A2P2O60397 106 aa13.06□□□□□ -0.32
MCF2L-229ENST00000488765 DDB2Q92466 427 aa13.06□□□□□ -0.32
MCF2L-229ENST00000488765 CSN1S1P47710 185 aa13.06□□□□□ -0.32
MCF2L-229ENST00000488765 LINC00596Q86U02 117 aa13.06□□□□□ -0.32
MCF2L-229ENST00000488765 FAM167A-AS1Q96KT0 104 aa13.06□□□□□ -0.32
MCF2L-229ENST00000488765 C16orf97H3BN30 126 aa13.05□□□□□ -0.32
MCF2L-229ENST00000488765 SCGB1A1P11684 91 aa13.05□□□□□ -0.32
MCF2L-229ENST00000488765 RASL11AQ6T310 242 aa13.05□□□□□ -0.32
MCF2L-229ENST00000488765 PTH2Q96A98 100 aa13.05□□□□□ -0.32
MCF2L-229ENST00000488765 RTL8AQ9BWD3 113 aa13.05□□□□□ -0.32
MCF2L-229ENST00000488765 LINC00470Q9BZP3 86 aa13.05□□□□□ -0.32
MCF2L-229ENST00000488765 TGFAP01135 160 aa13.05□□□□□ -0.32
MCF2L-229ENST00000488765 FKBP2P26885 142 aaKnown RBP13.05□□□□□ -0.32
MCF2L-229ENST00000488765 TMPRSS3P57727 454 aa13.05□□□□□ -0.32
MCF2L-229ENST00000488765 HERV-K104P63124 156 aa13.05□□□□□ -0.32
MCF2L-229ENST00000488765 BOKQ9UMX3 212 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-229ENST00000488765 SVEP1Q4LDE5 3571 aa13.05□□□□□ -0.32
MCF2L-229ENST00000488765 PRR33A8MZF0 331 aa13.05□□□□□ -0.32
MCF2L-229ENST00000488765 SP1P08047 785 aa13.05□□□□□ -0.32
MCF2L-229ENST00000488765 PLGLB1Q02325 96 aa13.05□□□□□ -0.32
MCF2L-229ENST00000488765 SLC25A10Q9UBX3 287 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-229ENST00000488765 NTN3O00634 580 aaPredicted RBP13.04□□□□□ -0.32
MCF2L-229ENST00000488765 DKK1O94907 266 aa13.04□□□□□ -0.32
MCF2L-229ENST00000488765 INO80CQ6PI98 192 aaPredicted RBP13.04□□□□□ -0.32
MCF2L-229ENST00000488765 SRSF12Q8WXF0 261 aaKnown RBP13.04□□□□□ -0.32
MCF2L-229ENST00000488765 RND1Q92730 232 aa13.04□□□□□ -0.32
MCF2L-229ENST00000488765 RELNP78509 3460 aa13.04□□□□□ -0.32
MCF2L-229ENST00000488765 LINC01548A6NM66 108 aa13.04□□□□□ -0.32
MCF2L-229ENST00000488765 CT45A6P0DMU7 189 aa13.04□□□□□ -0.32
MCF2L-229ENST00000488765 CT45A5P0DMU8 189 aa13.04□□□□□ -0.32
MCF2L-229ENST00000488765 CT45A7P0DMV0 189 aa13.04□□□□□ -0.32
MCF2L-229ENST00000488765 B3GALT5-AS1P59052 145 aa13.04□□□□□ -0.32
MCF2L-229ENST00000488765 CT45A1Q5HYN5 189 aa13.04□□□□□ -0.32
MCF2L-229ENST00000488765 PRNTQ86SH4 94 aa13.04□□□□□ -0.32
MCF2L-229ENST00000488765 GTSCR1Q86UQ5 136 aa13.04□□□□□ -0.32
MCF2L-229ENST00000488765 CT45A3Q8NHU0 189 aa13.04□□□□□ -0.32
MCF2L-229ENST00000488765 ADGRG4Q8IZF6 3080 aa13.04□□□□□ -0.32
MCF2L-229ENST00000488765 PKDREJQ9NTG1 2253 aa13.03□□□□□ -0.32
MCF2L-229ENST00000488765 IGHV3OR15-7A0A075B7D8 119 aa13.03□□□□□ -0.32
MCF2L-229ENST00000488765 HSPE1P61604 102 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms