RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 MAGT1Q9H0U3 335 aa13.46□□□□□ -0.25
GGPS1-206ENST00000488594 RPRMQ9NS64 109 aa13.46□□□□□ -0.25
GGPS1-206ENST00000488594 DISC1C4P0D8 188 aa13.45□□□□□ -0.26
GGPS1-206ENST00000488594 ZNF182P17025 639 aaPredicted RBP13.45□□□□□ -0.26
GGPS1-206ENST00000488594 LYZP61626 148 aa13.45□□□□□ -0.26
GGPS1-206ENST00000488594 MRPS10P82664 201 aaKnown RBP13.45□□□□□ -0.26
GGPS1-206ENST00000488594 ZNF90Q03938 601 aa13.45□□□□□ -0.26
GGPS1-206ENST00000488594 OR8I2Q8N0Y5 310 aa13.45□□□□□ -0.26
GGPS1-206ENST00000488594 PPP1R14BQ96C90 147 aa13.45□□□□□ -0.26
GGPS1-206ENST00000488594 SLC35E1Q96K37 410 aa13.45□□□□□ -0.26
GGPS1-206ENST00000488594 TMEM208Q9BTX3 173 aa13.45□□□□□ -0.26
GGPS1-206ENST00000488594 HSPB7Q9UBY9 170 aa13.45□□□□□ -0.26
GGPS1-206ENST00000488594 IGKV1D-37A0A075B6S9 117 aa13.45□□□□□ -0.26
GGPS1-206ENST00000488594 F6UB75 175 aa13.45□□□□□ -0.26
GGPS1-206ENST00000488594 CCR6P51684 374 aa13.45□□□□□ -0.26
GGPS1-206ENST00000488594 GAMTQ14353 236 aa13.45□□□□□ -0.26
GGPS1-206ENST00000488594 FAAP20Q6NZ36 180 aa13.45□□□□□ -0.26
GGPS1-206ENST00000488594 IGF2BP2-AS1Q96M15 143 aa13.45□□□□□ -0.26
GGPS1-206ENST00000488594 DOK5Q9P104 306 aa13.45□□□□□ -0.26
GGPS1-206ENST00000488594 GPR132Q9UNW8 380 aa13.45□□□□□ -0.26
GGPS1-206ENST00000488594 KCNIP3Q9Y2W7 256 aa13.45□□□□□ -0.26
GGPS1-206ENST00000488594 TNP2Q05952 138 aa13.44□□□□□ -0.26
GGPS1-206ENST00000488594 SMCO1Q147U7 214 aa13.44□□□□□ -0.26
GGPS1-206ENST00000488594 NACAE9PAV3 2078 aa13.43□□□□□ -0.26
GGPS1-206ENST00000488594 LYRM9A8MSI8 78 aa13.43□□□□□ -0.26
GGPS1-206ENST00000488594 A8MTW9 85 aa13.43□□□□□ -0.26
GGPS1-206ENST00000488594 C16orf92Q96LL3 132 aa13.43□□□□□ -0.26
GGPS1-206ENST00000488594 PRRT1Q99946 306 aa13.43□□□□□ -0.26
GGPS1-206ENST00000488594 RBKSQ9H477 322 aa13.43□□□□□ -0.26
GGPS1-206ENST00000488594 A0A0B4J2A0 478 aa13.42□□□□□ -0.26
GGPS1-206ENST00000488594 NBDYA0A0U1RRE5 68 aa13.42□□□□□ -0.26
GGPS1-206ENST00000488594 CFDP00746 253 aaPredicted RBP13.42□□□□□ -0.26
GGPS1-206ENST00000488594 GALR1P47211 349 aa13.42□□□□□ -0.26
GGPS1-206ENST00000488594 B2MP61769 119 aa13.42□□□□□ -0.26
GGPS1-206ENST00000488594 C6orf223Q8N319 242 aa13.42□□□□□ -0.26
GGPS1-206ENST00000488594 MAPKAPK5-AS1Q8N8E1 139 aa13.42□□□□□ -0.26
GGPS1-206ENST00000488594 TRGV9Q99603 122 aa13.42□□□□□ -0.26
GGPS1-206ENST00000488594 SHPKQ9UHJ6 478 aa13.42□□□□□ -0.26
GGPS1-206ENST00000488594 AKAIN1P0CW23 69 aa13.41□□□□□ -0.26
GGPS1-206ENST00000488594 AMTNQ6UX39 209 aa13.41□□□□□ -0.26
GGPS1-206ENST00000488594 ZNRF2Q8NHG8 242 aa13.41□□□□□ -0.26
GGPS1-206ENST00000488594 INSP01308 110 aa13.4□□□□□ -0.26
GGPS1-206ENST00000488594 TSPOP30536 169 aa13.4□□□□□ -0.26
GGPS1-206ENST00000488594 OR2F1Q13607 317 aa13.4□□□□□ -0.26
GGPS1-206ENST00000488594 OR4C16Q8NGL9 310 aa13.4□□□□□ -0.26
GGPS1-206ENST00000488594 SMIM4Q8WVI0 70 aa13.4□□□□□ -0.26
GGPS1-206ENST00000488594 C20orf173Q96LM9 149 aa13.4□□□□□ -0.26
GGPS1-206ENST00000488594 SCGB3A2Q96PL1 93 aa13.4□□□□□ -0.26
GGPS1-206ENST00000488594 SLC45A2Q9UMX9 530 aa13.4□□□□□ -0.26
GGPS1-206ENST00000488594 HSPG2P98160 4391 aa13.4□□□□□ -0.27
GGPS1-206ENST00000488594 PIGBOS1A0A0B4J2F0 54 aa13.39□□□□□ -0.27
GGPS1-206ENST00000488594 DUSP14O95147 198 aaKnown RBP13.39□□□□□ -0.27
GGPS1-206ENST00000488594 S100A7P31151 101 aa13.39□□□□□ -0.27
GGPS1-206ENST00000488594 CCL18P55774 89 aa13.39□□□□□ -0.27
GGPS1-206ENST00000488594 SRPXP78539 464 aa13.39□□□□□ -0.27
GGPS1-206ENST00000488594 CTF1Q16619 201 aa13.39□□□□□ -0.27
GGPS1-206ENST00000488594 GGNBP1Q5YKI7 109 aa13.39□□□□□ -0.27
GGPS1-206ENST00000488594 OR51S1Q8NGJ8 323 aa13.39□□□□□ -0.27
GGPS1-206ENST00000488594 PRR13Q9NZ81 148 aa13.39□□□□□ -0.27
GGPS1-206ENST00000488594 ZNF705GA8MUZ8 300 aaPredicted RBP13.38□□□□□ -0.27
GGPS1-206ENST00000488594 DEFB130BP0DP73 79 aa13.38□□□□□ -0.27
GGPS1-206ENST00000488594 DEFB130AP0DP74 79 aa13.38□□□□□ -0.27
GGPS1-206ENST00000488594 AKR1C4P17516 323 aa13.38□□□□□ -0.27
GGPS1-206ENST00000488594 RAB11AP62491 216 aa13.38□□□□□ -0.27
GGPS1-206ENST00000488594 LYZL2Q7Z4W2 148 aa13.38□□□□□ -0.27
GGPS1-206ENST00000488594 OR4D5Q8NGN0 318 aa13.38□□□□□ -0.27
GGPS1-206ENST00000488594 RSG1Q9BU20 258 aa13.38□□□□□ -0.27
GGPS1-206ENST00000488594 SLC25A32Q9H2D1 315 aa13.38□□□□□ -0.27
GGPS1-206ENST00000488594 F5H768 121 aa13.37□□□□□ -0.27
GGPS1-206ENST00000488594 RGS5O15539 181 aa13.37□□□□□ -0.27
GGPS1-206ENST00000488594 NUDT3O95989 172 aa13.37□□□□□ -0.27
GGPS1-206ENST00000488594 ANXA3P12429 323 aa13.37□□□□□ -0.27
GGPS1-206ENST00000488594 CNN1P51911 297 aaKnown RBP13.37□□□□□ -0.27
GGPS1-206ENST00000488594 GPR141Q7Z602 305 aa13.37□□□□□ -0.27
GGPS1-206ENST00000488594 CLVS1Q8IUQ0 354 aaPredicted RBP13.37□□□□□ -0.27
GGPS1-206ENST00000488594 THAP8Q8NA92 274 aa13.37□□□□□ -0.27
GGPS1-206ENST00000488594 OR11H7Q8NGC8 314 aa13.37□□□□□ -0.27
GGPS1-206ENST00000488594 OR1B1Q8NGR6 318 aa13.37□□□□□ -0.27
GGPS1-206ENST00000488594 OR1S1Q8NH92 325 aa13.37□□□□□ -0.27
GGPS1-206ENST00000488594 GPR82Q96P67 336 aa13.37□□□□□ -0.27
GGPS1-206ENST00000488594 MIXL1Q9H2W2 232 aa13.37□□□□□ -0.27
GGPS1-206ENST00000488594 SLC25A22Q9H936 323 aa13.37□□□□□ -0.27
GGPS1-206ENST00000488594 SCP2D1Q9UJQ7 156 aa13.37□□□□□ -0.27
GGPS1-206ENST00000488594 ZNF98A6NK75 572 aa13.36□□□□□ -0.27
GGPS1-206ENST00000488594 CTDSPLO15194 276 aa13.36□□□□□ -0.27
GGPS1-206ENST00000488594 CRXO43186 299 aaPredicted RBP13.36□□□□□ -0.27
GGPS1-206ENST00000488594 ATP5G1P05496 136 aa13.36□□□□□ -0.27
GGPS1-206ENST00000488594 ATP5G3P48201 142 aa13.36□□□□□ -0.27
GGPS1-206ENST00000488594 SPINK13Q1W4C9 94 aa13.36□□□□□ -0.27
GGPS1-206ENST00000488594 RABL2AQ9UBK7 228 aaPredicted RBP13.36□□□□□ -0.27
GGPS1-206ENST00000488594 RABL2BQ9UNT1 228 aa13.36□□□□□ -0.27
GGPS1-206ENST00000488594 IGKV1OR2-108A0A075B7D4 117 aa13.35□□□□□ -0.27
GGPS1-206ENST00000488594 M0R2Z0 102 aa13.35□□□□□ -0.27
GGPS1-206ENST00000488594 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.35□□□□□ -0.27
GGPS1-206ENST00000488594 Q8N1X5 172 aa13.35□□□□□ -0.27
GGPS1-206ENST00000488594 NAA50Q9GZZ1 169 aaKnown RBP13.35□□□□□ -0.27
GGPS1-206ENST00000488594 CBY3A6NI87 242 aa13.34□□□□□ -0.27
GGPS1-206ENST00000488594 C17orf77Q96MU5 243 aa13.34□□□□□ -0.27
GGPS1-206ENST00000488594 DUXBA0A1W2PPF3 345 aa13.33□□□□□ -0.27
GGPS1-206ENST00000488594 PRM2P04554 102 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms