RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-219ENST00000488535 KALRNO60229 2985 aa10.64□□□□□ -0.71
ABCA2-219ENST00000488535 TNRC6AQ8NDV7 1962 aaKnown RBP10.64□□□□□ -0.71
ABCA2-219ENST00000488535 ABCA4P78363 2273 aa10.64□□□□□ -0.71
ABCA2-219ENST00000488535 DUX4L9Q6RFH8 374 aaPredicted RBP10.64□□□□□ -0.71
ABCA2-219ENST00000488535 WDR82Q6UXN9 313 aa10.64□□□□□ -0.71
ABCA2-219ENST00000488535 SPRY3O43610 288 aa10.64□□□□□ -0.71
ABCA2-219ENST00000488535 FABP2P12104 132 aa10.64□□□□□ -0.71
ABCA2-219ENST00000488535 PRB3Q04118 309 aaPredicted RBP10.64□□□□□ -0.71
ABCA2-219ENST00000488535 TMEM249Q2WGJ8 235 aa10.64□□□□□ -0.71
ABCA2-219ENST00000488535 SRSF12Q8WXF0 261 aaKnown RBP10.64□□□□□ -0.71
ABCA2-219ENST00000488535 SLC25A2Q9BXI2 301 aa10.64□□□□□ -0.71
ABCA2-219ENST00000488535 RPP21Q9H633 154 aaKnown RBP10.64□□□□□ -0.71
ABCA2-219ENST00000488535 FAM120AOSQ5T036 256 aa10.63□□□□□ -0.71
ABCA2-219ENST00000488535 PCP2Q8IVA1 136 aa10.63□□□□□ -0.71
ABCA2-219ENST00000488535 GTSF1Q8WW33 167 aa10.63□□□□□ -0.71
ABCA2-219ENST00000488535 SPRR3Q9UBC9 169 aa10.63□□□□□ -0.71
ABCA2-219ENST00000488535 TACC2O95359 2948 aa10.63□□□□□ -0.71
ABCA2-219ENST00000488535 G3V4G9 280 aa10.63□□□□□ -0.71
ABCA2-219ENST00000488535 ADH4P08319 380 aa10.63□□□□□ -0.71
ABCA2-219ENST00000488535 C16orf54Q6UWD8 224 aa10.63□□□□□ -0.71
ABCA2-219ENST00000488535 MBD6Q96DN6 1003 aa10.63□□□□□ -0.71
ABCA2-219ENST00000488535 TSSC4Q9Y5U2 329 aaPredicted RBP10.63□□□□□ -0.71
ABCA2-219ENST00000488535 TEX50A0A1B0GTY4 177 aa10.63□□□□□ -0.71
ABCA2-219ENST00000488535 A1L4Q6 167 aa10.63□□□□□ -0.71
ABCA2-219ENST00000488535 EIF4EBP1Q13541 118 aaPredicted RBP10.63□□□□□ -0.71
ABCA2-219ENST00000488535 ZNF329Q86UD4 541 aa10.63□□□□□ -0.71
ABCA2-219ENST00000488535 C1RLQ9NZP8 487 aa10.63□□□□□ -0.71
ABCA2-219ENST00000488535 CSMD1Q96PZ7 3565 aa10.62□□□□□ -0.71
ABCA2-219ENST00000488535 PPIAL4EA0A075B759 164 aa10.62□□□□□ -0.71
ABCA2-219ENST00000488535 ENSAO43768 121 aaKnown RBP10.62□□□□□ -0.71
ABCA2-219ENST00000488535 PPIAL4FP0DN26 164 aa10.62□□□□□ -0.71
ABCA2-219ENST00000488535 MOGAT3Q86VF5 341 aa10.62□□□□□ -0.71
ABCA2-219ENST00000488535 ZGRF1Q86YA3 2104 aa10.62□□□□□ -0.71
ABCA2-219ENST00000488535 OR1L4Q8NGR5 311 aa10.62□□□□□ -0.71
ABCA2-219ENST00000488535 H1FXQ92522 213 aaKnown RBP10.62□□□□□ -0.71
ABCA2-219ENST00000488535 SLC25A10Q9UBX3 287 aaPredicted RBP10.62□□□□□ -0.71
ABCA2-219ENST00000488535 DSCAML1Q8TD84 2053 aa10.62□□□□□ -0.71
ABCA2-219ENST00000488535 IFI27P40305 119 aaPredicted RBP10.61□□□□□ -0.71
ABCA2-219ENST00000488535 LOXL1Q08397 574 aaPredicted RBP10.61□□□□□ -0.71
ABCA2-219ENST00000488535 TCF15Q12870 199 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 PSG3Q16557 428 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 C2orf91Q6ZV80 131 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 GOLT1AQ6ZVE7 132 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 IFI27L2Q9H2X8 130 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 CALYQ9NYX4 217 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 SPG11Q96JI7 2443 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 IGHV3-72A0A0B4J1Y9 119 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 C9orf118A6NHY6 69 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 SRRM4A7MD48 611 aaKnown RBP10.61□□□□□ -0.71
ABCA2-219ENST00000488535 COX8AP10176 69 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 CSN1S1P47710 185 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 CT45A1Q5HYN5 189 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 MDS2Q8NDY4 140 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 CT45A3Q8NHU0 189 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 SH3BGRL2Q9UJC5 107 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 NBEAP1P0C6P0 100 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 FAM87AP0C7U9 286 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 CFHR2P36980 270 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 AMTNQ6UX39 209 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 PIP4P1Q86T03 277 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 EXOC3-AS1Q8N2X6 119 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 HARBI1Q96MB7 349 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 NHP2Q9NX24 153 aaKnown RBP10.61□□□□□ -0.71
ABCA2-219ENST00000488535 SSUH2Q9Y2M2 353 aa10.61□□□□□ -0.71
ABCA2-219ENST00000488535 ACACBO00763 2458 aa10.6□□□□□ -0.71
ABCA2-219ENST00000488535 SMKR1H3BMG3 65 aa10.6□□□□□ -0.71
ABCA2-219ENST00000488535 K7EP34 96 aa10.6□□□□□ -0.71
ABCA2-219ENST00000488535 ARMS2P0C7Q2 107 aa10.6□□□□□ -0.71
ABCA2-219ENST00000488535 KLF5Q13887 457 aaPredicted RBP10.6□□□□□ -0.71
ABCA2-219ENST00000488535 SH2D6Q7Z4S9 175 aa10.6□□□□□ -0.71
ABCA2-219ENST00000488535 ERHP84090 104 aaKnown RBP10.6□□□□□ -0.71
ABCA2-219ENST00000488535 RBPJQ06330 500 aa10.6□□□□□ -0.71
ABCA2-219ENST00000488535 SAMD5Q5TGI4 173 aa10.6□□□□□ -0.71
ABCA2-219ENST00000488535 PET117Q6UWS5 81 aa10.6□□□□□ -0.71
ABCA2-219ENST00000488535 VSTM2AQ8TAG5 236 aa10.6□□□□□ -0.71
ABCA2-219ENST00000488535 CXXC4Q9H2H0 198 aa10.6□□□□□ -0.71
ABCA2-219ENST00000488535 NCOR1P1Q9H4R4 102 aa10.6□□□□□ -0.71
ABCA2-219ENST00000488535 EPDR1Q9UM22 224 aa10.6□□□□□ -0.71
ABCA2-219ENST00000488535 C15orf65H3BRN8 121 aa10.6□□□□□ -0.71
ABCA2-219ENST00000488535 FCGR2BP31994 310 aaPredicted RBP10.6□□□□□ -0.71
ABCA2-219ENST00000488535 FAM162BQ5T6X4 162 aa10.6□□□□□ -0.71
ABCA2-219ENST00000488535 LINC00470Q9BZP3 86 aa10.6□□□□□ -0.71
ABCA2-219ENST00000488535 SAA1P0DJI8 122 aaPredicted RBP10.59□□□□□ -0.71
ABCA2-219ENST00000488535 LGALS7P47929 136 aa10.59□□□□□ -0.71
ABCA2-219ENST00000488535 WDR31Q8NA23 367 aa10.59□□□□□ -0.71
ABCA2-219ENST00000488535 PRSS33Q8NF86 280 aa10.59□□□□□ -0.71
ABCA2-219ENST00000488535 GPR82Q96P67 336 aa10.59□□□□□ -0.71
ABCA2-219ENST00000488535 SIGMAR1Q99720 223 aa10.59□□□□□ -0.71
ABCA2-219ENST00000488535 CHTOPQ9Y3Y2 248 aaKnown RBP10.59□□□□□ -0.71
ABCA2-219ENST00000488535 E7EUB6 86 aa10.59□□□□□ -0.71
ABCA2-219ENST00000488535 PPIFP30405 207 aaKnown RBP10.59□□□□□ -0.71
ABCA2-219ENST00000488535 TMPRSS3P57727 454 aa10.59□□□□□ -0.71
ABCA2-219ENST00000488535 SEC11AP67812 179 aa10.59□□□□□ -0.71
ABCA2-219ENST00000488535 SPRNQ5BIV9 151 aa10.59□□□□□ -0.71
ABCA2-219ENST00000488535 INO80CQ6PI98 192 aaPredicted RBP10.59□□□□□ -0.71
ABCA2-219ENST00000488535 RBPMS2Q6ZRY4 209 aaKnown RBP10.59□□□□□ -0.71
ABCA2-219ENST00000488535 C11orf53Q8IXP5 236 aa10.59□□□□□ -0.71
ABCA2-219ENST00000488535 ZNF257Q9Y2Q1 563 aa10.59□□□□□ -0.71
ABCA2-219ENST00000488535 LYZP61626 148 aa10.58□□□□□ -0.72
ABCA2-219ENST00000488535 ETDBQ3ZM63 59 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms