RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 ZNF709Q8N972 641 aa11.86□□□□□ -0.51
C9orf3-219ENST00000488186 MRAPQ8TCY5 172 aa11.86□□□□□ -0.51
C9orf3-219ENST00000488186 SCGB1C1Q8TD33 95 aa11.86□□□□□ -0.51
C9orf3-219ENST00000488186 CHAC2Q8WUX2 184 aa11.86□□□□□ -0.51
C9orf3-219ENST00000488186 LSM4Q9Y4Z0 139 aaKnown RBP11.86□□□□□ -0.51
C9orf3-219ENST00000488186 HELTA6NFD8 242 aa11.85□□□□□ -0.51
C9orf3-219ENST00000488186 ZNF785A8K8V0 405 aa11.85□□□□□ -0.51
C9orf3-219ENST00000488186 TSPAN4O14817 238 aa11.85□□□□□ -0.51
C9orf3-219ENST00000488186 MPDU1O75352 247 aa11.85□□□□□ -0.51
C9orf3-219ENST00000488186 AP2S1P53680 142 aaPredicted RBP11.85□□□□□ -0.51
C9orf3-219ENST00000488186 MGST2Q99735 147 aa11.85□□□□□ -0.51
C9orf3-219ENST00000488186 ATP5SQ99766 215 aa11.85□□□□□ -0.51
C9orf3-219ENST00000488186 SPAG8Q99932 426 aaPredicted RBP11.85□□□□□ -0.51
C9orf3-219ENST00000488186 ARL6Q9H0F7 186 aa11.85□□□□□ -0.51
C9orf3-219ENST00000488186 DOK5Q9P104 306 aa11.85□□□□□ -0.51
C9orf3-219ENST00000488186 HIGD1AQ9Y241 93 aa11.85□□□□□ -0.51
C9orf3-219ENST00000488186 hCG_2014768A0A024R1R8 64 aa11.84□□□□□ -0.51
C9orf3-219ENST00000488186 OR4C46A6NHA9 309 aa11.84□□□□□ -0.51
C9orf3-219ENST00000488186 TFPI2P48307 235 aa11.84□□□□□ -0.51
C9orf3-219ENST00000488186 CD81P60033 236 aa11.84□□□□□ -0.51
C9orf3-219ENST00000488186 PXDC1Q5TGL8 231 aa11.84□□□□□ -0.51
C9orf3-219ENST00000488186 C16orf54Q6UWD8 224 aa11.84□□□□□ -0.51
C9orf3-219ENST00000488186 WFDC3Q8IUB2 231 aa11.84□□□□□ -0.51
C9orf3-219ENST00000488186 GBGT1Q8N5D6 347 aa11.84□□□□□ -0.51
C9orf3-219ENST00000488186 FBXL17Q9UF56 701 aa11.84□□□□□ -0.51
C9orf3-219ENST00000488186 SLC45A2Q9UMX9 530 aa11.84□□□□□ -0.51
C9orf3-219ENST00000488186 U3KQE9 123 aa11.84□□□□□ -0.51
C9orf3-219ENST00000488186 C17orf112F2Z3M2 114 aa11.83□□□□□ -0.52
C9orf3-219ENST00000488186 BUB3O43684 328 aa11.83□□□□□ -0.52
C9orf3-219ENST00000488186 COX7A2P2O60397 106 aa11.83□□□□□ -0.52
C9orf3-219ENST00000488186 OR8I2Q8N0Y5 310 aa11.83□□□□□ -0.52
C9orf3-219ENST00000488186 NEURL2Q9BR09 285 aa11.83□□□□□ -0.52
C9orf3-219ENST00000488186 GGTLC1Q9BX51 225 aa11.83□□□□□ -0.52
C9orf3-219ENST00000488186 SLC25A22Q9H936 323 aa11.83□□□□□ -0.52
C9orf3-219ENST00000488186 RNF24Q9Y225 148 aa11.83□□□□□ -0.52
C9orf3-219ENST00000488186 SMLR1H3BR10 107 aa11.82□□□□□ -0.52
C9orf3-219ENST00000488186 K7EIL1 84 aa11.82□□□□□ -0.52
C9orf3-219ENST00000488186 RPL29P47914 159 aaKnown RBP11.82□□□□□ -0.52
C9orf3-219ENST00000488186 B2MP61769 119 aa11.82□□□□□ -0.52
C9orf3-219ENST00000488186 C1orf194Q5T5A4 169 aa11.82□□□□□ -0.52
C9orf3-219ENST00000488186 MIC13Q5XKP0 118 aa11.82□□□□□ -0.52
C9orf3-219ENST00000488186 SIGLEC15Q6ZMC9 328 aa11.82□□□□□ -0.52
C9orf3-219ENST00000488186 STPG3Q8N7X2 389 aa11.82□□□□□ -0.52
C9orf3-219ENST00000488186 STXBP6Q8NFX7 210 aa11.82□□□□□ -0.52
C9orf3-219ENST00000488186 OR1L4Q8NGR5 311 aa11.82□□□□□ -0.52
C9orf3-219ENST00000488186 AQP10Q96PS8 301 aa11.82□□□□□ -0.52
C9orf3-219ENST00000488186 NPCDR1Q9BY65 106 aa11.82□□□□□ -0.52
C9orf3-219ENST00000488186 WDR61Q9GZS3 305 aaKnown RBP11.82□□□□□ -0.52
C9orf3-219ENST00000488186 KCNIP2Q9NS61 270 aa11.82□□□□□ -0.52
C9orf3-219ENST00000488186 SMAD5-AS1Q9Y6J3 95 aa11.82□□□□□ -0.52
C9orf3-219ENST00000488186 ELOA3CA0A087WX78 387 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-219ENST00000488186 ZNF98A6NK75 572 aa11.81□□□□□ -0.52
C9orf3-219ENST00000488186 CMC4P56277 68 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-219ENST00000488186 PLP1P60201 277 aa11.81□□□□□ -0.52
C9orf3-219ENST00000488186 OPCMLQ14982 345 aa11.81□□□□□ -0.52
C9orf3-219ENST00000488186 FAM90A2PQ658T7 463 aa11.81□□□□□ -0.52
C9orf3-219ENST00000488186 ARV1Q9H2C2 271 aa11.81□□□□□ -0.52
C9orf3-219ENST00000488186 MS4A6AQ9H2W1 248 aa11.81□□□□□ -0.52
C9orf3-219ENST00000488186 TUBA4BQ9H853 241 aa11.81□□□□□ -0.52
C9orf3-219ENST00000488186 DNAJC4Q9NNZ3 241 aa11.81□□□□□ -0.52
C9orf3-219ENST00000488186 SLC39A9Q9NUM3 307 aa11.81□□□□□ -0.52
C9orf3-219ENST00000488186 TNFSF18Q9UNG2 199 aa11.81□□□□□ -0.52
C9orf3-219ENST00000488186 PXMP4Q9Y6I8 212 aa11.81□□□□□ -0.52
C9orf3-219ENST00000488186 ARPC5O15511 151 aa11.8□□□□□ -0.52
C9orf3-219ENST00000488186 CD7P09564 240 aa11.8□□□□□ -0.52
C9orf3-219ENST00000488186 GALR1P47211 349 aa11.8□□□□□ -0.52
C9orf3-219ENST00000488186 ZNF266Q14584 549 aa11.8□□□□□ -0.52
C9orf3-219ENST00000488186 C10orf113Q5VZT2 155 aa11.8□□□□□ -0.52
C9orf3-219ENST00000488186 GLMPQ8WWB7 406 aa11.8□□□□□ -0.52
C9orf3-219ENST00000488186 PFDN5Q99471 154 aa11.8□□□□□ -0.52
C9orf3-219ENST00000488186 SLC25A39Q9BZJ4 359 aaPredicted RBP11.8□□□□□ -0.52
C9orf3-219ENST00000488186 OR11H12B2RN74 326 aa11.79□□□□□ -0.52
C9orf3-219ENST00000488186 PRR20EP86478 221 aa11.79□□□□□ -0.52
C9orf3-219ENST00000488186 PRR20CP86479 221 aa11.79□□□□□ -0.52
C9orf3-219ENST00000488186 PRR20DP86480 221 aa11.79□□□□□ -0.52
C9orf3-219ENST00000488186 PRR20BP86481 221 aa11.79□□□□□ -0.52
C9orf3-219ENST00000488186 PRR20AP86496 221 aa11.79□□□□□ -0.52
C9orf3-219ENST00000488186 LINC00305Q7Z4B0 112 aa11.79□□□□□ -0.52
C9orf3-219ENST00000488186 GPR82Q96P67 336 aa11.79□□□□□ -0.52
C9orf3-219ENST00000488186 UHRF2Q96PU4 802 aa11.79□□□□□ -0.52
C9orf3-219ENST00000488186 MFFQ9GZY8 342 aa11.79□□□□□ -0.52
C9orf3-219ENST00000488186 WFDC1Q9HC57 220 aa11.79□□□□□ -0.52
C9orf3-219ENST00000488186 TGP01266 2768 aa11.79□□□□□ -0.52
C9orf3-219ENST00000488186 BORCS7-ASMTA0A0B4J1R7 106 aa11.78□□□□□ -0.52
C9orf3-219ENST00000488186 TRAV2A0A0B4J234 112 aa11.78□□□□□ -0.52
C9orf3-219ENST00000488186 LEMD1Q68G75 181 aa11.78□□□□□ -0.52
C9orf3-219ENST00000488186 PATE2Q6UY27 113 aa11.78□□□□□ -0.52
C9orf3-219ENST00000488186 Q8N1Y9 231 aa11.78□□□□□ -0.52
C9orf3-219ENST00000488186 SHANK2-AS3Q9BTD1 123 aa11.78□□□□□ -0.52
C9orf3-219ENST00000488186 UBQLN2Q9UHD9 624 aa11.78□□□□□ -0.52
C9orf3-219ENST00000488186 H3BRN7 92 aa11.77□□□□□ -0.53
C9orf3-219ENST00000488186 ATF4P18848 351 aaPredicted RBP11.77□□□□□ -0.53
C9orf3-219ENST00000488186 AKAP14Q86UN6 197 aa11.77□□□□□ -0.53
C9orf3-219ENST00000488186 DEFB125Q8N687 156 aa11.77□□□□□ -0.53
C9orf3-219ENST00000488186 GATAD1Q8WUU5 269 aa11.77□□□□□ -0.53
C9orf3-219ENST00000488186 SCRT1Q9BWW7 348 aa11.77□□□□□ -0.53
C9orf3-219ENST00000488186 PARD6GQ9BYG4 376 aaPredicted RBP11.77□□□□□ -0.53
C9orf3-219ENST00000488186 SLC25A32Q9H2D1 315 aa11.77□□□□□ -0.53
C9orf3-219ENST00000488186 NRN1Q9NPD7 142 aa11.77□□□□□ -0.53
C9orf3-219ENST00000488186 RNF222A6NCQ9 220 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms