RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 KRTAP24-1Q3LI83 254 aa8.13□□□□□ -1.11
HLA-DMB-261ENST00000487996 FAM74A1Q5RGS3 127 aa8.13□□□□□ -1.11
HLA-DMB-261ENST00000487996 TOMM20LQ6UXN7 152 aa8.13□□□□□ -1.11
HLA-DMB-261ENST00000487996 C11orf44Q8N8P7 122 aa8.13□□□□□ -1.11
HLA-DMB-261ENST00000487996 SAT2Q96F10 170 aaPredicted RBP8.13□□□□□ -1.11
HLA-DMB-261ENST00000487996 RPRMQ9NS64 109 aa8.13□□□□□ -1.11
HLA-DMB-261ENST00000487996 RABAC1Q9UI14 185 aa8.13□□□□□ -1.11
HLA-DMB-261ENST00000487996 SEC14L6B5MCN3 397 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 BMI1P35226 326 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 CDC34P49427 236 aaPredicted RBP8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 FAM78BQ5VT40 261 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 OR11H1Q8NG94 326 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 OR1N2Q8NGR9 330 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 FAM213BQ8TBF2 198 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 TMEM190Q8WZ59 177 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 METTL26Q96S19 204 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 UFC1Q9Y3C8 167 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 RFNGQ9Y644 331 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 IGHV4OR15-8A0A075B7B6 117 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 A0A087WW49 117 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 IGHV3-35A0A0C4DH35 117 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 CTXND1A0A1B0GTU2 59 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 NPPCP23582 126 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 HOXD3P31249 432 aaPredicted RBP8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 FAM122CQ6P4D5 195 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 C8orf86Q6ZUL3 223 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 LINC00305Q7Z4B0 112 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 C1QL4Q86Z23 238 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 RPP25LQ8N5L8 163 aaKnown RBP8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 STXBP6Q8NFX7 210 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 C20orf24Q9BUV8 137 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 ZFAND3Q9H8U3 227 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 DAZ1Q9NQZ3 744 aaKnown RBP8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 MRPL27Q9P0M9 148 aaKnown RBP8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 DOK5Q9P104 306 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 FUT9Q9Y231 359 aa8.12□□□□□ -1.11
HLA-DMB-261ENST00000487996 A0A1W2PRX2 142 aa8.11□□□□□ -1.11
HLA-DMB-261ENST00000487996 ZNF320A2RRD8 509 aa8.11□□□□□ -1.11
HLA-DMB-261ENST00000487996 K7EMT4 169 aa8.11□□□□□ -1.11
HLA-DMB-261ENST00000487996 CCL24O00175 119 aa8.11□□□□□ -1.11
HLA-DMB-261ENST00000487996 LGALS9O00182 355 aa8.11□□□□□ -1.11
HLA-DMB-261ENST00000487996 HBE1P02100 147 aa8.11□□□□□ -1.11
HLA-DMB-261ENST00000487996 H2AFB1P0C5Y9 115 aa8.11□□□□□ -1.11
HLA-DMB-261ENST00000487996 USF2Q15853 346 aaPredicted RBP8.11□□□□□ -1.11
HLA-DMB-261ENST00000487996 KHDC3LQ587J8 217 aa8.11□□□□□ -1.11
HLA-DMB-261ENST00000487996 GCSAMLQ5JQS6 135 aa8.11□□□□□ -1.11
HLA-DMB-261ENST00000487996 LCE2CQ5TA81 110 aa8.11□□□□□ -1.11
HLA-DMB-261ENST00000487996 REC114Q7Z4M0 266 aa8.11□□□□□ -1.11
HLA-DMB-261ENST00000487996 TMEM37Q8WXS4 190 aa8.11□□□□□ -1.11
HLA-DMB-261ENST00000487996 RCC1LQ96I51 464 aaKnown RBP8.11□□□□□ -1.11
HLA-DMB-261ENST00000487996 VSIRQ9H7M9 311 aa8.11□□□□□ -1.11
HLA-DMB-261ENST00000487996 TECRQ9NZ01 308 aaKnown RBP8.11□□□□□ -1.11
HLA-DMB-261ENST00000487996 A0A1W2PS18 150 aa8.1□□□□□ -1.11
HLA-DMB-261ENST00000487996 FHL3Q13643 280 aa8.1□□□□□ -1.11
HLA-DMB-261ENST00000487996 PQLC2Q6ZP29 291 aa8.1□□□□□ -1.11
HLA-DMB-261ENST00000487996 C18orf65Q6ZTR6 163 aa8.1□□□□□ -1.11
HLA-DMB-261ENST00000487996 RAB24Q969Q5 203 aa8.1□□□□□ -1.11
HLA-DMB-261ENST00000487996 GRAMD2BQ96HH9 432 aa8.1□□□□□ -1.11
HLA-DMB-261ENST00000487996 CITED1Q99966 193 aa8.1□□□□□ -1.11
HLA-DMB-261ENST00000487996 SHANK2-AS3Q9BTD1 123 aa8.1□□□□□ -1.11
HLA-DMB-261ENST00000487996 SLC25A39Q9BZJ4 359 aaPredicted RBP8.1□□□□□ -1.11
HLA-DMB-261ENST00000487996 TMEM231Q9H6L2 316 aa8.1□□□□□ -1.11
HLA-DMB-261ENST00000487996 SLC25A22Q9H936 323 aa8.1□□□□□ -1.11
HLA-DMB-261ENST00000487996 SEPSECSQ9HD40 501 aaKnown RBP8.1□□□□□ -1.11
HLA-DMB-261ENST00000487996 PEMTQ9UBM1 199 aa8.1□□□□□ -1.11
HLA-DMB-261ENST00000487996 FBN3Q75N90 2809 aa8.1□□□□□ -1.11
HLA-DMB-261ENST00000487996 COL6A5A8TX70 2615 aa8.1□□□□□ -1.11
HLA-DMB-261ENST00000487996 MAP1LC3B2A6NCE7 125 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 A8MWP6 167 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 C8orf88P0DMB2 117 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 S100A1P23297 94 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 CRYBB3P26998 211 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 MYCNOSP40205 109 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 FHITP49789 147 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 KLF5Q13887 457 aaPredicted RBP8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 DEFB136Q30KP8 78 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 NSUN5P1Q3KNT7 163 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 C1orf194Q5T5A4 169 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 PATE2Q6UY27 113 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 OR4F17Q8NGA8 305 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 SFT2D1Q8WV19 159 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 MBD3L1Q8WWY6 194 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 MARC2Q969Z3 335 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 GPR82Q96P67 336 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 UHRF2Q96PU4 802 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 OR4F4Q96R69 305 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 MAP1LC3BQ9GZQ8 125 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 TRAV1-1A0A0B4J248 108 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 H3BRN7 92 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 M0QZ24 198 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 CXorf1O96002 111 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 SYNJ2BPP57105 145 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 CLLU1Q5K131 121 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 UNQ9165/PRO28630Q6UXU0 137 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 C12orf54Q6X4T0 127 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 C3orf56Q8N813 242 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 RAX2Q96IS3 184 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 ELOVL1Q9BW60 279 aa8.09□□□□□ -1.11
HLA-DMB-261ENST00000487996 FBN1P35555 2871 aaKnown RBP8.08□□□□□ -1.12
HLA-DMB-261ENST00000487996 WNK1Q9H4A3 2382 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms