RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 KMT2AQ03164 3969 aa8.99□□□□□ -0.97
SDC3-204ENST00000487984 FXYD6-FXYD2A0A087WZ82 144 aa8.99□□□□□ -0.97
SDC3-204ENST00000487984 HMSDA8MTL9 139 aa8.99□□□□□ -0.97
SDC3-204ENST00000487984 K7EPK0 472 aa8.99□□□□□ -0.97
SDC3-204ENST00000487984 K7EQG2 157 aa8.99□□□□□ -0.97
SDC3-204ENST00000487984 SYNGR2O43760 224 aa8.99□□□□□ -0.97
SDC3-204ENST00000487984 DEDDO75618 318 aa8.99□□□□□ -0.97
SDC3-204ENST00000487984 NPY1RP25929 384 aa8.99□□□□□ -0.97
SDC3-204ENST00000487984 OR10J1P30954 320 aa8.99□□□□□ -0.97
SDC3-204ENST00000487984 EIF2B2P49770 351 aaKnown RBP8.99□□□□□ -0.97
SDC3-204ENST00000487984 RPP30P78346 268 aaKnown RBP8.99□□□□□ -0.97
SDC3-204ENST00000487984 ZNF546Q86UE3 836 aa8.99□□□□□ -0.97
SDC3-204ENST00000487984 STHQ8IWL8 128 aa8.99□□□□□ -0.97
SDC3-204ENST00000487984 PHLDA1Q8WV24 401 aaPredicted RBP8.99□□□□□ -0.97
SDC3-204ENST00000487984 NARS2Q96I59 477 aaKnown RBP8.99□□□□□ -0.97
SDC3-204ENST00000487984 C11orf68Q9H3H3 251 aaKnown RBP8.99□□□□□ -0.97
SDC3-204ENST00000487984 HSPB7Q9UBY9 170 aa8.99□□□□□ -0.97
SDC3-204ENST00000487984 KLK5Q9Y337 293 aaPredicted RBP8.99□□□□□ -0.97
SDC3-204ENST00000487984 U3KQE9 123 aa8.99□□□□□ -0.97
SDC3-204ENST00000487984 SMLR1H3BR10 107 aa8.98□□□□□ -0.97
SDC3-204ENST00000487984 ZNF688P0C7X2 276 aa8.98□□□□□ -0.97
SDC3-204ENST00000487984 TAS2R30P59541 319 aa8.98□□□□□ -0.97
SDC3-204ENST00000487984 YPEL3P61236 119 aaPredicted RBP8.98□□□□□ -0.97
SDC3-204ENST00000487984 CD300CQ08708 224 aa8.98□□□□□ -0.97
SDC3-204ENST00000487984 DCANP1Q8TF63 244 aa8.98□□□□□ -0.97
SDC3-204ENST00000487984 Q8WTZ3 238 aa8.98□□□□□ -0.97
SDC3-204ENST00000487984 NPIPB3Q92617 1050 aa8.98□□□□□ -0.97
SDC3-204ENST00000487984 GRAMD2BQ96HH9 432 aa8.98□□□□□ -0.97
SDC3-204ENST00000487984 SLC25A31Q9H0C2 315 aa8.98□□□□□ -0.97
SDC3-204ENST00000487984 MBD2Q9UBB5 411 aa8.98□□□□□ -0.97
SDC3-204ENST00000487984 RCL1Q9Y2P8 373 aaKnown RBP8.98□□□□□ -0.97
SDC3-204ENST00000487984 KNCNA6PVL3 124 aa8.97□□□□□ -0.97
SDC3-204ENST00000487984 BOLA2-SMG1P6H3BVE0 249 aa8.97□□□□□ -0.97
SDC3-204ENST00000487984 DEFB4AO15263 64 aa8.97□□□□□ -0.97
SDC3-204ENST00000487984 SSSCA1O60232 199 aa8.97□□□□□ -0.97
SDC3-204ENST00000487984 GIG44P09565 113 aaPredicted RBP8.97□□□□□ -0.97
SDC3-204ENST00000487984 NANOS2P60321 138 aaKnown RBP8.97□□□□□ -0.97
SDC3-204ENST00000487984 POLR2GP62487 172 aaKnown RBP eCLIP8.97□□□□□ -0.97
SDC3-204ENST00000487984 USF2Q15853 346 aaPredicted RBP8.97□□□□□ -0.97
SDC3-204ENST00000487984 ETFRF1Q6IPR1 90 aa8.97□□□□□ -0.97
SDC3-204ENST00000487984 TRPT1Q86TN4 253 aaKnown RBP8.97□□□□□ -0.97
SDC3-204ENST00000487984 DTD1Q8TEA8 209 aa8.97□□□□□ -0.97
SDC3-204ENST00000487984 GLMPQ8WWB7 406 aa8.97□□□□□ -0.97
SDC3-204ENST00000487984 ACY3Q96HD9 319 aa8.97□□□□□ -0.97
SDC3-204ENST00000487984 SMIM8Q96KF7 97 aa8.97□□□□□ -0.97
SDC3-204ENST00000487984 MAGT1Q9H0U3 335 aa8.97□□□□□ -0.97
SDC3-204ENST00000487984 A0A0D9SG52 128 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 HELTA6NFD8 242 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 ARPC5O15511 151 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 TSC22D2O75157 780 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 IFNA10P01566 189 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 IL4P05112 153 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 CAV2P51636 162 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 ATP5IP56385 69 aaPredicted RBP8.96□□□□□ -0.98
SDC3-204ENST00000487984 OR2F1Q13607 317 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 Q5BKY6 102 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 C16orf54Q6UWD8 224 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 ACOT7LQ6ZUV0 252 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 C11orf45Q8TAV5 145 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 RNF126Q9BV68 326 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 MFFQ9GZY8 342 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 RBKSQ9H477 322 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 PSENENQ9NZ42 101 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 FBXL17Q9UF56 701 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 TNFSF18Q9UNG2 199 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 U3KQ87 197 aa8.96□□□□□ -0.98
SDC3-204ENST00000487984 G3V3Q6 166 aa8.95□□□□□ -0.98
SDC3-204ENST00000487984 H0YIZ8 118 aa8.95□□□□□ -0.98
SDC3-204ENST00000487984 TOMM40O96008 361 aa8.95□□□□□ -0.98
SDC3-204ENST00000487984 RD3LP0DJH9 198 aa8.95□□□□□ -0.98
SDC3-204ENST00000487984 RPL12P30050 165 aaKnown RBP8.95□□□□□ -0.98
SDC3-204ENST00000487984 ZNF345Q14585 488 aa8.95□□□□□ -0.98
SDC3-204ENST00000487984 ACTL10Q5JWF8 245 aa8.95□□□□□ -0.98
SDC3-204ENST00000487984 STX12Q86Y82 276 aa8.95□□□□□ -0.98
SDC3-204ENST00000487984 Q8NAQ8 132 aa8.95□□□□□ -0.98
SDC3-204ENST00000487984 LYRM2Q9NU23 88 aaPredicted RBP8.95□□□□□ -0.98
SDC3-204ENST00000487984 OR5AC2Q9NZP5 309 aa8.95□□□□□ -0.98
SDC3-204ENST00000487984 STRAPQ9Y3F4 350 aaKnown RBP8.95□□□□□ -0.98
SDC3-204ENST00000487984 SPP1P10451 314 aa8.94□□□□□ -0.98
SDC3-204ENST00000487984 IAPPP10997 89 aa8.94□□□□□ -0.98
SDC3-204ENST00000487984 PSG1P11464 419 aa8.94□□□□□ -0.98
SDC3-204ENST00000487984 AP2S1P53680 142 aaPredicted RBP8.94□□□□□ -0.98
SDC3-204ENST00000487984 BAXQ07812 192 aa8.94□□□□□ -0.98
SDC3-204ENST00000487984 TMEM41BQ5BJD5 291 aa8.94□□□□□ -0.98
SDC3-204ENST00000487984 PSMG4Q5JS54 123 aa8.94□□□□□ -0.98
SDC3-204ENST00000487984 MORN3Q6PF18 240 aaPredicted RBP8.94□□□□□ -0.98
SDC3-204ENST00000487984 OR11H4Q8NGC9 324 aa8.94□□□□□ -0.98
SDC3-204ENST00000487984 AQP10Q96PS8 301 aa8.94□□□□□ -0.98
SDC3-204ENST00000487984 IGHV4-28A0A0C4DH34 117 aa8.93□□□□□ -0.98
SDC3-204ENST00000487984 KANTRA0A1W2PQU2 76 aa8.93□□□□□ -0.98
SDC3-204ENST00000487984 TAAR5O14804 337 aa8.93□□□□□ -0.98
SDC3-204ENST00000487984 BUB3O43684 328 aa8.93□□□□□ -0.98
SDC3-204ENST00000487984 IFNA4P05014 189 aa8.93□□□□□ -0.98
SDC3-204ENST00000487984 RAB11AP62491 216 aa8.93□□□□□ -0.98
SDC3-204ENST00000487984 HBG1P69891 147 aa8.93□□□□□ -0.98
SDC3-204ENST00000487984 HBG2P69892 147 aa8.93□□□□□ -0.98
SDC3-204ENST00000487984 SPANXN5Q5MJ07 72 aa8.93□□□□□ -0.98
SDC3-204ENST00000487984 SIGLEC15Q6ZMC9 328 aa8.93□□□□□ -0.98
SDC3-204ENST00000487984 RPP25LQ8N5L8 163 aaKnown RBP8.93□□□□□ -0.98
SDC3-204ENST00000487984 OR51G1Q8NGK1 321 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms