RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 A0A1B0GW64 132 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 PVALEFA0A1B0GWK0 134 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 CPSF4LA6NMK7 179 aaKnown RBP-0.02□□□□□ -2.41
SMC4-219ENST00000487747 MIF4GDA9UHW6 222 aaKnown RBP-0.02□□□□□ -2.41
SMC4-219ENST00000487747 LYNX1G3V0Z9 82 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 H0Y980 276 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 H0YJX3 145 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 H3BQ15 152 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 BUB1B-PAK6H3BSN5 160 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 M0QZ92 97 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 NCR3O14931 201 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 CST8O60676 142 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 BCE1O60756 84 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 PITX3O75364 302 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 E2F6O75461 281 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 NCR2O95944 276 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 TCL1BO95988 128 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 C1QBP02746 253 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 MT2AP02795 61 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 SMR3BP02814 79 aaPredicted RBP-0.02□□□□□ -2.41
SMC4-219ENST00000487747 APODP05090 189 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 PAEPP09466 180 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 NBEAP1P0C6P0 100 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 LINC00694P0DN24 101 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 IDO1P14902 403 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 ZNF25P17030 456 aaPredicted RBP-0.02□□□□□ -2.41
SMC4-219ENST00000487747 RPS12P25398 132 aaKnown RBP-0.02□□□□□ -2.41
SMC4-219ENST00000487747 SPRR2BP35325 72 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 SPINT3P49223 89 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 CRIP1P50238 77 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 ZNF137PP52743 207 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 EFNA4P52798 201 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 BLVRAP53004 296 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 RPS20P60866 119 aaKnown RBP-0.02□□□□□ -2.41
SMC4-219ENST00000487747 ERVS71-1P61550 626 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 RPS28P62857 69 aaKnown RBP-0.02□□□□□ -2.41
SMC4-219ENST00000487747 HIST1H3AP68431 136 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 HBA1P69905 142 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 BTG2P78543 158 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 QRFPP83859 136 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 H3F3AP84243 136 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 EMX2Q04743 252 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 KLKP1Q107X0 134 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 ALX1Q15699 326 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 HIST3H3Q16695 136 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 ESRGQ1W209 222 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 MPV17LQ2QL34 196 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 KRTAP20-2Q3LI61 65 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 KRTAP6-1Q3LI64 71 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 Q5BKY6 102 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 CDKL4Q5MAI5 379 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 C6orf52Q5T4I8 152 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 HIST2H3PS2Q5TEC6 136 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 Q5VV11 94 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 FKBP1CQ5VVH2 108 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 Q6Q795 121 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 DPPA3Q6W0C5 159 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 TMEM91Q6ZNR0 172 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 Q6ZS92 163 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 GRINAQ7Z429 371 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 LYG2Q86SG7 212 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 C5orf38Q86SI9 138 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 ANGPTL5Q86XS5 388 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 Q8IYB0 196 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 C20orf196Q8IYI0 205 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 FAM9CQ8IZT9 166 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 C10orf111Q8N326 155 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.02□□□□□ -2.41
SMC4-219ENST00000487747 PLPP5Q8NEB5 264 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 OR5A1Q8NGJ0 315 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 PPTC7Q8NI37 304 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 MYOZ3Q8TDC0 251 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 PSMF1Q92530 271 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 PTH2Q96A98 100 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 C8orf76Q96K31 380 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 C2orf50Q96LR7 162 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 PRAP1Q96NZ9 151 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 SPRR4Q96PI1 79 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 TSPAN32Q96QS1 320 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 LYSMD1Q96S90 227 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 AMELXQ99217 191 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 NIPSNAP1Q9BPW8 284 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 WFDC6Q9BQY6 131 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 KIFC1Q9BW19 673 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 CCDC94Q9BW85 323 aaPredicted RBP-0.02□□□□□ -2.41
SMC4-219ENST00000487747 CNFNQ9BYD5 112 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 PARD6GQ9BYG4 376 aaPredicted RBP-0.02□□□□□ -2.41
SMC4-219ENST00000487747 SLC35B3Q9H1N7 401 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 NPVFQ9HCQ7 196 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 C19orf12Q9NSK7 152 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 TAS2R7Q9NYW3 318 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 TAS2R4Q9NYW5 299 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 UBAP1Q9NZ09 502 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 GLTPQ9NZD2 209 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 CACFD1Q9UGQ2 172 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 NDUFAF1Q9Y375 327 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 ASB4Q9Y574 426 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 NAV3Q8IVL0 2385 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 DOT1LQ8TEK3 1739 aa-0.02□□□□□ -2.41
SMC4-219ENST00000487747 LRP1Q07954 4544 aaKnown RBP-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms