RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 RTBDNQ9BSG5 229 aaPredicted RBP10.65□□□□□ -0.7
MCF2L-228ENST00000487354 LYZP61626 148 aa10.64□□□□□ -0.71
MCF2L-228ENST00000487354 GAMTQ14353 236 aa10.64□□□□□ -0.71
MCF2L-228ENST00000487354 ZFAND1Q8TCF1 268 aa10.64□□□□□ -0.71
MCF2L-228ENST00000487354 ABHD1Q96SE0 405 aa10.64□□□□□ -0.71
MCF2L-228ENST00000487354 TMEM208Q9BTX3 173 aa10.64□□□□□ -0.71
MCF2L-228ENST00000487354 SLC25A32Q9H2D1 315 aa10.64□□□□□ -0.71
MCF2L-228ENST00000487354 Q9H3A6 140 aa10.64□□□□□ -0.71
MCF2L-228ENST00000487354 NAA60Q9H7X0 242 aa10.64□□□□□ -0.71
MCF2L-228ENST00000487354 Q9H8V8 135 aa10.64□□□□□ -0.71
MCF2L-228ENST00000487354 RPRMQ9NS64 109 aa10.64□□□□□ -0.71
MCF2L-228ENST00000487354 IGKV1OR2-108A0A075B7D4 117 aa10.63□□□□□ -0.71
MCF2L-228ENST00000487354 TEX13DA0A0J9YY54 714 aaPredicted RBP10.63□□□□□ -0.71
MCF2L-228ENST00000487354 INSP01308 110 aa10.63□□□□□ -0.71
MCF2L-228ENST00000487354 ATP5G1P05496 136 aa10.63□□□□□ -0.71
MCF2L-228ENST00000487354 INAFM2P0DMQ5 153 aa10.63□□□□□ -0.71
MCF2L-228ENST00000487354 ATP5G3P48201 142 aa10.63□□□□□ -0.71
MCF2L-228ENST00000487354 CNN1P51911 297 aaKnown RBP10.63□□□□□ -0.71
MCF2L-228ENST00000487354 KLF9Q13886 244 aaPredicted RBP10.63□□□□□ -0.71
MCF2L-228ENST00000487354 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.63□□□□□ -0.71
MCF2L-228ENST00000487354 Q6ZRN7 208 aaPredicted RBP10.63□□□□□ -0.71
MCF2L-228ENST00000487354 MTFP1Q9UDX5 166 aa10.63□□□□□ -0.71
MCF2L-228ENST00000487354 TRAV8-2A0A0B4J237 113 aa10.62□□□□□ -0.71
MCF2L-228ENST00000487354 SMIM31A0A1B0GVY4 71 aa10.62□□□□□ -0.71
MCF2L-228ENST00000487354 TBPP20226 339 aa10.62□□□□□ -0.71
MCF2L-228ENST00000487354 XGP55808 180 aa10.62□□□□□ -0.71
MCF2L-228ENST00000487354 TMEM268Q5VZI3 342 aa10.62□□□□□ -0.71
MCF2L-228ENST00000487354 FAAP20Q6NZ36 180 aa10.62□□□□□ -0.71
MCF2L-228ENST00000487354 OR4C16Q8NGL9 310 aa10.62□□□□□ -0.71
MCF2L-228ENST00000487354 PRR13Q9NZ81 148 aa10.62□□□□□ -0.71
MCF2L-228ENST00000487354 HSPB7Q9UBY9 170 aa10.62□□□□□ -0.71
MCF2L-228ENST00000487354 TMEM56-RWDD3S4R434 201 aa10.62□□□□□ -0.71
MCF2L-228ENST00000487354 TRAV12-2A0A075B6T6 113 aa10.61□□□□□ -0.71
MCF2L-228ENST00000487354 CBY3A6NI87 242 aa10.61□□□□□ -0.71
MCF2L-228ENST00000487354 ZFP92A6NM28 416 aa10.61□□□□□ -0.71
MCF2L-228ENST00000487354 FUSP35637 526 aaKnown RBP eCLIP10.61□□□□□ -0.71
MCF2L-228ENST00000487354 NCS1P62166 190 aa10.61□□□□□ -0.71
MCF2L-228ENST00000487354 OR2F1Q13607 317 aa10.61□□□□□ -0.71
MCF2L-228ENST00000487354 SCGB2B2Q4G0G5 96 aa10.61□□□□□ -0.71
MCF2L-228ENST00000487354 IGFL4Q6B9Z1 124 aa10.61□□□□□ -0.71
MCF2L-228ENST00000487354 OR8I2Q8N0Y5 310 aa10.61□□□□□ -0.71
MCF2L-228ENST00000487354 LYPD1Q8N2G4 141 aa10.61□□□□□ -0.71
MCF2L-228ENST00000487354 C16orf92Q96LL3 132 aa10.61□□□□□ -0.71
MCF2L-228ENST00000487354 UHRF2Q96PU4 802 aa10.61□□□□□ -0.71
MCF2L-228ENST00000487354 UPK3BQ9BT76 320 aa10.61□□□□□ -0.71
MCF2L-228ENST00000487354 SRRM2Q9UQ35 2752 aaKnown RBP10.6□□□□□ -0.71
MCF2L-228ENST00000487354 CRYM-AS1A6NIL9 109 aa10.6□□□□□ -0.71
MCF2L-228ENST00000487354 MEOX2P50222 304 aa10.6□□□□□ -0.71
MCF2L-228ENST00000487354 TTC32Q5I0X7 151 aa10.6□□□□□ -0.71
MCF2L-228ENST00000487354 SAMD13Q5VXD3 122 aa10.6□□□□□ -0.71
MCF2L-228ENST00000487354 NOXA1Q86UR1 476 aa10.6□□□□□ -0.71
MCF2L-228ENST00000487354 LGI3Q8N145 548 aa10.6□□□□□ -0.71
MCF2L-228ENST00000487354 RNF182Q8N6D2 247 aa10.6□□□□□ -0.71
MCF2L-228ENST00000487354 TMEM229BQ8NBD8 167 aa10.6□□□□□ -0.71
MCF2L-228ENST00000487354 DTD1Q8TEA8 209 aa10.6□□□□□ -0.71
MCF2L-228ENST00000487354 RBKSQ9H477 322 aa10.6□□□□□ -0.71
MCF2L-228ENST00000487354 PFDN2Q9UHV9 154 aa10.6□□□□□ -0.71
MCF2L-228ENST00000487354 U3KQ87 197 aa10.6□□□□□ -0.71
MCF2L-228ENST00000487354 A0A1W2PPQ1 181 aa10.59□□□□□ -0.71
MCF2L-228ENST00000487354 SULT1A3P0DMM9 295 aa10.59□□□□□ -0.71
MCF2L-228ENST00000487354 SULT1A4P0DMN0 295 aa10.59□□□□□ -0.71
MCF2L-228ENST00000487354 GPX4P36969 197 aaPredicted RBP10.59□□□□□ -0.71
MCF2L-228ENST00000487354 DLK1P80370 383 aa10.59□□□□□ -0.71
MCF2L-228ENST00000487354 ESRGQ1W209 222 aa10.59□□□□□ -0.71
MCF2L-228ENST00000487354 Q5VSD8 79 aa10.59□□□□□ -0.71
MCF2L-228ENST00000487354 GPR107Q5VW38 600 aa10.59□□□□□ -0.71
MCF2L-228ENST00000487354 LINC00612Q8N6U2 182 aa10.59□□□□□ -0.71
MCF2L-228ENST00000487354 THAP8Q8NA92 274 aa10.59□□□□□ -0.71
MCF2L-228ENST00000487354 TRGV9Q99603 122 aa10.59□□□□□ -0.71
MCF2L-228ENST00000487354 RSG1Q9BU20 258 aa10.59□□□□□ -0.71
MCF2L-228ENST00000487354 ZNF98A6NK75 572 aa10.58□□□□□ -0.72
MCF2L-228ENST00000487354 BOLA2-SMG1P6H3BVE0 249 aa10.58□□□□□ -0.72
MCF2L-228ENST00000487354 RAB3DO95716 219 aa10.58□□□□□ -0.72
MCF2L-228ENST00000487354 HOXA5P20719 270 aa10.58□□□□□ -0.72
MCF2L-228ENST00000487354 B2MP61769 119 aa10.58□□□□□ -0.72
MCF2L-228ENST00000487354 CLINT1Q14677 625 aa10.58□□□□□ -0.72
MCF2L-228ENST00000487354 STEAP1BQ6NZ63 245 aa10.58□□□□□ -0.72
MCF2L-228ENST00000487354 TMEM182Q6ZP80 229 aaPredicted RBP10.58□□□□□ -0.72
MCF2L-228ENST00000487354 RNASE8Q8TDE3 154 aaKnown RBP10.58□□□□□ -0.72
MCF2L-228ENST00000487354 SLC35E1Q96K37 410 aa10.58□□□□□ -0.72
MCF2L-228ENST00000487354 SLC25A39Q9BZJ4 359 aaPredicted RBP10.58□□□□□ -0.72
MCF2L-228ENST00000487354 Q9H521 79 aa10.58□□□□□ -0.72
MCF2L-228ENST00000487354 GPR132Q9UNW8 380 aa10.58□□□□□ -0.72
MCF2L-228ENST00000487354 TRAV26-1A0A087WT03 109 aa10.57□□□□□ -0.72
MCF2L-228ENST00000487354 SNRPGP15A8MWD9 76 aa10.57□□□□□ -0.72
MCF2L-228ENST00000487354 DUSP14O95147 198 aaKnown RBP10.57□□□□□ -0.72
MCF2L-228ENST00000487354 TNFAIP8O95379 198 aa10.57□□□□□ -0.72
MCF2L-228ENST00000487354 ATP6V1G2O95670 118 aa10.57□□□□□ -0.72
MCF2L-228ENST00000487354 GALR1P47211 349 aa10.57□□□□□ -0.72
MCF2L-228ENST00000487354 LINC00315P59091 139 aa10.57□□□□□ -0.72
MCF2L-228ENST00000487354 TAS2R19P59542 299 aa10.57□□□□□ -0.72
MCF2L-228ENST00000487354 VBP1P61758 197 aa10.57□□□□□ -0.72
MCF2L-228ENST00000487354 IL22RA2Q969J5 263 aa10.57□□□□□ -0.72
MCF2L-228ENST00000487354 PPP1R14BQ96C90 147 aa10.57□□□□□ -0.72
MCF2L-228ENST00000487354 SLC25A22Q9H936 323 aa10.57□□□□□ -0.72
MCF2L-228ENST00000487354 ZNF586Q9NXT0 402 aa10.57□□□□□ -0.72
MCF2L-228ENST00000487354 C14orf166Q9Y224 244 aaKnown RBP10.57□□□□□ -0.72
MCF2L-228ENST00000487354 MRPS16Q9Y3D3 137 aaKnown RBP10.57□□□□□ -0.72
MCF2L-228ENST00000487354 PRSS46E5RG02 174 aa10.56□□□□□ -0.72
MCF2L-228ENST00000487354 PRB4P10163 310 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms