RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 C10orf113Q5VZT2 155 aa5.37□□□□□ -1.55
UBR4-214ENST00000486515 HAPLN4Q86UW8 402 aa5.37□□□□□ -1.55
UBR4-214ENST00000486515 GPHB5Q86YW7 130 aa5.37□□□□□ -1.55
UBR4-214ENST00000486515 C1QL4Q86Z23 238 aa5.37□□□□□ -1.55
UBR4-214ENST00000486515 STPG3Q8N7X2 389 aa5.37□□□□□ -1.55
UBR4-214ENST00000486515 STOML3Q8TAV4 291 aa5.37□□□□□ -1.55
UBR4-214ENST00000486515 MYOZ3Q8TDC0 251 aa5.37□□□□□ -1.55
UBR4-214ENST00000486515 RNF125Q96EQ8 232 aa5.37□□□□□ -1.55
UBR4-214ENST00000486515 PHYHIPLQ96FC7 376 aa5.37□□□□□ -1.55
UBR4-214ENST00000486515 CCDC140Q96MF4 163 aa5.37□□□□□ -1.55
UBR4-214ENST00000486515 PSMG3Q9BT73 122 aaPredicted RBP5.37□□□□□ -1.55
UBR4-214ENST00000486515 GGTLC1Q9BX51 225 aa5.37□□□□□ -1.55
UBR4-214ENST00000486515 KRTAP3-3Q9BYR6 98 aa5.37□□□□□ -1.55
UBR4-214ENST00000486515 KRTAP3-2Q9BYR7 98 aa5.37□□□□□ -1.55
UBR4-214ENST00000486515 SLC39A9Q9NUM3 307 aa5.37□□□□□ -1.55
UBR4-214ENST00000486515 HIGD1AQ9Y241 93 aa5.37□□□□□ -1.55
UBR4-214ENST00000486515 DMRT1Q9Y5R6 373 aa5.37□□□□□ -1.55
UBR4-214ENST00000486515 IGHV4OR15-8A0A075B7B6 117 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 A0A087WW49 117 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 OVOL1O14753 267 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 CD5P06127 495 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 CD33P20138 364 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 SYNJ2BPP57105 145 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 RHOBP62745 196 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 RPL11P62913 178 aaKnown RBP5.36□□□□□ -1.55
UBR4-214ENST00000486515 DEFB136Q30KP8 78 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 TCTEX1D4Q5JR98 221 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 TMEM182Q6ZP80 229 aaPredicted RBP5.36□□□□□ -1.55
UBR4-214ENST00000486515 STXBP6Q8NFX7 210 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 OR10G4Q8NGN3 311 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 OR10G9Q8NGN4 311 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 OR10G7Q8NGN6 311 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 LRRC20Q8TCA0 184 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 DYNLRB2Q8TF09 96 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 GATAD1Q8WUU5 269 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 RNF141Q8WVD5 230 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 ST8SIA2Q92186 375 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 MARC2Q969Z3 335 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 MGST2Q99735 147 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 CITED1Q99966 193 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 RSG1Q9BU20 258 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 CHRDL1Q9BU40 450 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 MCRIP2Q9BUT9 160 aaKnown RBP5.36□□□□□ -1.55
UBR4-214ENST00000486515 ACTR3CQ9C0K3 210 aaPredicted RBP5.36□□□□□ -1.55
UBR4-214ENST00000486515 DNAJC4Q9NNZ3 241 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 DAZ1Q9NQZ3 744 aaKnown RBP5.36□□□□□ -1.55
UBR4-214ENST00000486515 DOK5Q9P104 306 aa5.36□□□□□ -1.55
UBR4-214ENST00000486515 LSM4Q9Y4Z0 139 aaKnown RBP5.36□□□□□ -1.55
UBR4-214ENST00000486515 HERC2O95714 4834 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 PRSS47A8MTI9 375 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 K7EMT4 169 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 LGALS9O00182 355 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 IGKV1-17P01599 117 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 PAFAH1B2P68402 229 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 KIAA0141Q14154 515 aaPredicted RBP5.35□□□□□ -1.55
UBR4-214ENST00000486515 TMEM41BQ5BJD5 291 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 FAM78BQ5VT40 261 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 MIC13Q5XKP0 118 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 LAMTOR1Q6IAA8 161 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 TOMM20LQ6UXN7 152 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 DPPA3Q6W0C5 159 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 LINC00305Q7Z4B0 112 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 WIPF2Q8TF74 440 aaPredicted RBP5.35□□□□□ -1.55
UBR4-214ENST00000486515 TMED6Q8WW62 240 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 GPR82Q96P67 336 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 DUX3Q96PT4 197 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 MRPL32Q9BYC8 188 aaKnown RBP5.35□□□□□ -1.55
UBR4-214ENST00000486515 GPR61Q9BZJ8 451 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 ARV1Q9H2C2 271 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 SLC25A22Q9H936 323 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 WFDC1Q9HC57 220 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 MRPL36Q9P0J6 103 aaKnown RBP5.35□□□□□ -1.55
UBR4-214ENST00000486515 SLC45A2Q9UMX9 530 aa5.35□□□□□ -1.55
UBR4-214ENST00000486515 IGKV1D-37A0A075B6S9 117 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 IGKV1OR2-108A0A075B7D4 117 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 OR7C2O60412 319 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 SAP30O75446 220 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 SNAPINO95295 136 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 TRBV12-3P01733 135 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 SPP1P10451 314 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 GATA2P23769 480 aaPredicted RBP5.34□□□□□ -1.55
UBR4-214ENST00000486515 ADMP35318 185 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 GALR1P47211 349 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 CDC34P49427 236 aaPredicted RBP5.34□□□□□ -1.55
UBR4-214ENST00000486515 SLURP1P55000 103 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 PLP1P60201 277 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 BLOC1S1P78537 153 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 PRR20EP86478 221 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 PRR20CP86479 221 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 PRR20DP86480 221 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 PRR20BP86481 221 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 PRR20AP86496 221 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 KLF5Q13887 457 aaPredicted RBP5.34□□□□□ -1.55
UBR4-214ENST00000486515 KHDC3LQ587J8 217 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 C16orf54Q6UWD8 224 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 ALKAL2Q6UX46 152 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 RBPMS2Q6ZRY4 209 aaKnown RBP5.34□□□□□ -1.55
UBR4-214ENST00000486515 REC114Q7Z4M0 266 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 BPIFA4PQ86YQ2 179 aa5.34□□□□□ -1.55
UBR4-214ENST00000486515 OR8I2Q8N0Y5 310 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms