RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 MGST2Q99735 147 aa8.86□□□□□ -0.99
HPS4-214ENST00000485842 MS4A6AQ9H2W1 248 aa8.86□□□□□ -0.99
HPS4-214ENST00000485842 TUBA4BQ9H853 241 aa8.86□□□□□ -0.99
HPS4-214ENST00000485842 PFDN2Q9UHV9 154 aa8.86□□□□□ -0.99
HPS4-214ENST00000485842 HELTA6NFD8 242 aa8.85□□□□□ -0.99
HPS4-214ENST00000485842 OR11H12B2RN74 326 aa8.85□□□□□ -0.99
HPS4-214ENST00000485842 BUB3O43684 328 aa8.85□□□□□ -0.99
HPS4-214ENST00000485842 GIPP09681 153 aaPredicted RBP8.85□□□□□ -0.99
HPS4-214ENST00000485842 OR5G3P0C626 314 aa8.85□□□□□ -0.99
HPS4-214ENST00000485842 FGF7P21781 194 aa8.85□□□□□ -0.99
HPS4-214ENST00000485842 RPL12P30050 165 aaKnown RBP8.85□□□□□ -0.99
HPS4-214ENST00000485842 CAMLGP49069 296 aa8.85□□□□□ -0.99
HPS4-214ENST00000485842 VWC2Q2TAL6 325 aa8.85□□□□□ -0.99
HPS4-214ENST00000485842 ZNF546Q86UE3 836 aa8.85□□□□□ -0.99
HPS4-214ENST00000485842 STPG3Q8N7X2 389 aa8.85□□□□□ -0.99
HPS4-214ENST00000485842 ASCL2Q99929 193 aa8.85□□□□□ -0.99
HPS4-214ENST00000485842 B9D2Q9BPU9 175 aa8.85□□□□□ -0.99
HPS4-214ENST00000485842 SRD5A3Q9H8P0 318 aa8.85□□□□□ -0.99
HPS4-214ENST00000485842 WDR83OSQ9Y284 106 aa8.85□□□□□ -0.99
HPS4-214ENST00000485842 RAP2BP61225 183 aa8.84□□□□□ -0.99
HPS4-214ENST00000485842 RAB31Q13636 194 aa8.84□□□□□ -0.99
HPS4-214ENST00000485842 ODF3L2Q3SX64 289 aa8.84□□□□□ -0.99
HPS4-214ENST00000485842 MIC13Q5XKP0 118 aa8.84□□□□□ -0.99
HPS4-214ENST00000485842 SIGLEC15Q6ZMC9 328 aa8.84□□□□□ -0.99
HPS4-214ENST00000485842 GGTLC1Q9BX51 225 aa8.84□□□□□ -0.99
HPS4-214ENST00000485842 SMIM3Q9BZL3 60 aa8.84□□□□□ -0.99
HPS4-214ENST00000485842 ARL6Q9H0F7 186 aa8.84□□□□□ -0.99
HPS4-214ENST00000485842 SLC25A22Q9H936 323 aa8.84□□□□□ -0.99
HPS4-214ENST00000485842 SLC45A2Q9UMX9 530 aa8.84□□□□□ -0.99
HPS4-214ENST00000485842 HIGD1AQ9Y241 93 aa8.84□□□□□ -0.99
HPS4-214ENST00000485842 BOLA1Q9Y3E2 137 aa8.84□□□□□ -0.99
HPS4-214ENST00000485842 HSPB11Q9Y547 144 aa8.84□□□□□ -0.99
HPS4-214ENST00000485842 HYPMO75409 117 aa8.83□□□□□ -1
HPS4-214ENST00000485842 LYL1P12980 280 aa8.83□□□□□ -1
HPS4-214ENST00000485842 FGL1Q08830 312 aa8.83□□□□□ -1
HPS4-214ENST00000485842 OR8I2Q8N0Y5 310 aa8.83□□□□□ -1
HPS4-214ENST00000485842 FAM24BQ8N5W8 94 aa8.83□□□□□ -1
HPS4-214ENST00000485842 ASB13Q8WXK3 278 aa8.83□□□□□ -1
HPS4-214ENST00000485842 UHRF2Q96PU4 802 aa8.83□□□□□ -1
HPS4-214ENST00000485842 SCRT1Q9BWW7 348 aa8.83□□□□□ -1
HPS4-214ENST00000485842 MAP6D1Q9H9H5 199 aa8.83□□□□□ -1
HPS4-214ENST00000485842 C19orf73Q9NVV2 129 aa8.83□□□□□ -1
HPS4-214ENST00000485842 FBXL17Q9UF56 701 aa8.83□□□□□ -1
HPS4-214ENST00000485842 FXYD6-FXYD2A0A087WZ82 144 aa8.82□□□□□ -1
HPS4-214ENST00000485842 TRAV2A0A0B4J234 112 aa8.82□□□□□ -1
HPS4-214ENST00000485842 ZNF98A6NK75 572 aa8.82□□□□□ -1
HPS4-214ENST00000485842 H3BRN7 92 aa8.82□□□□□ -1
HPS4-214ENST00000485842 K7EQG2 157 aa8.82□□□□□ -1
HPS4-214ENST00000485842 COX7A2P2O60397 106 aa8.82□□□□□ -1
HPS4-214ENST00000485842 S100A7P31151 101 aa8.82□□□□□ -1
HPS4-214ENST00000485842 AP2S1P53680 142 aaPredicted RBP8.82□□□□□ -1
HPS4-214ENST00000485842 PLP1P60201 277 aa8.82□□□□□ -1
HPS4-214ENST00000485842 OPCMLQ14982 345 aa8.82□□□□□ -1
HPS4-214ENST00000485842 Q5BKY6 102 aa8.82□□□□□ -1
HPS4-214ENST00000485842 C1orf194Q5T5A4 169 aa8.82□□□□□ -1
HPS4-214ENST00000485842 LEMD1Q68G75 181 aa8.82□□□□□ -1
HPS4-214ENST00000485842 APRG1Q8IVJ8 170 aa8.82□□□□□ -1
HPS4-214ENST00000485842 OR2T35Q8NGX2 323 aa8.82□□□□□ -1
HPS4-214ENST00000485842 ATP5SQ99766 215 aa8.82□□□□□ -1
HPS4-214ENST00000485842 SLC25A39Q9BZJ4 359 aaPredicted RBP8.82□□□□□ -1
HPS4-214ENST00000485842 ARV1Q9H2C2 271 aa8.82□□□□□ -1
HPS4-214ENST00000485842 SLC25A32Q9H2D1 315 aa8.82□□□□□ -1
HPS4-214ENST00000485842 A8MZ25 164 aa8.81□□□□□ -1
HPS4-214ENST00000485842 ZNF688P0C7X2 276 aa8.81□□□□□ -1
HPS4-214ENST00000485842 B2MP61769 119 aa8.81□□□□□ -1
HPS4-214ENST00000485842 ZNF124Q15973 351 aa8.81□□□□□ -1
HPS4-214ENST00000485842 PXDC1Q5TGL8 231 aa8.81□□□□□ -1
HPS4-214ENST00000485842 Q6ZRG5 221 aa8.81□□□□□ -1
HPS4-214ENST00000485842 SBSPONQ8IVN8 264 aa8.81□□□□□ -1
HPS4-214ENST00000485842 DCANP1Q8TF63 244 aa8.81□□□□□ -1
HPS4-214ENST00000485842 CITED4Q96RK1 184 aa8.81□□□□□ -1
HPS4-214ENST00000485842 SHANK2-AS3Q9BTD1 123 aa8.81□□□□□ -1
HPS4-214ENST00000485842 NPCDR1Q9BY65 106 aa8.81□□□□□ -1
HPS4-214ENST00000485842 NRN1Q9NPD7 142 aa8.81□□□□□ -1
HPS4-214ENST00000485842 PXMP4Q9Y6I8 212 aa8.81□□□□□ -1
HPS4-214ENST00000485842 PRKDCP78527 4128 aaKnown RBP8.81□□□□□ -1
HPS4-214ENST00000485842 MPDU1O75352 247 aa8.8□□□□□ -1
HPS4-214ENST00000485842 IFNA5P01569 189 aa8.8□□□□□ -1
HPS4-214ENST00000485842 GALR1P47211 349 aa8.8□□□□□ -1
HPS4-214ENST00000485842 RPL29P47914 159 aaKnown RBP8.8□□□□□ -1
HPS4-214ENST00000485842 CMC4P56277 68 aaPredicted RBP8.8□□□□□ -1
HPS4-214ENST00000485842 DEFB131AP59861 70 aa8.8□□□□□ -1
HPS4-214ENST00000485842 C10orf113Q5VZT2 155 aa8.8□□□□□ -1
HPS4-214ENST00000485842 PATE2Q6UY27 113 aa8.8□□□□□ -1
HPS4-214ENST00000485842 S100A7AQ86SG5 101 aa8.8□□□□□ -1
HPS4-214ENST00000485842 ZNF709Q8N972 641 aa8.8□□□□□ -1
HPS4-214ENST00000485842 CHAC2Q8WUX2 184 aa8.8□□□□□ -1
HPS4-214ENST00000485842 FAM110AQ9BQ89 295 aa8.8□□□□□ -1
HPS4-214ENST00000485842 WDR61Q9GZS3 305 aaKnown RBP8.8□□□□□ -1
HPS4-214ENST00000485842 SLC39A9Q9NUM3 307 aa8.8□□□□□ -1
HPS4-214ENST00000485842 RBMY1BA6NDE4 496 aaKnown RBP8.79□□□□□ -1
HPS4-214ENST00000485842 RBMY1EA6NEQ0 496 aaKnown RBP8.79□□□□□ -1
HPS4-214ENST00000485842 SMLR1H3BR10 107 aa8.79□□□□□ -1
HPS4-214ENST00000485842 RBMY1DP0C7P1 496 aaKnown RBP8.79□□□□□ -1
HPS4-214ENST00000485842 PRR20EP86478 221 aa8.79□□□□□ -1
HPS4-214ENST00000485842 PRR20CP86479 221 aa8.79□□□□□ -1
HPS4-214ENST00000485842 PRR20DP86480 221 aa8.79□□□□□ -1
HPS4-214ENST00000485842 PRR20BP86481 221 aa8.79□□□□□ -1
HPS4-214ENST00000485842 PRR20AP86496 221 aa8.79□□□□□ -1
HPS4-214ENST00000485842 HAGHQ16775 308 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms