RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 FXYD6-FXYD2A0A087WZ82 144 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 BORCS7-ASMTA0A0B4J1R7 106 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 TRAV2A0A0B4J234 112 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 UBE2L5PA0A1B0GUS4 154 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 H0YIZ8 118 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 TAAR5O14804 337 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 OR5G3P0C626 314 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 LINC00869P0C866 280 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 FGF7P21781 194 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 GALR1P47211 349 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 RPL29P47914 159 aaKnown RBP6.25□□□□□ -1.41
SF3A1-208ENST00000485618 MEOX2P50222 304 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 PLP1P60201 277 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 NHLH2Q02577 135 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 ARL16Q0P5N6 197 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 CLINT1Q14677 625 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 DEFB121Q5J5C9 76 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 Q6ZNX1 250 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 TCF24Q7RTU0 167 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 AQP10Q96PS8 301 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 ARL6Q9H0F7 186 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 TUBA4BQ9H853 241 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 DNAJC4Q9NNZ3 241 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 MLXQ9UH92 298 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 LSM4Q9Y4Z0 139 aaKnown RBP6.25□□□□□ -1.41
SF3A1-208ENST00000485618 RPL7P18124 248 aaKnown RBP6.24□□□□□ -1.41
SF3A1-208ENST00000485618 C4BPBP20851 252 aa6.24□□□□□ -1.41
SF3A1-208ENST00000485618 ID1P41134 155 aa6.24□□□□□ -1.41
SF3A1-208ENST00000485618 KRTAP10-11P60412 298 aa6.24□□□□□ -1.41
SF3A1-208ENST00000485618 SNRPD3P62318 126 aaKnown RBP6.24□□□□□ -1.41
SF3A1-208ENST00000485618 USF2Q15853 346 aaPredicted RBP6.24□□□□□ -1.41
SF3A1-208ENST00000485618 C10orf113Q5VZT2 155 aa6.24□□□□□ -1.41
SF3A1-208ENST00000485618 HAPLN4Q86UW8 402 aa6.24□□□□□ -1.41
SF3A1-208ENST00000485618 TMEM61Q8N0U2 210 aa6.24□□□□□ -1.41
SF3A1-208ENST00000485618 ST8SIA2Q92186 375 aa6.24□□□□□ -1.41
SF3A1-208ENST00000485618 RNF2Q99496 336 aa6.24□□□□□ -1.41
SF3A1-208ENST00000485618 NEURL2Q9BR09 285 aa6.24□□□□□ -1.41
SF3A1-208ENST00000485618 PARD6GQ9BYG4 376 aaPredicted RBP6.24□□□□□ -1.41
SF3A1-208ENST00000485618 SEPSECSQ9HD40 501 aaKnown RBP6.24□□□□□ -1.41
SF3A1-208ENST00000485618 SMAD5-AS1Q9Y6J3 95 aa6.24□□□□□ -1.41
SF3A1-208ENST00000485618 U3KQE9 123 aa6.24□□□□□ -1.41
SF3A1-208ENST00000485618 IGHV3OR16-13A0A075B7E8 117 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 IGHV3-49A0A0A0MS15 119 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 IGHV3-74A0A0B4J1X5 117 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 IGHV3-66A0A0C4DH42 116 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 A0A0D9SG52 128 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 ZNF785A8K8V0 405 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 BUB3O43684 328 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 MBP02144 154 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 CD81P60033 236 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 B2MP61769 119 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 EIF5AP63241 154 aaKnown RBP6.23□□□□□ -1.41
SF3A1-208ENST00000485618 C16orf54Q6UWD8 224 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 SIGLEC15Q6ZMC9 328 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 ADAMTSL5Q6ZMM2 481 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 STXBP6Q8NFX7 210 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 GATAD1Q8WUU5 269 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 GNPNAT1Q96EK6 184 aaPredicted RBP6.23□□□□□ -1.41
SF3A1-208ENST00000485618 PRR25Q96S07 402 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 MGST2Q99735 147 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 FAM110AQ9BQ89 295 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 NPCDR1Q9BY65 106 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 SMIM3Q9BZL3 60 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 WDR61Q9GZS3 305 aaKnown RBP6.23□□□□□ -1.41
SF3A1-208ENST00000485618 MFFQ9GZY8 342 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 NRN1Q9NPD7 142 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 SLC39A9Q9NUM3 307 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 PXMP4Q9Y6I8 212 aa6.23□□□□□ -1.41
SF3A1-208ENST00000485618 ZNF98A6NK75 572 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 HMSDA8MTL9 139 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 OR11H12B2RN74 326 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 JTBO76095 146 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 APOHP02749 345 aaPredicted RBP6.22□□□□□ -1.41
SF3A1-208ENST00000485618 ATF4P18848 351 aaPredicted RBP6.22□□□□□ -1.41
SF3A1-208ENST00000485618 GATA2P23769 480 aaPredicted RBP6.22□□□□□ -1.41
SF3A1-208ENST00000485618 PRR20EP86478 221 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 PRR20CP86479 221 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 PRR20DP86480 221 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 PRR20BP86481 221 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 PRR20AP86496 221 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 FAM90A2PQ658T7 463 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 LINC00305Q7Z4B0 112 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 AKAP14Q86UN6 197 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 BPIFA4PQ86YQ2 179 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 GBGT1Q8N5D6 347 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 LRRC20Q8TCA0 184 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 SHANK2-AS3Q9BTD1 123 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 GGTLC1Q9BX51 225 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 SLC25A39Q9BZJ4 359 aaPredicted RBP6.22□□□□□ -1.41
SF3A1-208ENST00000485618 ARV1Q9H2C2 271 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 MS4A6AQ9H2W1 248 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 SLC25A22Q9H936 323 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 CLEC5AQ9NY25 188 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 DOK5Q9P104 306 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 TNFSF18Q9UNG2 199 aa6.22□□□□□ -1.41
SF3A1-208ENST00000485618 IGKV3-7A0A075B6H7 116 aa6.21□□□□□ -1.42
SF3A1-208ENST00000485618 KANTRA0A1W2PQU2 76 aa6.21□□□□□ -1.42
SF3A1-208ENST00000485618 IZUMO1RA6ND01 250 aa6.21□□□□□ -1.42
SF3A1-208ENST00000485618 ARPC5O15511 151 aa6.21□□□□□ -1.42
SF3A1-208ENST00000485618 PFDN1O60925 122 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms