RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SRPXP78539 464 aa13.72□□□□□ -0.21
COL27A1-205ENST00000485397 C1orf194Q5T5A4 169 aa13.72□□□□□ -0.21
COL27A1-205ENST00000485397 PPP1R14BQ96C90 147 aa13.72□□□□□ -0.21
COL27A1-205ENST00000485397 SOSTQ9BQB4 213 aa13.72□□□□□ -0.21
COL27A1-205ENST00000485397 DKK2Q9UBU2 259 aa13.72□□□□□ -0.21
COL27A1-205ENST00000485397 PAIP2BQ9ULR5 123 aaKnown RBP13.72□□□□□ -0.21
COL27A1-205ENST00000485397 IGKV1OR2-108A0A075B7D4 117 aa13.71□□□□□ -0.21
COL27A1-205ENST00000485397 FABP1P07148 127 aa13.71□□□□□ -0.21
COL27A1-205ENST00000485397 ZNF79Q15937 498 aa13.71□□□□□ -0.21
COL27A1-205ENST00000485397 FAM222AQ5U5X8 452 aa13.71□□□□□ -0.21
COL27A1-205ENST00000485397 OR8I2Q8N0Y5 310 aa13.71□□□□□ -0.21
COL27A1-205ENST00000485397 C1orf158Q8N1D5 194 aa13.71□□□□□ -0.21
COL27A1-205ENST00000485397 RAB2BQ8WUD1 216 aa13.71□□□□□ -0.21
COL27A1-205ENST00000485397 CLUHP3Q96NS8 147 aa13.71□□□□□ -0.21
COL27A1-205ENST00000485397 TRGV9Q99603 122 aa13.71□□□□□ -0.21
COL27A1-205ENST00000485397 DNAH11Q96DT5 4516 aa13.71□□□□□ -0.22
COL27A1-205ENST00000485397 FABP12A6NFH5 140 aa13.7□□□□□ -0.22
COL27A1-205ENST00000485397 PRSS29PA6NIE9 313 aa13.7□□□□□ -0.22
COL27A1-205ENST00000485397 TNFSF8P32971 234 aa13.7□□□□□ -0.22
COL27A1-205ENST00000485397 RAB11AP62491 216 aa13.7□□□□□ -0.22
COL27A1-205ENST00000485397 PSG9Q00887 426 aa13.7□□□□□ -0.22
COL27A1-205ENST00000485397 FAM78BQ5VT40 261 aa13.7□□□□□ -0.22
COL27A1-205ENST00000485397 TMED4Q7Z7H5 227 aa13.7□□□□□ -0.22
COL27A1-205ENST00000485397 C20orf173Q96LM9 149 aa13.7□□□□□ -0.22
COL27A1-205ENST00000485397 SLIRPQ9GZT3 109 aaKnown RBP13.7□□□□□ -0.22
COL27A1-205ENST00000485397 PCLOQ9Y6V0 5065 aa13.7□□□□□ -0.22
COL27A1-205ENST00000485397 A0A0J9YX75 114 aa13.69□□□□□ -0.22
COL27A1-205ENST00000485397 ISLRO14498 428 aa13.69□□□□□ -0.22
COL27A1-205ENST00000485397 PAX9P55771 341 aa13.69□□□□□ -0.22
COL27A1-205ENST00000485397 SPATA31B1PQ5VZV4 182 aa13.69□□□□□ -0.22
COL27A1-205ENST00000485397 EBLN2Q6P2I7 272 aa13.69□□□□□ -0.22
COL27A1-205ENST00000485397 THAP8Q8NA92 274 aa13.69□□□□□ -0.22
COL27A1-205ENST00000485397 NIPSNAP3BQ9BS92 247 aa13.69□□□□□ -0.22
COL27A1-205ENST00000485397 GOLT1BQ9Y3E0 138 aa13.69□□□□□ -0.22
COL27A1-205ENST00000485397 IGLV2-18A0A075B6J9 118 aa13.68□□□□□ -0.22
COL27A1-205ENST00000485397 HTN3P15516 51 aa13.68□□□□□ -0.22
COL27A1-205ENST00000485397 TMBIM6P55061 237 aa13.68□□□□□ -0.22
COL27A1-205ENST00000485397 LGALS9BQ3B8N2 356 aa13.68□□□□□ -0.22
COL27A1-205ENST00000485397 UBE2DNLQ8IWF7 75 aa13.68□□□□□ -0.22
COL27A1-205ENST00000485397 C16orf92Q96LL3 132 aa13.68□□□□□ -0.22
COL27A1-205ENST00000485397 C17orf77Q96MU5 243 aa13.68□□□□□ -0.22
COL27A1-205ENST00000485397 C7orf50Q9BRJ6 194 aaKnown RBP13.68□□□□□ -0.22
COL27A1-205ENST00000485397 SLC25A32Q9H2D1 315 aa13.68□□□□□ -0.22
COL27A1-205ENST00000485397 LOC102723971A0A1B0GUV8 181 aa13.67□□□□□ -0.22
COL27A1-205ENST00000485397 DUXBA0A1W2PPF3 345 aa13.67□□□□□ -0.22
COL27A1-205ENST00000485397 IFNA21P01568 189 aa13.67□□□□□ -0.22
COL27A1-205ENST00000485397 HBE1P02100 147 aa13.67□□□□□ -0.22
COL27A1-205ENST00000485397 FAM210BQ96KR6 192 aa13.67□□□□□ -0.22
COL27A1-205ENST00000485397 BCL7BQ9BQE9 202 aa13.67□□□□□ -0.22
COL27A1-205ENST00000485397 MAGT1Q9H0U3 335 aa13.67□□□□□ -0.22
COL27A1-205ENST00000485397 SLC25A22Q9H936 323 aa13.67□□□□□ -0.22
COL27A1-205ENST00000485397 YTHDF2Q9Y5A9 579 aaKnown RBP13.67□□□□□ -0.22
COL27A1-205ENST00000485397 TEX48A0A1B0GUV7 120 aa13.66□□□□□ -0.22
COL27A1-205ENST00000485397 VAMP1P23763 118 aa13.66□□□□□ -0.22
COL27A1-205ENST00000485397 GATA2P23769 480 aaPredicted RBP13.66□□□□□ -0.22
COL27A1-205ENST00000485397 TMEM128Q5BJH2 165 aa13.66□□□□□ -0.22
COL27A1-205ENST00000485397 TMEM182Q6ZP80 229 aaPredicted RBP13.66□□□□□ -0.22
COL27A1-205ENST00000485397 LRTM2Q8N967 370 aa13.66□□□□□ -0.22
COL27A1-205ENST00000485397 RSG1Q9BU20 258 aa13.66□□□□□ -0.22
COL27A1-205ENST00000485397 RPRMQ9NS64 109 aa13.66□□□□□ -0.22
COL27A1-205ENST00000485397 PKHD1P08F94 4074 aa13.65□□□□□ -0.22
COL27A1-205ENST00000485397 PIGBOS1A0A0B4J2F0 54 aa13.65□□□□□ -0.22
COL27A1-205ENST00000485397 ZNF98A6NK75 572 aa13.65□□□□□ -0.22
COL27A1-205ENST00000485397 PRSS46E5RG02 174 aa13.65□□□□□ -0.22
COL27A1-205ENST00000485397 WRBO00258 174 aa13.65□□□□□ -0.22
COL27A1-205ENST00000485397 MED6O75586 246 aa13.65□□□□□ -0.22
COL27A1-205ENST00000485397 SLC25A6P12236 298 aa13.65□□□□□ -0.22
COL27A1-205ENST00000485397 FAUP35544 74 aaKnown RBP13.65□□□□□ -0.22
COL27A1-205ENST00000485397 GALR1P47211 349 aa13.65□□□□□ -0.22
COL27A1-205ENST00000485397 MEOX2P50222 304 aa13.65□□□□□ -0.22
COL27A1-205ENST00000485397 RRN3P1Q2M238 152 aa13.65□□□□□ -0.22
COL27A1-205ENST00000485397 GGNBP1Q5YKI7 109 aa13.65□□□□□ -0.22
COL27A1-205ENST00000485397 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.65□□□□□ -0.22
COL27A1-205ENST00000485397 MCFD2Q8NI22 146 aa13.65□□□□□ -0.22
COL27A1-205ENST00000485397 TRIM63Q969Q1 353 aa13.65□□□□□ -0.22
COL27A1-205ENST00000485397 DOK5Q9P104 306 aa13.65□□□□□ -0.22
COL27A1-205ENST00000485397 A8MTW9 85 aa13.64□□□□□ -0.23
COL27A1-205ENST00000485397 H3BMQ9 156 aa13.64□□□□□ -0.23
COL27A1-205ENST00000485397 SYNGR2O43760 224 aa13.64□□□□□ -0.23
COL27A1-205ENST00000485397 CFDP00746 253 aaPredicted RBP13.64□□□□□ -0.23
COL27A1-205ENST00000485397 ORM2P19652 201 aa13.64□□□□□ -0.23
COL27A1-205ENST00000485397 OXA1LQ15070 435 aa13.64□□□□□ -0.23
COL27A1-205ENST00000485397 SAMD13Q5VXD3 122 aa13.64□□□□□ -0.23
COL27A1-205ENST00000485397 AMTNQ6UX39 209 aa13.64□□□□□ -0.23
COL27A1-205ENST00000485397 Q6ZR54 194 aa13.64□□□□□ -0.23
COL27A1-205ENST00000485397 TOMM5Q8N4H5 51 aa13.64□□□□□ -0.23
COL27A1-205ENST00000485397 SFT2D2O95562 160 aa13.63□□□□□ -0.23
COL27A1-205ENST00000485397 PRM2P04554 102 aa13.63□□□□□ -0.23
COL27A1-205ENST00000485397 HOXB5P09067 269 aa13.63□□□□□ -0.23
COL27A1-205ENST00000485397 PYDC2Q56P42 97 aa13.63□□□□□ -0.23
COL27A1-205ENST00000485397 IGFL4Q6B9Z1 124 aa13.63□□□□□ -0.23
COL27A1-205ENST00000485397 TMEM88Q6PEY1 159 aa13.63□□□□□ -0.23
COL27A1-205ENST00000485397 IGF2BP2-AS1Q96M15 143 aa13.63□□□□□ -0.23
COL27A1-205ENST00000485397 CIB3Q96Q77 187 aaPredicted RBP13.63□□□□□ -0.23
COL27A1-205ENST00000485397 SLC45A2Q9UMX9 530 aa13.63□□□□□ -0.23
COL27A1-205ENST00000485397 TMED3Q9Y3Q3 217 aa13.63□□□□□ -0.23
COL27A1-205ENST00000485397 MED14OSP0DP75 135 aa13.62□□□□□ -0.23
COL27A1-205ENST00000485397 DAD1P61803 113 aa13.62□□□□□ -0.23
COL27A1-205ENST00000485397 RPP30P78346 268 aaKnown RBP13.62□□□□□ -0.23
COL27A1-205ENST00000485397 PPP1R1AQ13522 171 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms