RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-240ENST00000484412 TUBA4BQ9H853 241 aa10.37□□□□□ -0.75
HDLBP-240ENST00000484412 DNAH9Q9NYC9 4486 aa10.37□□□□□ -0.75
HDLBP-240ENST00000484412 IGHV3OR16-13A0A075B7E8 117 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 ELOA3CA0A087WX78 387 aaPredicted RBP10.36□□□□□ -0.75
HDLBP-240ENST00000484412 IGHV3-74A0A0B4J1X5 117 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 IGSF23A1L1A6 192 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 RBMY1BA6NDE4 496 aaKnown RBP10.36□□□□□ -0.75
HDLBP-240ENST00000484412 RBMY1EA6NEQ0 496 aaKnown RBP10.36□□□□□ -0.75
HDLBP-240ENST00000484412 ZNF98A6NK75 572 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 AGPAT2O15120 278 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 CST7O76096 145 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 RBMY1DP0C7P1 496 aaKnown RBP10.36□□□□□ -0.75
HDLBP-240ENST00000484412 S100A10P60903 97 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 PRR20EP86478 221 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 PRR20CP86479 221 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 PRR20DP86480 221 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 PRR20BP86481 221 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 PRR20AP86496 221 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 HAGHQ16775 308 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 SAMD13Q5VXD3 122 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 CITED4Q96RK1 184 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 TMEM147Q9BVK8 224 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 MED28Q9H204 178 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 UQCC1Q9NVA1 299 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 OR5AC2Q9NZP5 309 aa10.36□□□□□ -0.75
HDLBP-240ENST00000484412 LOC102724200A0A096LPH7 203 aaPredicted RBP10.35□□□□□ -0.75
HDLBP-240ENST00000484412 DNASE2O00115 360 aaPredicted RBP10.35□□□□□ -0.75
HDLBP-240ENST00000484412 UBE2CO00762 179 aa10.35□□□□□ -0.75
HDLBP-240ENST00000484412 LINC00869P0C866 280 aa10.35□□□□□ -0.75
HDLBP-240ENST00000484412 CXCL3P19876 107 aa10.35□□□□□ -0.75
HDLBP-240ENST00000484412 RRAS2P62070 204 aaPredicted RBP10.35□□□□□ -0.75
HDLBP-240ENST00000484412 NHLH2Q02577 135 aa10.35□□□□□ -0.75
HDLBP-240ENST00000484412 FGL1Q08830 312 aa10.35□□□□□ -0.75
HDLBP-240ENST00000484412 ZNF546Q86UE3 836 aa10.35□□□□□ -0.75
HDLBP-240ENST00000484412 OR11H7Q8NGC8 314 aa10.35□□□□□ -0.75
HDLBP-240ENST00000484412 NRN1Q9NPD7 142 aa10.35□□□□□ -0.75
HDLBP-240ENST00000484412 HYPMO75409 117 aa10.34□□□□□ -0.75
HDLBP-240ENST00000484412 GATA2P23769 480 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-240ENST00000484412 LYZP61626 148 aa10.34□□□□□ -0.75
HDLBP-240ENST00000484412 OR2F1Q13607 317 aa10.34□□□□□ -0.75
HDLBP-240ENST00000484412 PATE2Q6UY27 113 aa10.34□□□□□ -0.75
HDLBP-240ENST00000484412 SIGLEC15Q6ZMC9 328 aa10.34□□□□□ -0.75
HDLBP-240ENST00000484412 OR1B1Q8NGR6 318 aa10.34□□□□□ -0.75
HDLBP-240ENST00000484412 MGST2Q99735 147 aa10.34□□□□□ -0.75
HDLBP-240ENST00000484412 SHANK2-AS3Q9BTD1 123 aa10.34□□□□□ -0.75
HDLBP-240ENST00000484412 SRD5A3Q9H8P0 318 aa10.34□□□□□ -0.75
HDLBP-240ENST00000484412 MAP6D1Q9H9H5 199 aa10.34□□□□□ -0.75
HDLBP-240ENST00000484412 IGHV3-66A0A0C4DH42 116 aa10.33□□□□□ -0.76
HDLBP-240ENST00000484412 SMCO3A2RU48 225 aa10.33□□□□□ -0.76
HDLBP-240ENST00000484412 ORM2P19652 201 aa10.33□□□□□ -0.76
HDLBP-240ENST00000484412 CAMLGP49069 296 aa10.33□□□□□ -0.76
HDLBP-240ENST00000484412 MEOX2P50222 304 aa10.33□□□□□ -0.76
HDLBP-240ENST00000484412 RAP2BP61225 183 aa10.33□□□□□ -0.76
HDLBP-240ENST00000484412 EWSR1Q01844 656 aaKnown RBP eCLIP10.33□□□□□ -0.76
HDLBP-240ENST00000484412 FCN2Q15485 313 aa10.33□□□□□ -0.76
HDLBP-240ENST00000484412 Q6ZRG5 221 aa10.33□□□□□ -0.76
HDLBP-240ENST00000484412 Q6ZWC4 215 aa10.33□□□□□ -0.76
HDLBP-240ENST00000484412 WFDC3Q8IUB2 231 aa10.33□□□□□ -0.76
HDLBP-240ENST00000484412 CLUHP3Q96NS8 147 aa10.33□□□□□ -0.76
HDLBP-240ENST00000484412 PBDC1Q9BVG4 233 aa10.33□□□□□ -0.76
HDLBP-240ENST00000484412 PARD6GQ9BYG4 376 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-240ENST00000484412 SLC25A39Q9BZJ4 359 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-240ENST00000484412 ZMAT4Q9H898 229 aa10.33□□□□□ -0.76
HDLBP-240ENST00000484412 H3BRN7 92 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 SOCS3O14543 225 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 GIPP09681 153 aaPredicted RBP10.32□□□□□ -0.76
HDLBP-240ENST00000484412 RPL12P30050 165 aaKnown RBP10.32□□□□□ -0.76
HDLBP-240ENST00000484412 RPL11P62913 178 aaKnown RBP10.32□□□□□ -0.76
HDLBP-240ENST00000484412 OR8I2Q8N0Y5 310 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 GBGT1Q8N5D6 347 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 TMEM217Q8N7C4 229 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 OR5C1Q8NGR4 320 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 THAP6Q8TBB0 222 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 TMEM37Q8WXS4 190 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 C17orf77Q96MU5 243 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 SPATA25Q9BR10 227 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 GGTLC1Q9BX51 225 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 ARV1Q9H2C2 271 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 DNAJC4Q9NNZ3 241 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 HIGD1AQ9Y241 93 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 TP53TG1Q9Y2A0 90 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 HSPB11Q9Y547 144 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 SELENOKQ9Y6D0 94 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 U3KQK5 164 aa10.32□□□□□ -0.76
HDLBP-240ENST00000484412 TGP01266 2768 aa10.31□□□□□ -0.76
HDLBP-240ENST00000484412 MRPS12O15235 138 aaKnown RBP10.31□□□□□ -0.76
HDLBP-240ENST00000484412 RPL7P18124 248 aaKnown RBP10.31□□□□□ -0.76
HDLBP-240ENST00000484412 OPCMLQ14982 345 aa10.31□□□□□ -0.76
HDLBP-240ENST00000484412 LRRC37A5PQ49AS3 106 aa10.31□□□□□ -0.76
HDLBP-240ENST00000484412 GATAD1Q8WUU5 269 aa10.31□□□□□ -0.76
HDLBP-240ENST00000484412 ISLRO14498 428 aa10.3□□□□□ -0.76
HDLBP-240ENST00000484412 ID1P41134 155 aa10.3□□□□□ -0.76
HDLBP-240ENST00000484412 GALR1P47211 349 aa10.3□□□□□ -0.76
HDLBP-240ENST00000484412 APOC4P55056 127 aa10.3□□□□□ -0.76
HDLBP-240ENST00000484412 DEFB131AP59861 70 aa10.3□□□□□ -0.76
HDLBP-240ENST00000484412 SNRPD3P62318 126 aaKnown RBP10.3□□□□□ -0.76
HDLBP-240ENST00000484412 SPATA31B1PQ5VZV4 182 aa10.3□□□□□ -0.76
HDLBP-240ENST00000484412 FAM24BQ8N5W8 94 aa10.3□□□□□ -0.76
HDLBP-240ENST00000484412 STXBP6Q8NFX7 210 aa10.3□□□□□ -0.76
HDLBP-240ENST00000484412 OR1L4Q8NGR5 311 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms