RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 SNRPGP15A8MWD9 76 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 TOMM40O96008 361 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 IGHV3-48P01763 117 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 P2RY1P47900 373 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 TFPI2P48307 235 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 RND2P52198 227 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 TCTAP57738 103 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 RBMS2Q15434 407 aaKnown RBP4.54□□□□□ -1.68
PTCD3-215ENST00000484203 DEFB135Q30KP9 77 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 TRIQKQ629K1 86 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 TMED4Q7Z7H5 227 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 LYG2Q86SG7 212 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 STHQ8IWL8 128 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 GBGT1Q8N5D6 347 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 OR51G1Q8NGK1 321 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 LHFPL5Q8TAF8 219 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 NPIPB3Q92617 1050 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 ZNF414Q96IQ9 312 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 SLC35E1Q96K37 410 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 RARRES2Q99969 163 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 C1QTNF4Q9BXJ3 329 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 C11orf68Q9H3H3 251 aaKnown RBP4.54□□□□□ -1.68
PTCD3-215ENST00000484203 NDUFA13Q9P0J0 144 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 RNF24Q9Y225 148 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 IGKV3-7A0A075B6H7 116 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 IGHV3OR16-13A0A075B7E8 117 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 IGHV3-49A0A0A0MS15 119 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 IGHV3-74A0A0B4J1X5 117 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 ZFP92A6NM28 416 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 K7EQG2 157 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 CA1P00915 261 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-215ENST00000484203 IFNA21P01568 189 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 IL4P05112 153 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 RPL35AP18077 110 aaKnown RBP4.53□□□□□ -1.68
PTCD3-215ENST00000484203 ID1P41134 155 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 DEFB131AP59861 70 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 TIGITQ495A1 244 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 SPATA31B1PQ5VZV4 182 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 GGNBP1Q5YKI7 109 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 CEMP1Q6PRD7 247 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-215ENST00000484203 LYZL2Q7Z4W2 148 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 CCDC190Q86UF4 302 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 APRG1Q8IVJ8 170 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 STXBP6Q8NFX7 210 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 COQ8AQ8NI60 647 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 TRIM63Q969Q1 353 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 ACY3Q96HD9 319 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 C7orf50Q9BRJ6 194 aaKnown RBP4.53□□□□□ -1.68
PTCD3-215ENST00000484203 NRN1Q9NPD7 142 aa4.53□□□□□ -1.68
PTCD3-215ENST00000484203 DYNC2H1Q8NCM8 4307 aaKnown RBP4.53□□□□□ -1.68
PTCD3-215ENST00000484203 RYR3Q15413 4870 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 A0A0J9YWU9 116 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 C11orf94C9JXX5 98 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 BUB3O43684 328 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 PITX3O75364 302 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 SFT2D2O95562 160 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 MIFP14174 115 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 MEOX2P50222 304 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 SUPT4H1P63272 117 aaKnown RBP4.52□□□□□ -1.69
PTCD3-215ENST00000484203 DHRS2Q13268 280 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 C16orf54Q6UWD8 224 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 SIGLEC15Q6ZMC9 328 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 OR11H2Q8NH07 326 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 DCANP1Q8TF63 244 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 RNF125Q96EQ8 232 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 GPR82Q96P67 336 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 TRGV9Q99603 122 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 HRH4Q9H3N8 390 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 RBKSQ9H477 322 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 SELENOKQ9Y6D0 94 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 V9GYH0 126 aa4.52□□□□□ -1.69
PTCD3-215ENST00000484203 IGHV3-66A0A0C4DH42 116 aa4.51□□□□□ -1.69
PTCD3-215ENST00000484203 WRBO00258 174 aa4.51□□□□□ -1.69
PTCD3-215ENST00000484203 SYNGR2O43760 224 aa4.51□□□□□ -1.69
PTCD3-215ENST00000484203 NXPH3O95157 252 aa4.51□□□□□ -1.69
PTCD3-215ENST00000484203 APOHP02749 345 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-215ENST00000484203 ZNF688P0C7X2 276 aa4.51□□□□□ -1.69
PTCD3-215ENST00000484203 PSG1P11464 419 aa4.51□□□□□ -1.69
PTCD3-215ENST00000484203 NKX2-1P43699 371 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-215ENST00000484203 GAMTQ14353 236 aa4.51□□□□□ -1.69
PTCD3-215ENST00000484203 LEMD1Q68G75 181 aa4.51□□□□□ -1.69
PTCD3-215ENST00000484203 TRPT1Q86TN4 253 aaKnown RBP4.51□□□□□ -1.69
PTCD3-215ENST00000484203 C11orf45Q8TAV5 145 aa4.51□□□□□ -1.69
PTCD3-215ENST00000484203 GLMPQ8WWB7 406 aa4.51□□□□□ -1.69
PTCD3-215ENST00000484203 PPP1R14BQ96C90 147 aa4.51□□□□□ -1.69
PTCD3-215ENST00000484203 SRRQ9GZT4 340 aa4.51□□□□□ -1.69
PTCD3-215ENST00000484203 MRPL36Q9P0J6 103 aaKnown RBP4.51□□□□□ -1.69
PTCD3-215ENST00000484203 STRAPQ9Y3F4 350 aaKnown RBP4.51□□□□□ -1.69
PTCD3-215ENST00000484203 TEX48A0A1B0GUV7 120 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 TMEM189A5PLL7 270 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 SMIM9A6NGZ8 99 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 FNDC10F2Z333 226 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 ISLRO14498 428 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 NDUFB6O95139 128 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 GALR1P47211 349 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 PSMB3P49720 205 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 TAS2R30P59541 319 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 SELENOTP62341 195 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 PPP1R1AQ13522 171 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 USF2Q15853 346 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms