RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 LYRM2Q9NU23 88 aaPredicted RBP7.42□□□□□ -1.22
CPSF4-213ENST00000484112 ALMS1Q8TCU4 4167 aa7.41□□□□□ -1.22
CPSF4-213ENST00000484112 IGKV1OR2-108A0A075B7D4 117 aa7.41□□□□□ -1.22
CPSF4-213ENST00000484112 SSNA1O43805 119 aa7.41□□□□□ -1.22
CPSF4-213ENST00000484112 APOHP02749 345 aaPredicted RBP7.41□□□□□ -1.22
CPSF4-213ENST00000484112 METTL15P1P0C7V9 234 aa7.41□□□□□ -1.22
CPSF4-213ENST00000484112 PET100P0DJ07 73 aa7.41□□□□□ -1.22
CPSF4-213ENST00000484112 S100A11P31949 105 aa7.41□□□□□ -1.22
CPSF4-213ENST00000484112 HBG1P69891 147 aa7.41□□□□□ -1.22
CPSF4-213ENST00000484112 HBG2P69892 147 aa7.41□□□□□ -1.22
CPSF4-213ENST00000484112 ZNF90Q03938 601 aa7.41□□□□□ -1.22
CPSF4-213ENST00000484112 TEPPQ6URK8 271 aa7.41□□□□□ -1.22
CPSF4-213ENST00000484112 STX12Q86Y82 276 aa7.41□□□□□ -1.22
CPSF4-213ENST00000484112 RPP25LQ8N5L8 163 aaKnown RBP7.41□□□□□ -1.22
CPSF4-213ENST00000484112 OVOL2Q9BRP0 275 aa7.41□□□□□ -1.22
CPSF4-213ENST00000484112 MS4A6AQ9H2W1 248 aa7.41□□□□□ -1.22
CPSF4-213ENST00000484112 C11orf1Q9H5F2 150 aa7.41□□□□□ -1.22
CPSF4-213ENST00000484112 LSM5Q9Y4Y9 91 aaKnown RBP7.41□□□□□ -1.22
CPSF4-213ENST00000484112 LOC102724200A0A096LPH7 203 aaPredicted RBP7.4□□□□□ -1.22
CPSF4-213ENST00000484112 IGHV3-49A0A0A0MS15 119 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 A0A0J9YWU9 116 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 NUPR2A6NF83 97 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 E5RGE8 158 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 BOLA2-SMG1P6H3BVE0 249 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 DNASE2O00115 360 aaPredicted RBP7.4□□□□□ -1.22
CPSF4-213ENST00000484112 GOSR2O14653 212 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 SULT1A1P50225 295 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 CAV2P51636 162 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 PLP1P60201 277 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 S100A10P60903 97 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 RPL11P62913 178 aaKnown RBP7.4□□□□□ -1.22
CPSF4-213ENST00000484112 RAB31Q13636 194 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 RAB32Q13637 225 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 ATP6V1FQ16864 119 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 ZNF546Q86UE3 836 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 GLMPQ8WWB7 406 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 ASB13Q8WXK3 278 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 GPR82Q96P67 336 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 GGTLC1Q9BX51 225 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 ALG5Q9Y673 324 aa7.4□□□□□ -1.22
CPSF4-213ENST00000484112 IGHV3OR16-13A0A075B7E8 117 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 IGHV3-74A0A0B4J1X5 117 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 KIR2DL5BA0A0G2JN68 375 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 KIR2DL5BA0A0G2JPC4 375 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 SMCO3A2RU48 225 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 UBE2CO00762 179 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 APOC4P55056 127 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 LYZP61626 148 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 EWSR1Q01844 656 aaKnown RBP eCLIP7.39□□□□□ -1.23
CPSF4-213ENST00000484112 BAXQ07812 192 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 VWC2Q2TAL6 325 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 ODF3L2Q3SX64 289 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 CEMP1Q6PRD7 247 aaPredicted RBP7.39□□□□□ -1.23
CPSF4-213ENST00000484112 SIGLEC15Q6ZMC9 328 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 CYP2G1PQ6ZSU1 146 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 KIR2DL5AQ8N109 375 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 LILRB2Q8N423 598 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 TMEM252Q8N6L7 170 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 STPG3Q8N7X2 389 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 KIR2DL5BQ8NHK3 375 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 PBDC1Q9BVG4 233 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 SLC25A31Q9H0C2 315 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 NRN1Q9NPD7 142 aa7.39□□□□□ -1.23
CPSF4-213ENST00000484112 IGHV3-66A0A0C4DH42 116 aa7.38□□□□□ -1.23
CPSF4-213ENST00000484112 K7EQG2 157 aa7.38□□□□□ -1.23
CPSF4-213ENST00000484112 MPDU1O75352 247 aa7.38□□□□□ -1.23
CPSF4-213ENST00000484112 CCNKO75909 580 aa7.38□□□□□ -1.23
CPSF4-213ENST00000484112 MEOX2P50222 304 aa7.38□□□□□ -1.23
CPSF4-213ENST00000484112 H2BFSP57053 126 aa7.38□□□□□ -1.23
CPSF4-213ENST00000484112 RRAS2P62070 204 aaPredicted RBP7.38□□□□□ -1.23
CPSF4-213ENST00000484112 SNRPD3P62318 126 aaKnown RBP7.38□□□□□ -1.23
CPSF4-213ENST00000484112 CD300CQ08708 224 aa7.38□□□□□ -1.23
CPSF4-213ENST00000484112 SLC38A11Q08AI6 406 aa7.38□□□□□ -1.23
CPSF4-213ENST00000484112 TCTE3Q8IZS6 198 aa7.38□□□□□ -1.23
CPSF4-213ENST00000484112 DCANP1Q8TF63 244 aa7.38□□□□□ -1.23
CPSF4-213ENST00000484112 ST6GAL2Q96JF0 529 aa7.38□□□□□ -1.23
CPSF4-213ENST00000484112 TMEM147Q9BVK8 224 aa7.38□□□□□ -1.23
CPSF4-213ENST00000484112 UQCC1Q9NVA1 299 aa7.38□□□□□ -1.23
CPSF4-213ENST00000484112 KLK5Q9Y337 293 aaPredicted RBP7.38□□□□□ -1.23
CPSF4-213ENST00000484112 ELOA3CA0A087WX78 387 aaPredicted RBP7.37□□□□□ -1.23
CPSF4-213ENST00000484112 FAM24AA6NFZ4 105 aa7.37□□□□□ -1.23
CPSF4-213ENST00000484112 HYPMO75409 117 aa7.37□□□□□ -1.23
CPSF4-213ENST00000484112 RAP2BP61225 183 aa7.37□□□□□ -1.23
CPSF4-213ENST00000484112 OR2F1Q13607 317 aa7.37□□□□□ -1.23
CPSF4-213ENST00000484112 Q6ZWC4 215 aa7.37□□□□□ -1.23
CPSF4-213ENST00000484112 GBGT1Q8N5D6 347 aa7.37□□□□□ -1.23
CPSF4-213ENST00000484112 STXBP6Q8NFX7 210 aa7.37□□□□□ -1.23
CPSF4-213ENST00000484112 OR1B1Q8NGR6 318 aa7.37□□□□□ -1.23
CPSF4-213ENST00000484112 PPP1R1CQ8WVI7 109 aa7.37□□□□□ -1.23
CPSF4-213ENST00000484112 MAP6D1Q9H9H5 199 aa7.37□□□□□ -1.23
CPSF4-213ENST00000484112 TP53TG1Q9Y2A0 90 aa7.37□□□□□ -1.23
CPSF4-213ENST00000484112 IGKV3-7A0A075B6H7 116 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 ZNF98A6NK75 572 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 AGPAT2O15120 278 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 SPRY2O43597 315 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 CST7O76096 145 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 SIX6O95475 246 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 MPC2O95563 127 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 LINC00869P0C866 280 aa7.36□□□□□ -1.23
CPSF4-213ENST00000484112 ORM2P19652 201 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms