RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 GINS3Q9BRX5 216 aa10.72□□□□□ -0.69
SRSF6-202ENST00000483871 MRPL27Q9P0M9 148 aaKnown RBP10.72□□□□□ -0.69
SRSF6-202ENST00000483871 CFDP00746 253 aaPredicted RBP10.71□□□□□ -0.69
SRSF6-202ENST00000483871 CRYBB3P26998 211 aa10.71□□□□□ -0.69
SRSF6-202ENST00000483871 ELLP55199 621 aaPredicted RBP10.71□□□□□ -0.69
SRSF6-202ENST00000483871 PLP1P60201 277 aa10.71□□□□□ -0.69
SRSF6-202ENST00000483871 METTL26Q96S19 204 aa10.71□□□□□ -0.69
SRSF6-202ENST00000483871 ELOVL1Q9BW60 279 aa10.71□□□□□ -0.69
SRSF6-202ENST00000483871 ARV1Q9H2C2 271 aa10.71□□□□□ -0.69
SRSF6-202ENST00000483871 SLC25A32Q9H2D1 315 aa10.71□□□□□ -0.69
SRSF6-202ENST00000483871 VSIRQ9H7M9 311 aa10.71□□□□□ -0.69
SRSF6-202ENST00000483871 RABAC1Q9UI14 185 aa10.71□□□□□ -0.69
SRSF6-202ENST00000483871 IGHV7-4-1A0A0J9YVY3 117 aa10.7□□□□□ -0.7
SRSF6-202ENST00000483871 SEC14L6B5MCN3 397 aa10.7□□□□□ -0.7
SRSF6-202ENST00000483871 HYPMO75409 117 aa10.7□□□□□ -0.7
SRSF6-202ENST00000483871 SAP30O75446 220 aa10.7□□□□□ -0.7
SRSF6-202ENST00000483871 FFAR4Q5NUL3 377 aa10.7□□□□□ -0.7
SRSF6-202ENST00000483871 ST8SIA2Q92186 375 aa10.7□□□□□ -0.7
SRSF6-202ENST00000483871 RHPN1-AS1Q9BWJ2 59 aa10.7□□□□□ -0.7
SRSF6-202ENST00000483871 MLXQ9UH92 298 aa10.7□□□□□ -0.7
SRSF6-202ENST00000483871 SMPXQ9UHP9 88 aa10.7□□□□□ -0.7
SRSF6-202ENST00000483871 PKD1L1Q8TDX9 2849 aa10.7□□□□□ -0.7
SRSF6-202ENST00000483871 CHEK1O14757 476 aa10.69□□□□□ -0.7
SRSF6-202ENST00000483871 C8orf88P0DMB2 117 aa10.69□□□□□ -0.7
SRSF6-202ENST00000483871 MORN5Q5VZ52 161 aa10.69□□□□□ -0.7
SRSF6-202ENST00000483871 LEMD1Q68G75 181 aa10.69□□□□□ -0.7
SRSF6-202ENST00000483871 DNAJC4Q9NNZ3 241 aa10.69□□□□□ -0.7
SRSF6-202ENST00000483871 TIMM9Q9Y5J7 89 aa10.69□□□□□ -0.7
SRSF6-202ENST00000483871 U3KQE9 123 aa10.69□□□□□ -0.7
SRSF6-202ENST00000483871 BUB3O43684 328 aa10.69□□□□□ -0.7
SRSF6-202ENST00000483871 COX7A2P2O60397 106 aa10.69□□□□□ -0.7
SRSF6-202ENST00000483871 EIF3GO75821 320 aaKnown RBP eCLIP10.69□□□□□ -0.7
SRSF6-202ENST00000483871 OXLD1Q5BKU9 147 aa10.69□□□□□ -0.7
SRSF6-202ENST00000483871 LINC00305Q7Z4B0 112 aa10.69□□□□□ -0.7
SRSF6-202ENST00000483871 BAP18Q8IXM2 172 aa10.69□□□□□ -0.7
SRSF6-202ENST00000483871 OR2G3Q8NGZ4 309 aa10.69□□□□□ -0.7
SRSF6-202ENST00000483871 RNF2Q99496 336 aa10.69□□□□□ -0.7
SRSF6-202ENST00000483871 SLC25A39Q9BZJ4 359 aaPredicted RBP10.69□□□□□ -0.7
SRSF6-202ENST00000483871 HIGD1AQ9Y241 93 aa10.69□□□□□ -0.7
SRSF6-202ENST00000483871 SPP1P10451 314 aa10.68□□□□□ -0.7
SRSF6-202ENST00000483871 PRR31Q5SQ13 230 aa10.68□□□□□ -0.7
SRSF6-202ENST00000483871 C10orf113Q5VZT2 155 aa10.68□□□□□ -0.7
SRSF6-202ENST00000483871 SPATA31B1PQ5VZV4 182 aa10.68□□□□□ -0.7
SRSF6-202ENST00000483871 SLC51BQ86UW2 128 aa10.68□□□□□ -0.7
SRSF6-202ENST00000483871 GNPNAT1Q96EK6 184 aaPredicted RBP10.68□□□□□ -0.7
SRSF6-202ENST00000483871 PSMG3Q9BT73 122 aaPredicted RBP10.68□□□□□ -0.7
SRSF6-202ENST00000483871 SCRT1Q9BWW7 348 aa10.68□□□□□ -0.7
SRSF6-202ENST00000483871 SLC25A22Q9H936 323 aa10.68□□□□□ -0.7
SRSF6-202ENST00000483871 SEPSECSQ9HD40 501 aaKnown RBP10.68□□□□□ -0.7
SRSF6-202ENST00000483871 SIGLEC8Q9NYZ4 499 aa10.68□□□□□ -0.7
SRSF6-202ENST00000483871 PLA2G2EQ9NZK7 142 aa10.68□□□□□ -0.7
SRSF6-202ENST00000483871 ELOA3CA0A087WX78 387 aaPredicted RBP10.67□□□□□ -0.7
SRSF6-202ENST00000483871 ZNF98A6NK75 572 aa10.67□□□□□ -0.7
SRSF6-202ENST00000483871 TPT1P13693 172 aaKnown RBP10.67□□□□□ -0.7
SRSF6-202ENST00000483871 RAB2AP61019 212 aa10.67□□□□□ -0.7
SRSF6-202ENST00000483871 DEFB114Q30KQ6 69 aa10.67□□□□□ -0.7
SRSF6-202ENST00000483871 PXDC1Q5TGL8 231 aa10.67□□□□□ -0.7
SRSF6-202ENST00000483871 FAM78BQ5VT40 261 aa10.67□□□□□ -0.7
SRSF6-202ENST00000483871 OR1L4Q8NGR5 311 aa10.67□□□□□ -0.7
SRSF6-202ENST00000483871 MARC2Q969Z3 335 aa10.67□□□□□ -0.7
SRSF6-202ENST00000483871 KCNIP2Q9NS61 270 aa10.67□□□□□ -0.7
SRSF6-202ENST00000483871 IGKV3-7A0A075B6H7 116 aa10.66□□□□□ -0.7
SRSF6-202ENST00000483871 TRAV5A0A0B4J249 113 aa10.66□□□□□ -0.7
SRSF6-202ENST00000483871 H3BRN7 92 aa10.66□□□□□ -0.7
SRSF6-202ENST00000483871 SERF2P84101 59 aa10.66□□□□□ -0.7
SRSF6-202ENST00000483871 CD300EQ496F6 205 aaPredicted RBP10.66□□□□□ -0.7
SRSF6-202ENST00000483871 C9orf66Q5T8R8 295 aa10.66□□□□□ -0.7
SRSF6-202ENST00000483871 STOML3Q8TAV4 291 aa10.66□□□□□ -0.7
SRSF6-202ENST00000483871 DYNLRB2Q8TF09 96 aa10.66□□□□□ -0.7
SRSF6-202ENST00000483871 GATAD1Q8WUU5 269 aa10.66□□□□□ -0.7
SRSF6-202ENST00000483871 SHANK2-AS3Q9BTD1 123 aa10.66□□□□□ -0.7
SRSF6-202ENST00000483871 A0A1W2PS18 150 aa10.66□□□□□ -0.7
SRSF6-202ENST00000483871 IZUMO1RA6ND01 250 aa10.66□□□□□ -0.7
SRSF6-202ENST00000483871 M6PRP20645 277 aa10.66□□□□□ -0.7
SRSF6-202ENST00000483871 ACOT6Q3I5F7 207 aaPredicted RBP10.66□□□□□ -0.7
SRSF6-202ENST00000483871 C16orf54Q6UWD8 224 aa10.66□□□□□ -0.7
SRSF6-202ENST00000483871 MIR17HGQ75NE6 70 aa10.66□□□□□ -0.7
SRSF6-202ENST00000483871 TMED6Q8WW62 240 aa10.66□□□□□ -0.7
SRSF6-202ENST00000483871 NARS2Q96I59 477 aaKnown RBP10.66□□□□□ -0.7
SRSF6-202ENST00000483871 PFDN5Q99471 154 aa10.66□□□□□ -0.7
SRSF6-202ENST00000483871 MCRIP2Q9BUT9 160 aaKnown RBP10.66□□□□□ -0.7
SRSF6-202ENST00000483871 IGLV1-51P01701 117 aa10.65□□□□□ -0.7
SRSF6-202ENST00000483871 SNRPCP09234 159 aaKnown RBP10.65□□□□□ -0.7
SRSF6-202ENST00000483871 SEC11BP0C7V7 166 aa10.65□□□□□ -0.7
SRSF6-202ENST00000483871 C4BPBP20851 252 aa10.65□□□□□ -0.7
SRSF6-202ENST00000483871 EIF5AP63241 154 aaKnown RBP10.65□□□□□ -0.7
SRSF6-202ENST00000483871 FAM90A2PQ658T7 463 aa10.65□□□□□ -0.7
SRSF6-202ENST00000483871 OR8I2Q8N0Y5 310 aa10.65□□□□□ -0.7
SRSF6-202ENST00000483871 RPP25LQ8N5L8 163 aaKnown RBP10.65□□□□□ -0.7
SRSF6-202ENST00000483871 OR10G4Q8NGN3 311 aa10.65□□□□□ -0.7
SRSF6-202ENST00000483871 OR10G9Q8NGN4 311 aa10.65□□□□□ -0.7
SRSF6-202ENST00000483871 OR10G7Q8NGN6 311 aa10.65□□□□□ -0.7
SRSF6-202ENST00000483871 GLMPQ8WWB7 406 aa10.65□□□□□ -0.7
SRSF6-202ENST00000483871 RPRMQ9NS64 109 aa10.65□□□□□ -0.7
SRSF6-202ENST00000483871 G3V4G9 280 aa10.64□□□□□ -0.71
SRSF6-202ENST00000483871 HMGB3O15347 200 aaKnown RBP10.64□□□□□ -0.71
SRSF6-202ENST00000483871 RPL11P62913 178 aaKnown RBP10.64□□□□□ -0.71
SRSF6-202ENST00000483871 FAM122CQ6P4D5 195 aa10.64□□□□□ -0.71
SRSF6-202ENST00000483871 TCF24Q7RTU0 167 aa10.64□□□□□ -0.71
SRSF6-202ENST00000483871 TMEM61Q8N0U2 210 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms