RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 PLP1P60201 277 aa13.29□□□□□ -0.28
HDAC6-225ENST00000483506 SELENOTP62341 195 aa13.29□□□□□ -0.28
HDAC6-225ENST00000483506 ZNF124Q15973 351 aa13.29□□□□□ -0.28
HDAC6-225ENST00000483506 CYP2G1PQ6ZSU1 146 aa13.29□□□□□ -0.28
HDAC6-225ENST00000483506 NMES1Q9C002 83 aa13.29□□□□□ -0.28
HDAC6-225ENST00000483506 NRN1Q9NPD7 142 aa13.29□□□□□ -0.28
HDAC6-225ENST00000483506 FBXL17Q9UF56 701 aa13.29□□□□□ -0.28
HDAC6-225ENST00000483506 GOSR2O14653 212 aa13.28□□□□□ -0.28
HDAC6-225ENST00000483506 PTTG1O95997 202 aa13.28□□□□□ -0.28
HDAC6-225ENST00000483506 GATA2P23769 480 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-225ENST00000483506 CAV2P51636 162 aa13.28□□□□□ -0.28
HDAC6-225ENST00000483506 S100A10P60903 97 aa13.28□□□□□ -0.28
HDAC6-225ENST00000483506 TEPPQ6URK8 271 aa13.28□□□□□ -0.28
HDAC6-225ENST00000483506 Q6ZWC4 215 aa13.28□□□□□ -0.28
HDAC6-225ENST00000483506 TP53TG1Q9Y2A0 90 aa13.28□□□□□ -0.28
HDAC6-225ENST00000483506 FAM24AA6NFZ4 105 aa13.27□□□□□ -0.29
HDAC6-225ENST00000483506 BCAP31P51572 246 aa13.27□□□□□ -0.29
HDAC6-225ENST00000483506 CYCSP99999 105 aaKnown RBP13.27□□□□□ -0.29
HDAC6-225ENST00000483506 OVOL2Q9BRP0 275 aa13.27□□□□□ -0.29
HDAC6-225ENST00000483506 SIX6O95475 246 aa13.26□□□□□ -0.29
HDAC6-225ENST00000483506 ZNF688P0C7X2 276 aa13.26□□□□□ -0.29
HDAC6-225ENST00000483506 RPL35AP18077 110 aaKnown RBP13.26□□□□□ -0.29
HDAC6-225ENST00000483506 S100A7P31151 101 aa13.26□□□□□ -0.29
HDAC6-225ENST00000483506 SULT1A1P50225 295 aa13.26□□□□□ -0.29
HDAC6-225ENST00000483506 H2BFSP57053 126 aa13.26□□□□□ -0.29
HDAC6-225ENST00000483506 SLC38A11Q08AI6 406 aa13.26□□□□□ -0.29
HDAC6-225ENST00000483506 VWC2Q2TAL6 325 aa13.26□□□□□ -0.29
HDAC6-225ENST00000483506 TMEM252Q8N6L7 170 aa13.26□□□□□ -0.29
HDAC6-225ENST00000483506 IGSF23A1L1A6 192 aa13.25□□□□□ -0.29
HDAC6-225ENST00000483506 ZNF98A6NK75 572 aa13.25□□□□□ -0.29
HDAC6-225ENST00000483506 CST7O76096 145 aa13.25□□□□□ -0.29
HDAC6-225ENST00000483506 LINC00869P0C866 280 aa13.25□□□□□ -0.29
HDAC6-225ENST00000483506 LEMD1Q68G75 181 aa13.25□□□□□ -0.29
HDAC6-225ENST00000483506 PPP1R14BQ96C90 147 aa13.25□□□□□ -0.29
HDAC6-225ENST00000483506 TMEM147Q9BVK8 224 aa13.25□□□□□ -0.29
HDAC6-225ENST00000483506 H3BRN7 92 aa13.24□□□□□ -0.29
HDAC6-225ENST00000483506 SOCS3O14543 225 aa13.24□□□□□ -0.29
HDAC6-225ENST00000483506 ORM2P19652 201 aa13.24□□□□□ -0.29
HDAC6-225ENST00000483506 S100A11P31949 105 aa13.24□□□□□ -0.29
HDAC6-225ENST00000483506 SNRPD3P62318 126 aaKnown RBP13.24□□□□□ -0.29
HDAC6-225ENST00000483506 PXDC1Q5TGL8 231 aa13.24□□□□□ -0.29
HDAC6-225ENST00000483506 ZNF546Q86UE3 836 aa13.24□□□□□ -0.29
HDAC6-225ENST00000483506 STX12Q86Y82 276 aa13.24□□□□□ -0.29
HDAC6-225ENST00000483506 OR8I2Q8N0Y5 310 aa13.24□□□□□ -0.29
HDAC6-225ENST00000483506 OR1B1Q8NGR6 318 aa13.24□□□□□ -0.29
HDAC6-225ENST00000483506 MGST2Q99735 147 aa13.24□□□□□ -0.29
HDAC6-225ENST00000483506 CSTL1Q9H114 145 aa13.24□□□□□ -0.29
HDAC6-225ENST00000483506 C3orf84H3BNL1 204 aa13.23□□□□□ -0.29
HDAC6-225ENST00000483506 AGPAT2O15120 278 aa13.23□□□□□ -0.29
HDAC6-225ENST00000483506 SSNA1O43805 119 aa13.23□□□□□ -0.29
HDAC6-225ENST00000483506 HYPMO75409 117 aa13.23□□□□□ -0.29
HDAC6-225ENST00000483506 TRPT1Q86TN4 253 aaKnown RBP13.23□□□□□ -0.29
HDAC6-225ENST00000483506 TMEM217Q8N7C4 229 aa13.23□□□□□ -0.29
HDAC6-225ENST00000483506 MUC7Q8TAX7 377 aa13.23□□□□□ -0.29
HDAC6-225ENST00000483506 RNF183Q96D59 192 aa13.23□□□□□ -0.29
HDAC6-225ENST00000483506 GPR82Q96P67 336 aa13.23□□□□□ -0.29
HDAC6-225ENST00000483506 SHANK2-AS3Q9BTD1 123 aa13.23□□□□□ -0.29
HDAC6-225ENST00000483506 SLC25A39Q9BZJ4 359 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-225ENST00000483506 SLC25A32Q9H2D1 315 aa13.23□□□□□ -0.29
HDAC6-225ENST00000483506 UQCC1Q9NVA1 299 aa13.23□□□□□ -0.29
HDAC6-225ENST00000483506 HIGD1AQ9Y241 93 aa13.23□□□□□ -0.29
HDAC6-225ENST00000483506 WDR83OSQ9Y284 106 aa13.23□□□□□ -0.29
HDAC6-225ENST00000483506 CSMD3Q7Z407 3707 aa13.23□□□□□ -0.29
HDAC6-225ENST00000483506 AGRNO00468 2067 aa13.22□□□□□ -0.29
HDAC6-225ENST00000483506 E5RGE8 158 aa13.22□□□□□ -0.29
HDAC6-225ENST00000483506 H0YIZ8 118 aa13.22□□□□□ -0.29
HDAC6-225ENST00000483506 SPRY2O43597 315 aa13.22□□□□□ -0.29
HDAC6-225ENST00000483506 RLN2P04090 185 aa13.22□□□□□ -0.29
HDAC6-225ENST00000483506 GALR1P47211 349 aa13.22□□□□□ -0.29
HDAC6-225ENST00000483506 HBG1P69891 147 aa13.22□□□□□ -0.29
HDAC6-225ENST00000483506 HBG2P69892 147 aa13.22□□□□□ -0.29
HDAC6-225ENST00000483506 DEFB135Q30KP9 77 aa13.22□□□□□ -0.29
HDAC6-225ENST00000483506 PSMG4Q5JS54 123 aa13.22□□□□□ -0.29
HDAC6-225ENST00000483506 SAMD13Q5VXD3 122 aa13.22□□□□□ -0.29
HDAC6-225ENST00000483506 C17orf77Q96MU5 243 aa13.22□□□□□ -0.29
HDAC6-225ENST00000483506 OR5AC2Q9NZP5 309 aa13.22□□□□□ -0.29
HDAC6-225ENST00000483506 PSMB3P49720 205 aa13.21□□□□□ -0.29
HDAC6-225ENST00000483506 MEOX2P50222 304 aa13.21□□□□□ -0.29
HDAC6-225ENST00000483506 RAP2BP61225 183 aa13.21□□□□□ -0.29
HDAC6-225ENST00000483506 ATP6V1FQ16864 119 aa13.21□□□□□ -0.29
HDAC6-225ENST00000483506 PATE2Q6UY27 113 aa13.21□□□□□ -0.29
HDAC6-225ENST00000483506 S100A7AQ86SG5 101 aa13.21□□□□□ -0.29
HDAC6-225ENST00000483506 STHQ8IWL8 128 aa13.21□□□□□ -0.29
HDAC6-225ENST00000483506 CHAC2Q8WUX2 184 aa13.21□□□□□ -0.29
HDAC6-225ENST00000483506 PPP1R1CQ8WVI7 109 aa13.21□□□□□ -0.29
HDAC6-225ENST00000483506 SCRT1Q9BWW7 348 aa13.21□□□□□ -0.29
HDAC6-225ENST00000483506 SLC25A22Q9H936 323 aa13.21□□□□□ -0.29
HDAC6-225ENST00000483506 DOK5Q9P104 306 aa13.21□□□□□ -0.29
HDAC6-225ENST00000483506 ALG5Q9Y673 324 aa13.21□□□□□ -0.29
HDAC6-225ENST00000483506 ISLRO14498 428 aa13.2□□□□□ -0.3
HDAC6-225ENST00000483506 ID1P41134 155 aa13.2□□□□□ -0.3
HDAC6-225ENST00000483506 GATAD1Q8WUU5 269 aa13.2□□□□□ -0.3
HDAC6-225ENST00000483506 SLC25A31Q9H0C2 315 aa13.2□□□□□ -0.3
HDAC6-225ENST00000483506 ARL6Q9H0F7 186 aa13.2□□□□□ -0.3
HDAC6-225ENST00000483506 KNCNA6PVL3 124 aa13.19□□□□□ -0.3
HDAC6-225ENST00000483506 OR5G3P0C626 314 aa13.19□□□□□ -0.3
HDAC6-225ENST00000483506 SPP1P10451 314 aa13.19□□□□□ -0.3
HDAC6-225ENST00000483506 CAMLGP49069 296 aa13.19□□□□□ -0.3
HDAC6-225ENST00000483506 PRR20EP86478 221 aa13.19□□□□□ -0.3
HDAC6-225ENST00000483506 PRR20CP86479 221 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms