RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 BMPR1BO00238 502 aa9.68□□□□□ -0.86
TSPAN1-208ENST00000482928 OR7C2O60412 319 aa9.68□□□□□ -0.86
TSPAN1-208ENST00000482928 C8orf88P0DMB2 117 aa9.68□□□□□ -0.86
TSPAN1-208ENST00000482928 PEA15Q15121 130 aa9.68□□□□□ -0.86
TSPAN1-208ENST00000482928 KHDC1LQ5JSQ8 128 aa9.68□□□□□ -0.86
TSPAN1-208ENST00000482928 UQCC3Q6UW78 93 aa9.68□□□□□ -0.86
TSPAN1-208ENST00000482928 LINC00305Q7Z4B0 112 aa9.68□□□□□ -0.86
TSPAN1-208ENST00000482928 LYPD6BQ8NI32 183 aa9.68□□□□□ -0.86
TSPAN1-208ENST00000482928 CCDC140Q96MF4 163 aa9.68□□□□□ -0.86
TSPAN1-208ENST00000482928 KLK15Q9H2R5 256 aa9.68□□□□□ -0.86
TSPAN1-208ENST00000482928 SEPSECSQ9HD40 501 aaKnown RBP9.68□□□□□ -0.86
TSPAN1-208ENST00000482928 PUS1Q9Y606 427 aaKnown RBP eCLIP9.68□□□□□ -0.86
TSPAN1-208ENST00000482928 EIF3GO75821 320 aaKnown RBP eCLIP9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 CTSGP08311 255 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 ARL14EPLP0DKL9 152 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 PSMB8P28062 276 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 TAGLN2P37802 199 aaKnown RBP9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 PSMB3P49720 205 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 PLP1P60201 277 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 GUK1Q16774 197 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 HAGHQ16775 308 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 TOR2AQ5JU69 321 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 PQLC2Q6ZP29 291 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 LCNL1Q6ZST4 164 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 MIR17HGQ75NE6 70 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 SSX7Q7RTT5 188 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 KLHDC1Q8N7A1 406 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 STXBP6Q8NFX7 210 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 FAM210AQ96ND0 272 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 CHRDL1Q9BU40 450 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 MANBALQ9NQG1 85 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 RABAC1Q9UI14 185 aa9.67□□□□□ -0.86
TSPAN1-208ENST00000482928 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 RBFOX3A6NFN3 312 aa9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 PPP5D1E7EU14 171 aa9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 F8W735 103 aaPredicted RBP9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 I3L521 148 aa9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 OR2C1O95371 312 aa9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 RPLP1P05386 114 aaKnown RBP9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 STAG3L2P0CL84 134 aa9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 STAG3L3P0CL85 134 aa9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 SPATA31B1PQ5VZV4 182 aa9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 OR5AU1Q8NGC0 362 aa9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 OR4F5Q8NH21 305 aa9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 TMEM37Q8WXS4 190 aa9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 UHRF2Q96PU4 802 aa9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 OR5B12Q96R08 314 aa9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 TMEM167BQ9NRX6 74 aa9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 SERTAD4Q9NUC0 356 aa9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 PEF1Q9UBV8 284 aaKnown RBP9.66□□□□□ -0.86
TSPAN1-208ENST00000482928 IGHV3-35A0A0C4DH35 117 aa9.65□□□□□ -0.86
TSPAN1-208ENST00000482928 WI2-2373I1.2A0A1W2PRP0 233 aa9.65□□□□□ -0.86
TSPAN1-208ENST00000482928 GGCTO75223 188 aaKnown RBP9.65□□□□□ -0.86
TSPAN1-208ENST00000482928 S100A1P23297 94 aa9.65□□□□□ -0.86
TSPAN1-208ENST00000482928 GCHFRP30047 84 aa9.65□□□□□ -0.86
TSPAN1-208ENST00000482928 UBE2L3P68036 154 aaKnown RBP9.65□□□□□ -0.86
TSPAN1-208ENST00000482928 CCL20P78556 96 aa9.65□□□□□ -0.86
TSPAN1-208ENST00000482928 PRR31Q5SQ13 230 aa9.65□□□□□ -0.86
TSPAN1-208ENST00000482928 ZNF343Q6P1L6 599 aa9.65□□□□□ -0.86
TSPAN1-208ENST00000482928 ZNF491Q8N8L2 437 aa9.65□□□□□ -0.86
TSPAN1-208ENST00000482928 METTL26Q96S19 204 aa9.65□□□□□ -0.86
TSPAN1-208ENST00000482928 PAXXQ9BUH6 204 aa9.65□□□□□ -0.86
TSPAN1-208ENST00000482928 C20orf24Q9BUV8 137 aa9.65□□□□□ -0.86
TSPAN1-208ENST00000482928 C16orf95Q9H693 158 aa9.65□□□□□ -0.86
TSPAN1-208ENST00000482928 NDUFA7O95182 113 aa9.64□□□□□ -0.87
TSPAN1-208ENST00000482928 BCL2P10415 239 aa9.64□□□□□ -0.87
TSPAN1-208ENST00000482928 ADMP35318 185 aa9.64□□□□□ -0.87
TSPAN1-208ENST00000482928 CST9LP1Q5W188 147 aa9.64□□□□□ -0.87
TSPAN1-208ENST00000482928 C10orf99Q6UWK7 81 aa9.64□□□□□ -0.87
TSPAN1-208ENST00000482928 PATE2Q6UY27 113 aa9.64□□□□□ -0.87
TSPAN1-208ENST00000482928 EIF4E3Q8N5X7 224 aaKnown RBP9.64□□□□□ -0.87
TSPAN1-208ENST00000482928 UBE2E2Q96LR5 201 aa9.64□□□□□ -0.87
TSPAN1-208ENST00000482928 SLC25A39Q9BZJ4 359 aaPredicted RBP9.64□□□□□ -0.87
TSPAN1-208ENST00000482928 TMPRSS5Q9H3S3 457 aa9.64□□□□□ -0.87
TSPAN1-208ENST00000482928 TMEM231Q9H6L2 316 aa9.64□□□□□ -0.87
TSPAN1-208ENST00000482928 VAX2Q9UIW0 290 aa9.64□□□□□ -0.87
TSPAN1-208ENST00000482928 TENM1Q9UKZ4 2725 aa9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 TRAV5A0A0B4J249 113 aa9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 LOC102723971A0A1B0GUV8 181 aa9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 ZNF320A2RRD8 509 aa9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 NDUFA4O00483 81 aa9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 LGALS1P09382 135 aaKnown RBP9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 RPEL1Q2QD12 228 aa9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 FAM106AQ4KMX7 169 aa9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 TOMM20LQ6UXN7 152 aa9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 C3orf56Q8N813 242 aa9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 OR4F17Q8NGA8 305 aa9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 RXFP4Q8TDU9 374 aa9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 OR4F4Q96R69 305 aa9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 SHANK2-AS3Q9BTD1 123 aa9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 SLC25A2Q9BXI2 301 aa9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 OR51M1Q9H341 326 aa9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 SMDT1Q9H4I9 107 aa9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 MRPL27Q9P0M9 148 aaKnown RBP9.63□□□□□ -0.87
TSPAN1-208ENST00000482928 KRBOX1C9JBD0 128 aa9.62□□□□□ -0.87
TSPAN1-208ENST00000482928 H3BRN7 92 aa9.62□□□□□ -0.87
TSPAN1-208ENST00000482928 PAGE4O60829 102 aa9.62□□□□□ -0.87
TSPAN1-208ENST00000482928 OR10J4P0C629 311 aa9.62□□□□□ -0.87
TSPAN1-208ENST00000482928 NPPCP23582 126 aa9.62□□□□□ -0.87
TSPAN1-208ENST00000482928 CEBPGP53567 150 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms