RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 SIGLEC15Q6ZMC9 328 aa12.35□□□□□ -0.43
HMGN1-214ENST00000482733 S100A7AQ86SG5 101 aa12.35□□□□□ -0.43
HMGN1-214ENST00000482733 ZNF546Q86UE3 836 aa12.35□□□□□ -0.43
HMGN1-214ENST00000482733 WFDC3Q8IUB2 231 aa12.35□□□□□ -0.43
HMGN1-214ENST00000482733 STXBP6Q8NFX7 210 aa12.35□□□□□ -0.43
HMGN1-214ENST00000482733 TMEM147Q9BVK8 224 aa12.35□□□□□ -0.43
HMGN1-214ENST00000482733 UQCC1Q9NVA1 299 aa12.35□□□□□ -0.43
HMGN1-214ENST00000482733 HUWE1Q7Z6Z7 4374 aaKnown RBP12.34□□□□□ -0.43
HMGN1-214ENST00000482733 LOC102724200A0A096LPH7 203 aaPredicted RBP12.34□□□□□ -0.43
HMGN1-214ENST00000482733 RBMY1BA6NDE4 496 aaKnown RBP12.34□□□□□ -0.43
HMGN1-214ENST00000482733 RBMY1EA6NEQ0 496 aaKnown RBP12.34□□□□□ -0.43
HMGN1-214ENST00000482733 RBMY1DP0C7P1 496 aaKnown RBP12.34□□□□□ -0.43
HMGN1-214ENST00000482733 ORM2P19652 201 aa12.34□□□□□ -0.43
HMGN1-214ENST00000482733 GATA2P23769 480 aaPredicted RBP12.34□□□□□ -0.43
HMGN1-214ENST00000482733 PLP1P60201 277 aa12.34□□□□□ -0.43
HMGN1-214ENST00000482733 VWC2Q2TAL6 325 aa12.34□□□□□ -0.43
HMGN1-214ENST00000482733 TMEM182Q6ZP80 229 aaPredicted RBP12.34□□□□□ -0.43
HMGN1-214ENST00000482733 TM2D3Q9BRN9 247 aa12.34□□□□□ -0.43
HMGN1-214ENST00000482733 GGTLC1Q9BX51 225 aa12.34□□□□□ -0.43
HMGN1-214ENST00000482733 MED28Q9H204 178 aa12.34□□□□□ -0.43
HMGN1-214ENST00000482733 OR5AC2Q9NZP5 309 aa12.34□□□□□ -0.43
HMGN1-214ENST00000482733 U3KQK5 164 aa12.34□□□□□ -0.43
HMGN1-214ENST00000482733 H0YIZ8 118 aa12.33□□□□□ -0.44
HMGN1-214ENST00000482733 K7EQG2 157 aa12.33□□□□□ -0.44
HMGN1-214ENST00000482733 HYPMO75409 117 aa12.33□□□□□ -0.44
HMGN1-214ENST00000482733 MPC2O95563 127 aa12.33□□□□□ -0.44
HMGN1-214ENST00000482733 LINC00869P0C866 280 aa12.33□□□□□ -0.44
HMGN1-214ENST00000482733 RAP2BP61225 183 aa12.33□□□□□ -0.44
HMGN1-214ENST00000482733 BAXQ07812 192 aa12.33□□□□□ -0.44
HMGN1-214ENST00000482733 OXA1LQ15070 435 aa12.33□□□□□ -0.44
HMGN1-214ENST00000482733 PXDC1Q5TGL8 231 aa12.33□□□□□ -0.44
HMGN1-214ENST00000482733 OR1B1Q8NGR6 318 aa12.33□□□□□ -0.44
HMGN1-214ENST00000482733 DCANP1Q8TF63 244 aa12.33□□□□□ -0.44
HMGN1-214ENST00000482733 SPATA25Q9BR10 227 aa12.33□□□□□ -0.44
HMGN1-214ENST00000482733 MAP6D1Q9H9H5 199 aa12.33□□□□□ -0.44
HMGN1-214ENST00000482733 SEPSECSQ9HD40 501 aaKnown RBP12.33□□□□□ -0.44
HMGN1-214ENST00000482733 NRN1Q9NPD7 142 aa12.33□□□□□ -0.44
HMGN1-214ENST00000482733 AGPAT2O15120 278 aa12.32□□□□□ -0.44
HMGN1-214ENST00000482733 EWSR1Q01844 656 aaKnown RBP eCLIP12.32□□□□□ -0.44
HMGN1-214ENST00000482733 OR8I2Q8N0Y5 310 aa12.32□□□□□ -0.44
HMGN1-214ENST00000482733 CITED4Q96RK1 184 aa12.32□□□□□ -0.44
HMGN1-214ENST00000482733 RNF24Q9Y225 148 aa12.32□□□□□ -0.44
HMGN1-214ENST00000482733 HIGD1AQ9Y241 93 aa12.32□□□□□ -0.44
HMGN1-214ENST00000482733 WDR83OSQ9Y284 106 aa12.32□□□□□ -0.44
HMGN1-214ENST00000482733 ZNF98A6NK75 572 aa12.31□□□□□ -0.44
HMGN1-214ENST00000482733 CAMLGP49069 296 aa12.31□□□□□ -0.44
HMGN1-214ENST00000482733 STPG3Q8N7X2 389 aa12.31□□□□□ -0.44
HMGN1-214ENST00000482733 ASB13Q8WXK3 278 aa12.31□□□□□ -0.44
HMGN1-214ENST00000482733 GPR82Q96P67 336 aa12.31□□□□□ -0.44
HMGN1-214ENST00000482733 MGST2Q99735 147 aa12.31□□□□□ -0.44
HMGN1-214ENST00000482733 RNF126Q9BV68 326 aa12.31□□□□□ -0.44
HMGN1-214ENST00000482733 COL7A1Q02388 2944 aa12.31□□□□□ -0.44
HMGN1-214ENST00000482733 MPDU1O75352 247 aa12.3□□□□□ -0.44
HMGN1-214ENST00000482733 OR5G3P0C626 314 aa12.3□□□□□ -0.44
HMGN1-214ENST00000482733 CXCL3P19876 107 aa12.3□□□□□ -0.44
HMGN1-214ENST00000482733 GALR1P47211 349 aa12.3□□□□□ -0.44
HMGN1-214ENST00000482733 APOC4P55056 127 aa12.3□□□□□ -0.44
HMGN1-214ENST00000482733 DEFB131AP59861 70 aa12.3□□□□□ -0.44
HMGN1-214ENST00000482733 SNRPD3P62318 126 aaKnown RBP12.3□□□□□ -0.44
HMGN1-214ENST00000482733 FCN2Q15485 313 aa12.3□□□□□ -0.44
HMGN1-214ENST00000482733 SAMD13Q5VXD3 122 aa12.3□□□□□ -0.44
HMGN1-214ENST00000482733 APRG1Q8IVJ8 170 aa12.3□□□□□ -0.44
HMGN1-214ENST00000482733 RCHY1Q96PM5 261 aa12.3□□□□□ -0.44
HMGN1-214ENST00000482733 SLC25A39Q9BZJ4 359 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-214ENST00000482733 ARL6Q9H0F7 186 aa12.3□□□□□ -0.44
HMGN1-214ENST00000482733 DOK5Q9P104 306 aa12.3□□□□□ -0.44
HMGN1-214ENST00000482733 UBE2L5PA0A1B0GUS4 154 aa12.29□□□□□ -0.44
HMGN1-214ENST00000482733 NHLH2Q02577 135 aa12.29□□□□□ -0.44
HMGN1-214ENST00000482733 Q6ZRG5 221 aa12.29□□□□□ -0.44
HMGN1-214ENST00000482733 FAM24BQ8N5W8 94 aa12.29□□□□□ -0.44
HMGN1-214ENST00000482733 OR11H7Q8NGC8 314 aa12.29□□□□□ -0.44
HMGN1-214ENST00000482733 OR5C1Q8NGR4 320 aa12.29□□□□□ -0.44
HMGN1-214ENST00000482733 CHAC2Q8WUX2 184 aa12.29□□□□□ -0.44
HMGN1-214ENST00000482733 SHANK2-AS3Q9BTD1 123 aa12.29□□□□□ -0.44
HMGN1-214ENST00000482733 SLC25A22Q9H936 323 aa12.29□□□□□ -0.44
HMGN1-214ENST00000482733 ELOA3CA0A087WX78 387 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-214ENST00000482733 KIR2DL5BA0A0G2JN68 375 aa12.28□□□□□ -0.44
HMGN1-214ENST00000482733 KIR2DL5BA0A0G2JPC4 375 aa12.28□□□□□ -0.44
HMGN1-214ENST00000482733 H3BRN7 92 aa12.28□□□□□ -0.44
HMGN1-214ENST00000482733 UBE2CO00762 179 aa12.28□□□□□ -0.44
HMGN1-214ENST00000482733 ZNF688P0C7X2 276 aa12.28□□□□□ -0.44
HMGN1-214ENST00000482733 ID1P41134 155 aa12.28□□□□□ -0.44
HMGN1-214ENST00000482733 MEOX2P50222 304 aa12.28□□□□□ -0.44
HMGN1-214ENST00000482733 KIR2DL5AQ8N109 375 aa12.28□□□□□ -0.44
HMGN1-214ENST00000482733 KIR2DL5BQ8NHK3 375 aa12.28□□□□□ -0.44
HMGN1-214ENST00000482733 THAP6Q8TBB0 222 aa12.28□□□□□ -0.44
HMGN1-214ENST00000482733 SLC25A32Q9H2D1 315 aa12.28□□□□□ -0.44
HMGN1-214ENST00000482733 MBD2Q9UBB5 411 aa12.28□□□□□ -0.44
HMGN1-214ENST00000482733 COX7A2P2O60397 106 aa12.27□□□□□ -0.45
HMGN1-214ENST00000482733 GIPP09681 153 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-214ENST00000482733 LYL1P12980 280 aa12.27□□□□□ -0.45
HMGN1-214ENST00000482733 RPL7P18124 248 aaKnown RBP12.27□□□□□ -0.45
HMGN1-214ENST00000482733 FGF7P21781 194 aa12.27□□□□□ -0.45
HMGN1-214ENST00000482733 RPL12P30050 165 aaKnown RBP12.27□□□□□ -0.45
HMGN1-214ENST00000482733 RPL29P47914 159 aaKnown RBP12.27□□□□□ -0.45
HMGN1-214ENST00000482733 FGL1Q08830 312 aa12.27□□□□□ -0.45
HMGN1-214ENST00000482733 ARV1Q9H2C2 271 aa12.27□□□□□ -0.45
HMGN1-214ENST00000482733 RPL35AP18077 110 aaKnown RBP12.26□□□□□ -0.45
HMGN1-214ENST00000482733 PRR20EP86478 221 aa12.26□□□□□ -0.45
HMGN1-214ENST00000482733 PRR20CP86479 221 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms